Tmsb10 (thymosin, beta 10) - Rat Genome Database
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Gene: Tmsb10 (thymosin, beta 10) Mus musculus
Analyze
Symbol: Tmsb10
Name: thymosin, beta 10
RGD ID: 62314
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; central nervous system; embryo mesenchyme; heart; and sensory organ. Orthologous to human TMSB10 (thymosin beta 10); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Ptmb1; Ptmb10; TB10; thymosin beta-10
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm13588   Gm19248   Gm19249   Gm19250   Gm20570   Gm3788   Gm8034   Gm9844  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39672,934,330 - 72,935,731 (-)NCBIGRCm39mm39
GRCm39 Ensembl672,934,330 - 72,935,731 (-)Ensembl
GRCm38672,957,347 - 72,958,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl672,957,347 - 72,958,748 (-)EnsemblGRCm38mm10GRCm38
MGSCv37672,907,341 - 72,908,742 (-)NCBIGRCm37mm9NCBIm37
MGSCv36672,886,862 - 72,887,908 (-)NCBImm8
Celera675,027,991 - 75,029,392 (-)NCBICelera
Cytogenetic Map6C1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-hydroxypropanoic acid  (ISO)
2-nitrofluorene  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
bacitracin  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (ISO)
bromobenzene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
casticin  (EXP)
chloropicrin  (ISO)
choline  (EXP)
chromium(6+)  (EXP)
cisplatin  (ISO)
clofibric acid  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (EXP)
doxorubicin  (ISO)
ethanol  (EXP)
folic acid  (EXP)
furan  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
griseofulvin  (EXP)
hydralazine  (ISO)
ICI D1694  (ISO)
indole-3-methanol  (ISO)
ketoconazole  (ISO)
L-methionine  (EXP)
lead diacetate  (EXP)
methylparaben  (ISO)
microcystin-LR  (EXP)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nickel sulfate  (ISO)
O-methyleugenol  (ISO)
oxaliplatin  (ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
quercetin  (ISO)
rac-lactic acid  (ISO)
resveratrol  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
sodium arsenite  (ISO)
streptozocin  (ISO)
tamoxifen  (EXP)
tert-butyl hydroperoxide  (EXP)
Tesaglitazar  (ISO)
thapsigargin  (ISO)
thioacetamide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP,ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IC)

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:8925915   PMID:9067931   PMID:9143510   PMID:10349636   PMID:10844592   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11180952   PMID:11895978   PMID:12324571  
PMID:12466851   PMID:12477932   PMID:12882358   PMID:14610273   PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:19233202   PMID:21267068   PMID:21873635   PMID:22158707  
PMID:23451037   PMID:24154525   PMID:24165879   PMID:24623079   PMID:30595499   PMID:30713523   PMID:31241463  


Genomics

Comparative Map Data
Tmsb10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39672,934,330 - 72,935,731 (-)NCBIGRCm39mm39
GRCm39 Ensembl672,934,330 - 72,935,731 (-)Ensembl
GRCm38672,957,347 - 72,958,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl672,957,347 - 72,958,748 (-)EnsemblGRCm38mm10GRCm38
MGSCv37672,907,341 - 72,908,742 (-)NCBIGRCm37mm9NCBIm37
MGSCv36672,886,862 - 72,887,908 (-)NCBImm8
Celera675,027,991 - 75,029,392 (-)NCBICelera
Cytogenetic Map6C1NCBI
TMSB10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl284,905,656 - 84,906,671 (+)EnsemblGRCh38hg38GRCh38
GRCh38284,905,656 - 84,906,671 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37285,132,780 - 85,133,795 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36284,986,274 - 84,987,310 (+)NCBINCBI36hg18NCBI36
Build 34285,044,455 - 85,045,451NCBI
Celera284,961,655 - 84,962,691 (+)NCBI
Cytogenetic Map2p11.2NCBI
HuRef285,028,869 - 85,029,905 (+)NCBIHuRef
CHM1_1285,062,530 - 85,063,566 (+)NCBICHM1_1
Tmsb10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24105,009,959 - 105,011,095 (-)NCBI
Rnor_6.0 Ensembl4100,882,216 - 100,883,275 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04100,882,216 - 100,883,303 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04165,645,783 - 165,646,844 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44106,286,030 - 106,287,089 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14106,530,516 - 106,531,333 (-)NCBI
Celera494,160,243 - 94,161,302 (-)NCBICelera
Cytogenetic Map4q31NCBI
Tmsb10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554242,472,105 - 2,472,499 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554242,471,845 - 2,472,515 (-)NCBIChiLan1.0ChiLan1.0
TMSB10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A86,517,393 - 86,518,050 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A86,517,393 - 86,517,799 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A84,958,267 - 84,959,382 (+)NCBIMhudiblu_PPA_v0panPan3
TMSB10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1740,048,828 - 40,049,470 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11740,048,823 - 40,049,508 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tmsb10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366503,686,995 - 3,688,047 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMSB10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl359,776,235 - 59,777,363 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1359,776,236 - 59,777,252 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2362,820,778 - 62,821,794 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMSB10
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11422,273,951 - 22,274,995 (-)NCBI
Tmsb10
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474918,147,755 - 18,148,834 (-)NCBI

