Advanced Search (OLGA)

Gene: Cdc42bpb (CDC42 binding protein kinase beta) Rattus norvegicus

Analyze

Symbol:

Cdc42bpb

Name:

CDC42 binding protein kinase beta

RGD ID:

621753

Description:

Enables protein serine/threonine kinase activity and small GTPase binding activity. Involved in actomyosin structure organization; cell migration; and protein phosphorylation. Located in actomyosin. Orthologous to human CDC42BPB (CDC42 binding protein kinase beta); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CDC42 binding protein kinase beta (DMPK-like); Cdc42-binding protein kinase beta; DMPK-like beta; MRCK beta; myotonic dystrophy kinase-related CDC42-binding kinase beta; myotonic dystrophy protein kinase-like beta; serine/threonine-protein kinase MRCK beta

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CDC42BPB (CDC42 binding protein kinase beta)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Cdc42bpb (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cdc42bpb (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CDC42BPB (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CDC42BPB (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cdc42bpb (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CDC42BPB (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CDC42BPB (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cdc42bpb (CDC42 binding protein kinase beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Cdc42bpb (CDC42 binding protein kinase beta)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CDC42BPB (CDC42 binding protein kinase beta)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cdc42bpb (CDC42 binding protein kinase beta (DMPK-like))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	gek	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	mrck-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cdc42bpb	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cdc42bpb	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	136,154,905 - 136,241,259 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	136,154,905 - 136,237,570 (-)	Ensembl				GRCr8
mRatBN7.2	6	130,333,712 - 130,416,631 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	130,333,712 - 130,416,377 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	130,504,511 - 130,586,328 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	130,800,504 - 130,882,318 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	130,163,771 - 130,246,465 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	135,746,743 - 135,830,144 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	135,746,754 - 135,830,086 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	144,585,365 - 144,667,686 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	136,053,885 - 136,136,234 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	127,890,990 - 127,973,161 (-)	NCBI		Celera
RGSC_v3.1	6	136,061,068 - 136,142,380 (-)	NCBI
Cytogenetic Map	6	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

Charcot-Marie-Tooth disease axonal type 2O (ISO)

CHILTON-OKUR-CHUNG NEURODEVELOPMENTAL SYNDROME (ISO)

genetic disease (ISO)

Imerslund-Grasbeck Syndrome (ISO)

Imerslund-Grasbeck Syndrome 1 (ISO)

Imerslund-Grasbeck Syndrome 2 (ISO)

immunodeficiency 132A (ISO)

megaloblastic anemia (ISO)

mitochondrial complex IV deficiency nuclear type 17 (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3H-1,2-dithiole-3-thione (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

ammonium chloride (EXP)

amphetamine (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

bisphenol F (EXP,ISO)

C60 fullerene (EXP)

cadmium dichloride (ISO)

calcium atom (EXP)

calcium(0) (EXP)

clobetasol (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

coumarin (ISO)

coumestrol (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

dicrotophos (ISO)

flavonoids (EXP)

folic acid (ISO)

FR900359 (ISO)

hexadecanoic acid (ISO)

indometacin (ISO)

ivermectin (ISO)

levonorgestrel (ISO)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

N-nitrosodiethylamine (ISO)

oxaliplatin (ISO)

paracetamol (EXP)

perfluorohexanesulfonic acid (ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

piperonyl butoxide (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

rac-lactic acid (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

testosterone undecanoate (ISO)

thiram (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin cytoskeleton organization (IMP,ISS)

actomyosin structure organization (IBA,IEA,IMP,ISO)

cell migration (IEA,IMP,ISO)

protein phosphorylation (IDA,ISO,ISS)

Cellular Component

actomyosin (IBA,IDA,IEA,ISO)

anchoring junction (IEA)

cell leading edge (ISS)

cell projection (IEA)

cell-cell junction (ISS)

cytoplasm (IBA,IEA)

cytoskeleton (IBA)

lamellipodium (IEA,ISS)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

ATP binding (IEA,ISS)

kinase activity (IEA)

magnesium ion binding (ISS)

metal ion binding (IEA)

nucleotide binding (IEA)

protein binding (IPI,ISO)

protein kinase activity (IEA,ISO)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IBA,IDA,IEA,ISS)

protein-containing complex binding (ISO)

small GTPase binding (IDA)

