Arc (activity regulated cytoskeletal-associated protein) - Rat Genome Database

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Gene: Arc (activity regulated cytoskeletal-associated protein) Mus musculus
Analyze
Symbol: Arc
Name: activity regulated cytoskeletal-associated protein
RGD ID: 62329
MGI Page MGI
Description: Predicted to have mRNA binding activity. Involved in several processes, including long-term memory; regulation of postsynaptic neurotransmitter receptor internalization; and regulation of synaptic plasticity. Localizes to several cellular components, including dendritic spine; glutamatergic synapse; and neuronal ribonucleoprotein granule. Is expressed in several structures, including central nervous system; extraembryonic component; metanephros; pancreas mesenchyme; and retina. Orthologous to human ARC (activity regulated cytoskeleton associated protein); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,2',3,3',6,6'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: activity-regulated cytoskeleton-associated protein; activity-regulated gene 3.1 protein homolog; ARC/ARG3.1; Arc3; Arc3.1; arg3.1; C86064; mArc
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391574,540,930 - 74,544,419 (-)NCBIGRCm39mm39
GRCm39 Ensembl1574,540,932 - 74,544,419 (-)Ensembl
GRCm381574,669,081 - 74,672,570 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1574,669,083 - 74,672,570 (-)EnsemblGRCm38mm10GRCm38
MGSCv371574,499,513 - 74,503,000 (-)NCBIGRCm37mm9NCBIm37
MGSCv361574,496,338 - 74,499,825 (-)NCBImm8
Celera1576,173,822 - 76,177,304 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1534.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(25R)-cholest-5-ene-3beta,26-diol  (ISO)
(S)-amphetamine  (ISO)
(S)-nicotine  (ISO)
1,2,4-trimethylbenzene  (ISO)
1,2-dimethylhydrazine  (EXP,ISO)
15-acetyldeoxynivalenol  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',3,3',6,6'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
26-hydroxycholesterol  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,5,6,7-TETRABROMOBENZOTRIAZOLE  (EXP)
6-propyl-2-thiouracil  (ISO)
8-OH-DPAT  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
all-trans-retinoic acid  (ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bicuculline  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
butanal  (ISO)
cerium trichloride  (EXP)
chlorpyrifos  (ISO)
choline  (EXP)
cisplatin  (ISO)
Citreoviridin  (EXP)
clozapine  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
CU-O LINKAGE  (ISO)
desipramine  (ISO)
Diacetoxyscirpenol  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
dieldrin  (ISO)
disulfiram  (ISO)
endosulfan  (ISO)
ethanol  (EXP,ISO)
fluoxetine  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
furosemide  (ISO)
genistein  (EXP)
glufosinate  (EXP)
glycidol  (ISO)
graphite  (ISO)
haloperidol  (ISO)
isoflurane  (ISO)
kainic acid  (EXP,ISO)
L-methionine  (EXP)
lead diacetate  (ISO)
mercury dichloride  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (EXP,ISO)
methylphenidate  (ISO)
monosodium L-glutamate  (EXP)
N-[2-[4-(2-methoxyphenyl)-1-piperazinyl]ethyl]-N-(2-pyridinyl)cyclohexanecarboxamide  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
naphthalenes  (ISO)
nicotine  (ISO)
paracetamol  (EXP)
paroxetine  (ISO)
pentanal  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
poly(I:C)  (ISO)
progesterone  (ISO)
propanal  (ISO)
propofol  (ISO)
reserpine  (ISO)
resveratrol  (ISO)
SCH 23390  (ISO)
scopolamine  (ISO)
sevoflurane  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
SKF 38393  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
Soman  (ISO)
sulfur dioxide  (ISO)
tetradecane  (ISO)
tetrodotoxin  (EXP)
thimerosal  (ISO)
tranylcypromine  (ISO)
triazolam  (EXP)
triptonide  (EXP)
undecane  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:9226373   PMID:10349636   PMID:10725249   PMID:10727859   PMID:10862698   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11466419   PMID:12466851  
PMID:12477932   PMID:12493697   PMID:12617955   PMID:12663748   PMID:12763607   PMID:12876470   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16237173   PMID:16287845   PMID:16602821  
PMID:16873068   PMID:17088210   PMID:17088211   PMID:17088213   PMID:18230676   PMID:18554416   PMID:18614030   PMID:18782777   PMID:19074532   PMID:19116276   PMID:19208628   PMID:19455133  
PMID:19556514   PMID:19559013   PMID:20211139   PMID:20228806   PMID:20452974   PMID:20505084   PMID:20550627   PMID:20653942   PMID:20694003   PMID:20806412   PMID:20817066   PMID:20921410  
PMID:21187403   PMID:21315255   PMID:21334422   PMID:21371562   PMID:21497182   PMID:21559295   PMID:21873635   PMID:22036569   PMID:22179607   PMID:22579289   PMID:22922786   PMID:22928932  
PMID:23413876   PMID:23424281   PMID:23598246   PMID:23749147   PMID:23764283   PMID:23791196   PMID:23891993   PMID:23897647   PMID:23936366   PMID:24012642   PMID:24094104   PMID:24431439  
PMID:24487590   PMID:24623780   PMID:24758170   PMID:24806683   PMID:24857654   PMID:24945773   PMID:24952961   PMID:24991962   PMID:25031392   PMID:25450958   PMID:25589774   PMID:25783003  
PMID:25797218   PMID:25802982   PMID:25848016   PMID:25864631   PMID:26051420   PMID:26464982   PMID:26563879   PMID:26843652   PMID:26848828   PMID:26880136   PMID:27038743   PMID:27106802  
PMID:27160884   PMID:27365296   PMID:27488634   PMID:27507650   PMID:27524619   PMID:27567310   PMID:27880914   PMID:27995769   PMID:28589041   PMID:28621665   PMID:28648498   PMID:28659282  
PMID:28667669   PMID:28671696   PMID:28706196   PMID:28729244   PMID:28765602   PMID:28790183   PMID:28798046   PMID:28804447   PMID:28901289   PMID:28963515   PMID:29045836   PMID:29087327  
PMID:29135807   PMID:29142056   PMID:29162813   PMID:29264923   PMID:29328916   PMID:29386356   PMID:29444425   PMID:29635031   PMID:29861284   PMID:29893745   PMID:29912851   PMID:29983316  
PMID:30279480   PMID:30344042   PMID:30442670   PMID:30536651   PMID:30584064   PMID:30761730   PMID:30786014   PMID:31110186   PMID:31151856   PMID:31229633   PMID:31488612   PMID:31682894  
PMID:31904548   PMID:32049025   PMID:32322067   PMID:32350140   PMID:32699218   PMID:33451279  