Position Markers
RH126554  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C1UniSTS
Whitehead/MRC_RH13633.8UniSTS
Tmsb10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C1UniSTS
cM Map218.0UniSTS
cM Map7 UniSTS
cM Map6 UniSTS
Tmsb10  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C1UniSTS
cM Map218.0UniSTS
cM Map6 UniSTS
cM Map7 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
12910802Pwbwq12_mpost-weaning body weight QTL 12 (mouse)64382681377811523Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
12910785Pwgrq16_mpost-weaning growth rate QTL 16 (mouse)64382681377811523Mouse
13208564Bmiq7_mbody mass index QTL 7 (mouse)62500000080000000Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
12910807Pwbwq11_mpost-weaning body weight QTL 11 (mouse)64382681377811523Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080600000Mouse
12910820Ogrq3_moverall growth rate QTL 3 (mouse)64382681377811523Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414873387692Mouse
4140983Srilp_msleep response to influenza, light phase (mouse)Not determined4872655675447710Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4141782Mrdq5_mmodifier of retinal degeneration QTL 5 (mouse)Not determined3285065078238974Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
11040601Lmr4a_mleishmaniasis resistance 4a (mouse)64211637376116515Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
11040600Lmr4c_mleishmaniasis resistance 4c (mouse)64211637376116515Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
12880424V25Dq4_mvitamin D inactive form serum level QTL 4 (mouse)64160000075600000Mouse
11533915Mts4_mmammary tumor susceptibility 4 (mouse)64211637376116515Mouse
1301266Lmr4_mleishmaniasis resistance 4 (mouse)Not determined64211637376116515Mouse
12910798Pwgrq5_mpre-weaning growth rate QTL 5 (mouse)64382681377811523Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
12910809Pwbwq10_mpost-weaning body weight QTL 10 (mouse)64382681377811523Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:823
Count of miRNA genes:275
Interacting mature miRNAs:293
Transcripts:ENSMUST00000114048, ENSMUST00000114049, ENSMUST00000114050, ENSMUST00000144337
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001039392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK131711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089326 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC093587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC099374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA466695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB273987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ042349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ042420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z48496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000114048   ⟹   ENSMUSP00000109682
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,957,361 - 72,958,748 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114049   ⟹   ENSMUSP00000109683
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,957,353 - 72,958,302 (-)Ensembl
RefSeq Acc Id: ENSMUST00000114050   ⟹   ENSMUSP00000109684
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,957,347 - 72,958,488 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144337   ⟹   ENSMUSP00000145075
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl672,957,655 - 72,958,399 (-)Ensembl
RefSeq Acc Id: NM_001039392   ⟹   NP_001034481
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,934,330 - 72,935,215 (-)NCBI
GRCm38672,957,347 - 72,958,232 (-)NCBI
MGSCv37672,907,341 - 72,908,742 (-)RGD
Celera675,027,991 - 75,029,392 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190327   ⟹   NP_001177256
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,934,330 - 72,935,731 (-)NCBI
GRCm38672,957,347 - 72,958,748 (-)ENTREZGENE
MGSCv37672,907,341 - 72,908,742 (-)RGD
Celera675,027,991 - 75,029,392 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_025284   ⟹   NP_079560
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39672,934,330 - 72,935,466 (-)NCBI
GRCm38672,957,347 - 72,958,483 (-)NCBI
MGSCv37672,907,341 - 72,908,742 (-)RGD
Celera675,027,991 - 75,029,392 (-)RGD
cM Map6 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_079560   ⟸   NM_025284
- UniProtKB: Q6ZWY8 (UniProtKB/Swiss-Prot),   A6H6H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001034481   ⟸   NM_001039392
- UniProtKB: Q6ZWY8 (UniProtKB/Swiss-Prot),   A6H6H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177256   ⟸   NM_001190327
- UniProtKB: Q6ZWY8 (UniProtKB/Swiss-Prot),   A6H6H4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000145075   ⟸   ENSMUST00000144337
RefSeq Acc Id: ENSMUSP00000109683   ⟸   ENSMUST00000114049
RefSeq Acc Id: ENSMUSP00000109682   ⟸   ENSMUST00000114048
RefSeq Acc Id: ENSMUSP00000109684   ⟸   ENSMUST00000114050

Promoters
RGD ID:6840100
Promoter ID:MM_KWN:46486
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000114048,   ENSMUST00000114049,   ENSMUST00000114050,   OTTMUST00000054973
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36672,908,101 - 72,908,601 (-)MPROMDB
RGD ID:6890044
Promoter ID:EPDNEW_M8473
Type:initiation region
Name:Tmsb10_2
Description:Mus musculus thymosin, beta 10 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8474  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38672,958,134 - 72,958,194EPDNEW
RGD ID:6890046
Promoter ID:EPDNEW_M8474
Type:initiation region
Name:Tmsb10_1
Description:Mus musculus thymosin, beta 10 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8473  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38672,958,400 - 72,958,460EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:109146 AgrOrtholog
Ensembl Genes ENSMUSG00000050347
  ENSMUSG00000079523 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSMUSG00000091955 UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000109682 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000109683 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000109684 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000137210 UniProtKB/Swiss-Prot
  ENSMUSP00000145075 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000114048 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000114049 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000114050 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000144337 UniProtKB/TrEMBL
  ENSMUST00000170837 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.5.520 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Beta-thymosin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Beta-thymosin_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19240 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:109146 ENTREZGENE
NCBI Gene 19240 ENTREZGENE
PANTHER PTHR12021 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Thymosin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tmsb10 PhenoGen
PIRSF Thymosin_beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE THYMOSIN_B4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART THY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SVF0_MOUSE UniProtKB/TrEMBL
  A6H6H4 ENTREZGENE, UniProtKB/TrEMBL
  Q6ZWY8 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary J3QK33 UniProtKB/TrEMBL
  Q3V2M3 UniProtKB/Swiss-Prot