transferase activity (IEA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Adaptor protein LRAP25 mediates myotonic dystrophy kinase-related Cdc42-binding kinase (MRCK) regulation of LIMK1 protein in lamellipodial F-actin dynamics.	Lee IC, etal., J Biol Chem. 2014 Sep 26;289(39):26989-7003. doi: 10.1074/jbc.M114.588079. Epub 2014 Aug 8.
3.	Myotonic dystrophy kinase-related Cdc42-binding kinase acts as a Cdc42 effector in promoting cytoskeletal reorganization.	Leung T, etal., Mol Cell Biol 1998 Jan;18(1):130-40.
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	GOA pipeline	RGD automated data pipeline
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	A tripartite complex containing MRCK modulates lamellar actomyosin retrograde flow.	Tan I, etal., Cell. 2008 Oct 3;135(1):123-36. doi: 10.1016/j.cell.2008.09.018.

Additional References at PubMed

PMID:19056867	PMID:21949762	PMID:25743393

Genomics

Comparative Map Data

Cdc42bpb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	136,154,905 - 136,241,259 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	136,154,905 - 136,237,570 (-)	Ensembl				GRCr8
mRatBN7.2	6	130,333,712 - 130,416,631 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	130,333,712 - 130,416,377 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	130,504,511 - 130,586,328 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	130,800,504 - 130,882,318 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	130,163,771 - 130,246,465 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	135,746,743 - 135,830,144 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	135,746,754 - 135,830,086 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	144,585,365 - 144,667,686 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	136,053,885 - 136,136,234 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	127,890,990 - 127,973,161 (-)	NCBI		Celera
RGSC_v3.1	6	136,061,068 - 136,142,380 (-)	NCBI
Cytogenetic Map	6	q32	NCBI

CDC42BPB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	102,932,380 - 103,057,549 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	102,932,380 - 103,057,549 (-)	Ensembl			hg38	GRCh38
GRCh37	14	103,398,717 - 103,523,886 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	102,468,469 - 102,593,495 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	102,468,469 - 102,593,552	NCBI
Celera	14	83,452,838 - 83,577,854 (-)	NCBI		Celera
Cytogenetic Map	14	q32.32	NCBI
HuRef	14	83,573,751 - 83,698,598 (-)	NCBI		HuRef
CHM1_1	14	103,336,156 - 103,461,595 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	97,168,625 - 97,293,800 (-)	NCBI		T2T-CHM13v2.0

Cdc42bpb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	111,259,406 - 111,347,985 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	111,259,410 - 111,344,152 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	111,292,972 - 111,379,313 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	111,292,976 - 111,377,718 (-)	Ensembl			mm10	GRCm38
MGSCv37	12	112,531,183 - 112,615,929 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	111,740,787 - 111,825,167 (-)	NCBI		MGSCv36	mm8
Celera	12	112,487,034 - 112,573,080 (-)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	60.94	NCBI

Cdc42bpb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955538	2,024,776 - 2,113,211 (-)	Ensembl
ChiLan1.0	NW_004955538	2,023,681 - 2,113,213 (-)	NCBI	ChiLan1.0	ChiLan1.0

CDC42BPB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	104,084,676 - 104,212,688 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	103,301,174 - 103,429,186 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	83,551,870 - 83,679,888 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	103,367,060 - 103,447,382 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	103,367,060 - 103,451,989 (-)	Ensembl			panPan2	panpan1.1

CDC42BPB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	70,809,943 - 70,915,922 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	70,811,023 - 71,033,324 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	70,322,386 - 70,428,050 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	71,087,229 - 71,192,642 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	71,087,236 - 71,193,245 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	70,750,905 - 70,856,255 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	70,815,280 - 70,920,989 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	71,215,615 - 71,320,970 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cdc42bpb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	3,169,826 - 3,219,970 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936835	975,960 - 1,026,025 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936835	975,941 - 1,026,046 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CDC42BPB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	7	128,824,316 - 128,887,793 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CDC42BPB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	80,894,777 - 81,024,998 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666053	68,085,087 - 68,224,199 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cdc42bpb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	1,623,956 - 1,722,309 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624734	1,624,001 - 1,718,427 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Cdc42bpb
518 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	168
Count of miRNA genes:	105
Interacting mature miRNAs:	137
Transcripts:	ENSRNOT00000039059
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12801411	Schws8	Schwannoma susceptibility QTL 8			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	94968928	139968928	Rat
4145118	Mcs26	Mammary carcinoma susceptibility QTL 26		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	106752656	132339866	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	72202632	130919985	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	72227641	130729205	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	122549046	137801795	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	94968928	137848904	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	105156861	140994061	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	100364669	140994061	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	85311061	133478515	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	88047916	133047916	Rat
731173	Uae22	Urinary albumin excretion QTL 22	10.1		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	122549046	140994061	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	72202632	130729475	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	112636280	140994061	Rat
2312560	Pur20	Proteinuria QTL 20	2.1	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	125628133	137801795	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	100671796	132340886	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	72227641	130729205	Rat
2290393	Uae37	Urinary albumin excretion QTL 37		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
8552796	Vie3	Viral induced encephalitis QTL 3	2.6		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	6	96833997	140994061	Rat
1300076	Glom8	Glomerulus QTL 8	7	9e-09	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	6	86894788	131894788	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	122549046	140286318	Rat