Genomics

Comparative Map Data
Arc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391574,540,930 - 74,544,419 (-)NCBIGRCm39mm39
GRCm39 Ensembl1574,540,932 - 74,544,419 (-)Ensembl
GRCm381574,669,081 - 74,672,570 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1574,669,083 - 74,672,570 (-)EnsemblGRCm38mm10GRCm38
MGSCv371574,499,513 - 74,503,000 (-)NCBIGRCm37mm9NCBIm37
MGSCv361574,496,338 - 74,499,825 (-)NCBImm8
Celera1576,173,822 - 76,177,304 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1534.25NCBI
ARC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl8142,611,049 - 142,614,479 (-)EnsemblGRCh38hg38GRCh38
GRCh388142,611,049 - 142,614,479 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh378143,692,410 - 143,695,840 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368143,689,412 - 143,692,835 (-)NCBINCBI36hg18NCBI36
Build 348143,689,411 - 143,692,835NCBI
Celera8140,003,980 - 140,007,899 (-)NCBI
Cytogenetic Map8q24.3NCBI
HuRef8138,948,085 - 138,951,389 (-)NCBIHuRef
CHM1_18143,732,641 - 143,736,069 (-)NCBICHM1_1
Arc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27106,555,968 - 106,559,697 (-)NCBI
Rnor_6.0 Ensembl7115,907,097 - 115,910,541 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.07115,907,097 - 115,911,059 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07115,812,499 - 115,815,958 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47112,771,937 - 112,775,381 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17112,806,166 - 112,809,611 (-)NCBI
Celera7102,957,256 - 102,960,700 (-)NCBICelera
Cytogenetic Map7q34NCBI
Arc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554541,379,998 - 1,383,414 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554541,379,998 - 1,383,414 (-)NCBIChiLan1.0ChiLan1.0
ARC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.18142,365,962 - 142,369,309 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8142,367,995 - 142,369,185 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v08139,320,366 - 139,323,802 (-)NCBIMhudiblu_PPA_v0panPan3
ARC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11336,743,027 - 36,744,266 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1336,609,093 - 36,612,592 (-)NCBI
ROS_Cfam_1.01337,136,507 - 37,140,000 (-)NCBI
UMICH_Zoey_3.11336,855,275 - 36,858,753 (-)NCBI
UNSW_CanFamBas_1.01336,944,976 - 36,948,432 (-)NCBI
UU_Cfam_GSD_1.01337,366,985 - 37,370,448 (-)NCBI
Arc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053031,759,046 - 1,762,161 (+)NCBI
SpeTri2.0NW_0049364709,185,145 - 9,188,260 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl41,517,980 - 1,521,403 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.141,517,986 - 1,521,403 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ARC
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18136,857,402 - 136,860,933 (-)NCBI
ChlSab1.1 Ensembl8136,859,438 - 136,860,628 (-)Ensembl
Arc
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473513,968,628 - 13,972,026 (+)NCBI