Markers in Region

RH127478

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,333,997 - 130,334,182 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	135,747,029 - 135,747,213	NCBI	Rnor6.0
Rnor_5.0	6	144,667,216 - 144,667,400	UniSTS	Rnor5.0
RGSC_v3.4	6	136,054,171 - 136,054,355	UniSTS	RGSC3.4
Celera	6	127,891,276 - 127,891,460	UniSTS
RH 3.4 Map	6	781.0	UniSTS
Cytogenetic Map	6	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	163	91	90	59	88	59	6	352	188	11	142	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005505433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF021936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY277590	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB748377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039059 ⟹ ENSRNOP00000036487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	136,154,905 - 136,237,570 (-)	Ensembl
mRatBN7.2 Ensembl	6	130,333,712 - 130,416,377 (-)	Ensembl
Rnor_6.0 Ensembl	6	135,746,754 - 135,830,086 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000080623 ⟹ ENSRNOP00000075663

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	136,156,026 - 136,237,570 (-)	Ensembl
mRatBN7.2 Ensembl	6	130,334,833 - 130,416,377 (-)	Ensembl
Rnor_6.0 Ensembl	6	135,747,740 - 135,829,953 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157383 ⟹ ENSRNOP00000108806

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	136,154,905 - 136,237,570 (-)	Ensembl

RefSeq Acc Id:

NM_053620 ⟹ NP_446072

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,154,905 - 136,237,570 (-)	NCBI
mRatBN7.2	6	130,333,712 - 130,416,377 (-)	NCBI
Rnor_6.0	6	135,746,743 - 135,829,994 (-)	NCBI
Rnor_5.0	6	144,585,365 - 144,667,686 (+)	NCBI
RGSC_v3.4	6	136,053,885 - 136,136,234 (-)	RGD
Celera	6	127,890,990 - 127,973,161 (-)	RGD

Sequence:

show sequence

CGGCCGCTGGGCCGGGGAGTGCTGGCTCTGACGCCGGGGCGCACGGGCAGCGAGAGGCCGGCGC
GTGGGGAGCGGGCCGCGCGGCACCATGTCGGCCAAGGTGCGGCTCAAGAAGCTGGAGCAGCTGC
TCCTGGACGGGCCGTGGCGCAATGAGAGCTCCCTGAGCGTGGAGACGCTGCTGGACGTGCTGGT
GTGCCTTTACACCGAGTGCAGCCACTCGGCGCTGCGCCGCGACAAGTATGTGGCGGAGTTCCTC
GAGTGGGCTAAGCCATTCACCCAGCTCGTGAAGGACATGCAGCTTCATCGGGAGGACTTTGAGA
TCATCAAAGTGATTGGAAGAGGAGCTTTTGGTGAGGTTGCTGTTGTCAAAATGAAGAACACTGA
ACGAATTTATGCAATGAAAATTCTCAACAAATGGGAGATGCTAAAGAGAGCAGAGACAGCTTGC
TTTCGAGAAGAGAGGGATGTGCTGGTGAACGGTGACTGCCAGTGGATCACTGCGCTACACTACG
CCTTTCAAGATGAGAACTACCTGTACTTGGTTATGGATTACTATGTGGGTGGTGACTTGCTGAC
CCTGCTGAGTAAGTTTGAAGACAAACTTCCAGAAGACATGGCGAGGTTCTACATTGGCGAGATG
GTGTTGGCCATCGACTCGATCCACCAGCTCCACTATGTGCACAGAGACATTAAACCCGACAACG
TCCTTCTGGATGTCAACGGTCACATCCGCCTGGCTGACTTTGGCTCGTGCTTGAAGATGAACGA
TGACGGCACTGTTCAGTCTTCCGTGGCTGTGGGCACACCTGACTACATCTCACCAGAGATCCTG
CAGGCCATGGAGGATGGCATGGGCAAATACGGGCCCGAGTGTGACTGGTGGTCCCTGGGCGTCT
GCATGTATGAGATGCTGTATGGAGAAACGCCATTTTATGCAGAGTCTCTGGTGGAGACATATGG
AAAGATCATGAACCACGAGGAGCGGTTTCAGTTCCCATCCCACGTCACTGACGTCTCTGAAGAA
GCGAAAGACCTCATCCAGAGACTAATATGCAGCAGAGAGCGCCGGCTCGGGCAGAACGGGATAG
AGGACTTTAAGAAACATGCATTCTTTGAAGGTCTAAATTGGGAAAATATACGGAACCTGGAAGC
ACCCTACATTCCCGATGTGAGCAGCCCTTCTGACACGTCCAACTTCGATGTGGACGATGACGTG
CTGAGAAACATCGAAATCTTACCTCCCGGCTCTCACACGGGCTTCTCGGGACTGCACCTACCCT
TCATTGGCTTTACATTTACGACAGAAAGCTGCTTTTCTGACCGAGGCTCTCTGAAGAGCATGAT
ACAGTCTAACACGCTAACCAAAGATGAGGATGTGCAGCGGGATTTGGAGAACAGCTTGCAGATC
GAAGCTTACGAGCGAAGGATACGAAGGCTGGAACAGGAGAAGCTAGAGCTGAGCCGGAAGCTGC
AAGAGTCCACCCAGACTGTGCAGTCCCTTCACGGTTCCACACGGGCCCTGGGCAACTCAAACCG
TGACAAGGAAATCAAGAGGCTGAATGAAGAGCTTGAACGCATGAAGAGTAAAATGGCAGATTCA
AACAGGCTCGAACGACAGCTCGAGGATACCGTGACCCTTCGCCAGGAGCATGAAGACTCCACAC
AACGGCTGAAGGGCCTGGAGAAGCAGTACCGCCTGGCACGGCAGGAGAAGGAAGAATTGCACAA
GCAATTGGTTGAAGCTTCAGAGCGATTGAAATCCCAGACCAAAGAACTCAAAGATGCTCATCAG
CAGCGAAAACGGGCCCTGCAGGAGTTTTCAGAGCTCAATGAGCGCATGGCAGAGCTGAGGTCAC
AGAAGCAGAAGGTGTCCCGGCAGCTCCGTGACAAGGAGGAGGAGATGGAGGTGGCCATGCAGAA
GATTGACTCCATGAGGCAGGATATCCGCAAGTCTGAGAAGTCTAGGAAAGAGCTGGAAGCTCGG
CTTGAGGACGCAGTCGCTGAGGCCTCCAAGGAGAGGAAGCTTCGAGAGCACAGTGAGAGCTTCT
CTAAGCAGATGGAGCGCGAGCTCGAGACCCTCAAGGTGAAGCAAGGAGGCCGGGGGCCGGGTGC