Position Markers
C86064  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381574,669,210 - 74,669,317UniSTSGRCm38
MGSCv371574,499,640 - 74,499,747UniSTSGRCm37
Celera1576,173,949 - 76,174,056UniSTS
Cytogenetic Map15D3UniSTS
cM Map1541.4UniSTS
Whitehead/MRC_RH15624.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined346021278717086Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined346021278717086Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined346021278717086Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15346021278717086Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15346021278717086Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15610000076000000Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15610000076500000Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15610000078800000Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15610000086800000Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156100000100900000Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15690000076000000Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15690000076000000Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15690000084700000Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927293679590561Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402117102988123Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800000102100000Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930000076200000Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578270103517472Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800000086800000Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154230000095600000Mouse
1300644Fob3_mF-line obesity QTL 3 (mouse)11.3Not determined154414443889377036Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154468146478681588Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154498729278987432Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154651779780517996Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154651779780517996Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154743448581434630Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154753774781537842Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154850000098500000Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548500000101800000Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154859351382593647Mouse
1301779Dpml_mdopamine loss (mouse)Not determined155114129876910293Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155128885985288984Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155154651285546662Mouse
10412067Pain2_mpain 2 (mouse)Not determined155177349085773777Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155181398385822600Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155193466685934802Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155370000089700000Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155491728088917280Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556323312103517472Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155690000087800000Mouse
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155724515691245304Mouse
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155724515691245304Mouse
12880420V25Dq8_mvitamin D inactive form serum level QTL 8 (mouse)156170000095700000Mouse
1301601Faq9_mfluctuating asymmetry QTL 9 (mouse)Not determined156327970297279794Mouse
1558786Msq1_mMAV-1 susceptibility QTL 1 (mouse)Not determined156351779781202235Mouse
1302197Bhr2_mbronchial hyperresponsiveness 2 (mouse)Not determined1564434485103517472Mouse
4141135Cia35_mcollagen induced arthritis 35 (mouse)Not determined156492762598927745Mouse
1301119Drb7_mdopamine receptor binding 7 (mouse)Not determined156545237799456827Mouse
1301171Brm2_mbrachyury modifier 2 (mouse)Not determined156564117599641298Mouse
4141921Pstc3_mperiosteal circumference 3 (mouse)Not determined1567386497101386646Mouse
1300627Sluc26_msusceptibility to lung cancer 26 (mouse)Not determined1570461452104043685Mouse
1300726Pitm4_mprion incubation time 4 (mouse)Not determined1570465070104043685Mouse
1300648Dbsty4_mdiabesity 4 (mouse)Not determined1570465070104043685Mouse
25671381Hrsq3_mhost response to SARS QTL 3, eosinophilia (mouse)157227269075972984Mouse
14747011Mancz13_mmandible centroid size 13 (mouse)1572498466104043685Mouse
1300844Emo2_memotionality 2 (mouse)Not determined157250061076910293Mouse
1302002Cocia2_mcocaine induced activation 2 (mouse)Not determined157250061080014977Mouse
12791003Aath8_maortic arch atherosclerosis 8 (mouse)1573545941104043685Mouse
15092079Igly6_mIgG glycosylation 6, GP6 (mouse)157422869182789955Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1833
Count of miRNA genes:435
Interacting mature miRNAs:540
Transcripts:ENSMUST00000023268, ENSMUST00000110009
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000023268   ⟹   ENSMUSP00000023268
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1574,669,083 - 74,672,568 (-)Ensembl
RefSeq Acc Id: ENSMUST00000110009   ⟹   ENSMUSP00000105636
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1574,669,083 - 74,672,570 (-)Ensembl
RefSeq Acc Id: NM_001276684   ⟹   NP_001263613
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391574,540,930 - 74,544,419 (-)NCBI
GRCm381574,669,081 - 74,672,570 (-)NCBI
Celera1576,173,820 - 76,177,304 (-)NCBI
Sequence:
RefSeq Acc Id: NM_018790   ⟹   NP_061260
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391574,540,930 - 74,544,419 (-)NCBI
GRCm381574,669,081 - 74,672,570 (-)NCBI
MGSCv371574,499,513 - 74,503,000 (-)RGD
Celera1576,173,820 - 76,177,304 (-)NCBI
cM Map15 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_061260   ⟸   NM_018790
- UniProtKB: Q9WV31 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001263613   ⟸   NM_001276684
- UniProtKB: Q9WV31 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000105636   ⟸   ENSMUST00000110009
RefSeq Acc Id: ENSMUSP00000023268   ⟸   ENSMUST00000023268

Promoters
RGD ID:6825781
Promoter ID:MM_KWN:18761
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_018790,   OTTMUST00000039452
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361574,501,246 - 74,503,832 (-)MPROMDB
RGD ID:8683948
Promoter ID:EPDNEW_M20005
Type:multiple initiation site
Name:Arc_1
Description:Mus musculus activity regulated cytoskeletal-associated protein, transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381574,672,570 - 74,672,630EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88067 AgrOrtholog
Ensembl Genes ENSMUSG00000022602 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000023268 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000105636 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000023268 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000110009 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro Activity-reg_cytoskelet-assoc UniProtKB/Swiss-Prot
  Arc_C UniProtKB/Swiss-Prot
KEGG Report mmu:11838 UniProtKB/Swiss-Prot
MGD MGI:88067 ENTREZGENE
NCBI Gene 11838 ENTREZGENE
PANTHER PTHR15962 UniProtKB/Swiss-Prot
Pfam Arc_C UniProtKB/Swiss-Prot
PhenoGen Arc PhenoGen
PRINTS ARCARG31 UniProtKB/Swiss-Prot
UniProt ARC_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q9ES15 UniProtKB/Swiss-Prot