CACGTTAGAACATCAGCAGGAGATCTCCAAAATCAGGTCAGAGCTTGAGAAGAAAGTCTTGTTC
TATGAGGAGGAGTTGGTCCGCCGAGAGGCCTCCCATGTGCTAGAAGTAAAGAATGTGAAGAAGG
AGGTGCACGAATCTGAAAGCCACCAGTTGGCCCTGCAGAAAGAGGTCCTGATGCTGAAAGATAA
GTTAGAAAAGTCAAAACGAGAACGGCACAGTGAGATGGAGGAGGCCATAGGTGCCATGAAAGAC
AAGTACGAACGGGAGAGGGCCATGCTGTTCGACGAGAACAAGAAGTTAACAGCAGAAAACGAAA
AGCTCTGTTCCTTTGTGGATAAACTAACAGCCCAAAACAGACAGCTGGAGGACGAGCTGCAGGA
CCTGGCCTCCAAGAAGGAGTCGGTCGCTCACTGGGAGGCGCAGATTGCAGAGATTATTCAGTGG
GTCAGCGATGAGAAAGATGCCAGAGGCTACCTTCAAGCACTTGCTTCTAAGATGACCGAAGAGC
TTGAGACTTTGAGAAGCTCTAGTTTGGGATCCAGGACACTGGACCCACTCTGGAAGGTCCGTCG
GAGCCAGAAGCTGGACATGTCTGCGCGGCTGGAGTTGCAGTCCGCTCTCGAGGCAGAGATCCGT
GCCAAGCAGCTGGTTCACGAGGAGCTGAGGAAGGTCAAAGACACCAGCCTAGCCTTCGAAAGCA
AACTGAAGGAGTCAGAAGCCAAAAACAGGGAATTATTAGAAGAAATGCAAAGTCTGAAGAAAAG
GATGGAAGAAAAATTTAGAGCAGATACAGGGCTCAAACTTCCAGATTTCCAGGATCCTATCTTT
GAGTACTTCAACACTGCTCCTCTTGCACATGACCTGACTTTTAGAACTAGCTCAGCTAGTGATC
AGGAAACACAGGCTTCAAAGTTGGACTTGTCCCCATCAGTGTCTGTGGCCACAAGCACAGAACA
GCAGGAGGATGCGGCTCGTTCACAGCAGAGGCCGTCTACTGTGCCGCTGCCCAACACACAGGCC
CTCGCCATGGCTGGACCAAAGCCCAAGGCACACCAGTTCAGCATCAAGTCCTTCCCCAGCCCCA
CCCAGTGTAGCCACTGTACGTCCTTGATGGTTGGGCTGATCCGACAGGGCTATGCCTGTGAGGT
CTGCGCGTTTTCCTGCCATGTGTCCTGCAAAGACAGCGCTCCCCAGGTGTGCCCCATACCTCCT
GAGCAGTCCAAGCGGCCTCTCGGCGTAGACGTGCAGAGGGGCATAGGCACAGCCTACAAGGGCT
ACGTCAAGGTCCCGAAGCCCACAGGCGTGAAGAAAGGGTGGCAGCGGGCTTACGCAGTGGTCTG
TGACTGCAAGCTCTTCCTGTACGACCTGCCAGAAGGGAAGTCCACCCAGCCTGGGGTCATCGCC
AGTCAAGTCTTAGACCTCAGAGATGACGAGTTTGCTGTGAGCTCAGTCCTGGCCTCAGATGTCA
TCCATGCTACACGCCGAGACATCCCGTGTATATTCAGGGTGACGGCCTCTCTCTTAGGTTCACC
TTCTAAGACCAGCTCACTGCTCATCCTGACAGAGAACGAGAATGAAAAGAGGAAGTGGGTTGGG
ATCCTGGAAGGGCTGCAGGCTATCCTCCACAAGAACCGGCTGAGGAGCCAGGTGGTGCACGTGG
CACAGGAAGCGTACGACAGCTCACTGCCGCTCATCAAGACCGTCCTGGCTGCCGCTATTGTGGA
TGGAGACAGAATTGCGGTCGGCCTGGAAGAAGGGCTCTACGTCATTGAGCTCACCCGAGATGTG
ATCGTCCGCGCTGCTGACTGCAAGAAGGTATACCAGATCGAGCTGGCGCCCAAGGAGAAGCTCA
TCCTCCTCCTCTGTGGCCGGAACCACCACGTGCACCTCTACCCCTGGACCTCCTTCGATGGAGC
AGAAGCTAGCAACTTTGACATCAAGCTCCCAGAAACGAAGGGCTGCCAGCTCATAGCAACAGGG
ACGCTGAGGAAGAGCTCGTCCACCTGCCTGTTTGTCGCCGTGAAGCGGCTGGTCCTTTGCTACG
AGATCCAGAGAACTAAGCCTTTCCACCGGAAGTTCAATGAGATCGTGGCCCCGGGACATGTGCA
GTGGATGGCCATGTTCAAGGACAGGCTCTGTGTTGGCTACCCCTCCGGGTTCTCTCTGTTGAGC
ATCCAGGGGGACGGGCAGCCTCTAGACCTGGTAAATCCCGCTGACCCCTCGCTCGCGTTCCTCT
CACAGCAGTCTTTCGATGCCCTCTGTGCTGTAGAGCTCAAAAGTGAGGAGTACCTGCTCTGCTT
CAGCCACATGGGACTGTACGTGGACCCTCAAGGTCGGAGGTCACGCACGCAGGAGCTCATGTGG
CCTGCGGCTCCTGTCGCCTGTAGTTGCAGCTCCTCCCACGTCACGGTGTACAGCGAATACGGGG
TGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAGGATAAGACC
TCTGAACTCTGATGGTAGCCTCAACCTGCTGGGCTGTGAGCCCCCACGCCTCATCTACTTCAAA
AACAAGTTCTCAGGCACCGTCCTCAATGTGCCCGATACCTCGGACAACAGCAAGAAGCAGATGC
TGCGGACGCGGAGCAAACGGCGCTTCGTCTTCAAGGTTCCAGAGGAAGAGAGGCTGCAGCAGCG
GCGAGAGATGCTCAGAGACCCGGAACTGAGATCCAAAATGATATCCAATCCGACCAACTTCAAC
CACGTGGCTCACATGGGCCCTGGCGATGGGATGCAGGTGCTCATGGACCTGCCTCTGAGTGCTG
CGCCCACAGCCCAGGAGGAAAAGCAGGGTCCTGCCCCAACAGGCCTCCCTCGGCAGCTCCCATC
CAGGAACAAGCCCTATGTCTCATGGCCGTCCTCAGGTGGGTCTGAGCCTGGAGTGCCTGTGCCT
CTGAGGAGCATGTCTGACCCCGACCAGGATTTTGACAAAGAGCCTGACTCTGACTCCACGAAGC
ACTCGACTCCGTCCAACAGCTCCAACCCTAGCGGCCCCCCGAGCCCCAACTCACCGCACCGGAG
CCAGCTCCCTCTGGAAGGCCTGGACCAGCCAGCCTGCGACGCCTGAGGCCGCCAGCATAGCACC
ATAGGGCCAGGGAGCCCAGATGGCCCCAACATCAGTGCCAAGACTGAGCTGACCCTCCAGTGTT
GTCCAAGGAAATGTAGAATCAGTTTGTAGATAGATAAAGTAATCTTTATTATAATGATCAGTTT
TGTGCCACGTTGTTGGTGGCAACCGACCAGATGTGTTCGTCTGCACAGCCGCAAGGCAACACTG
TTCCGTTTGCACATGAAGGACCACCACTCACCCCTCCCCCCAGGACCACCCAGGCCCACATCCA
TCGGCTTCCTCAGCAGATGCTGGGGTATGACCTCAAGACCTCCCTCTCTCCTGAAGCTGTCTCA
AGGCCCTACAAAGACTAAAGTGCGCCAACCCAGTGTCACAGAAGGCAGAGGATAGTTTGTGGCC
TTTTCATTCACTTAACCCTGACACAGGAAGCCACAGCAGTCCTGCTGACCGGCCGCCTGTGTCC
CTCTGTCCGTCCATTCTGGGCCACAGCCACGAGATGCCCCTCCTCCTGTGAAGGCAGCTGTGCA
CTGGCTCCCACTGTGTCTGCAGCCTGCCACTGGCCGGCACACACAGGAGTTCAGAGGTGGCCAG
AGCCTGGGAGCCATGCCCCAGGCCCTACGACGCCCCCTCCCCCATCGCCCTCCCCCACCCTGCA
TGGAGCCTCTGTGCTTAGTGGCCGAGTCAGTCACACGACTGCCCCACACTCCTGCACATCGGCA
GCACCACGGCCCGGGAATGCCACGTGTGTTGAACCTCATCCCTCTGTGTCCTGGGCTGAGATCA
GGTCTGTGGCCCTACCCATGAAGGCTTGCGACTAACTGTGGCAGCAGACATGTCTTGTCCTCGT
CCTGGACAGGCCTCCCTTCCCCGCTGGCGCACTCGGGGACGAGATTCGGGGTGAGCGCTTGGCC
AAGTTGGCACTGAGGGTTGTGGCACTGCTGGCCAAGCCTGTGTGTCACACCCAGCACCTGCTGC
CTGCCCCGTCCACCCTCCCCGGCTTTGTGCCGGGGCAGGCACCTGCTGGGGGTTCTGGTTTTTA
CTTTTTTAATGTAAGTCTGAGTCTTTGTAATTATTGAATTGTGAGAACATTTTTGAACAATTTA
CCTGTCAATAAAGCAGAAGACGGCAGTTTTAAAGTTCAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006240562 ⟹ XP_006240624

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,154,906 - 136,241,259 (-)	NCBI
mRatBN7.2	6	130,333,712 - 130,416,631 (-)	NCBI
Rnor_6.0	6	135,746,744 - 135,830,144 (-)	NCBI
Rnor_5.0	6	144,585,365 - 144,667,686 (+)	NCBI

Sequence:

show sequence

CGTGCGGGCGGCGCCTAGGGGAGGAGACCGGCCCATGGACCCGCGGGGCCCGGTGCCCCAGACT
CGGTGCCGCCGGGACGGAGCCCAAGATGTCGGCCTAGGCCGGGCTGCGACGACAAGGACTGCGC
GGCTACTGGACGCCGGGGTGCACGGCCGCTGGGCCGGGGAGTGCTGGCTCTGACGCCGGGGCGC
ACGGGCAGCGAGAGGCCGGCGCGTGGGGAGCGGGCCGCGCGGCACCATGTCGGCCAAGGTGCGG
CTCAAGAAGCTGGAGCAGCTGCTCCTGGACGGGCCGTGGCGCAATGAGAGCTCCCTGAGCGTGG
AGACGCTGCTGGACGTGCTGGTGTGCCTTTACACCGAGTGCAGCCACTCGGCGCTGCGCCGCGA
CAAGTATGTGGCGGAGTTCCTCGAGTGGGCTAAGCCATTCACCCAGCTCGTGAAGGACATGCAG
CTTCATCGGGAGGACTTTGAGATCATCAAAGTGATTGGAAGAGGAGCTTTTGGTGAGGTTGCTG
TTGTCAAAATGAAGAACACTGAACGAATTTATGCAATGAAAATTCTCAACAAATGGGAGATGCT
AAAGAGAGCAGAGACAGCTTGCTTTCGAGAAGAGAGGGATGTGCTGGTGAACGGTGACTGCCAG
TGGATCACTGCGCTACACTACGCCTTTCAAGATGAGAACTACCTGTACTTGGTTATGGATTACT
ATGTGGGTGGTGACTTGCTGACCCTGCTGAGTAAGTTTGAAGACAAACTTCCAGAAGACATGGC
GAGGTTCTACATTGGCGAGATGGTGTTGGCCATCGACTCGATCCACCAGCTCCACTATGTGCAC
AGAGACATTAAACCCGACAACGTCCTTCTGGATGTCAACGGTCACATCCGCCTGGCTGACTTTG
GCTCGTGCTTGAAGATGAACGATGACGGCACTGTTCAGTCTTCCGTGGCTGTGGGCACACCTGA
CTACATCTCACCAGAGATCCTGCAGGCCATGGAGGATGGCATGGGCAAATACGGGCCCGAGTGT
GACTGGTGGTCCCTGGGCGTCTGCATGTATGAGATGCTGTATGGAGAAACGCCATTTTATGCAG
AGTCTCTGGTGGAGACATATGGAAAGATCATGAACCACGAGGAGCGGTTTCAGTTCCCATCCCA
CGTCACTGACGTCTCTGAAGAAGCGAAAGACCTCATCCAGAGACTAATATGCAGCAGAGAGCGC
CGGCTCGGGCAGAACGGGATAGAGGACTTTAAGAAACATGCATTCTTTGAAGGTCTAAATTGGG
AAAATATACGGAACCTGGAAGCACCCTACATTCCCGATGTGAGCAGCCCTTCTGACACGTCCAA
CTTCGATGTGGACGATGACGTGCTGAGAAACATCGAAATCTTACCTCCCGGCTCTCACACGGGC
TTCTCGGGACTGCACCTACCCTTCATTGGCTTTACATTTACGACAGAAAGCTGCTTTTCTGACC
GAGGCTCTCTGAAGAGCATGATACAGTCTAACACGCTAACCAAAGATGAGGATGTGCAGCGGGA
TTTGGAGAACAGCTTGCAGATCGAAGCTTACGAGCGAAGGATACGAAGGCTGGAACAGGAGAAG
CTAGAGCTGAGCCGGAAGCTGCAAGAGTCCACCCAGACTGTGCAGTCCCTTCACGGTTCCACAC
GGGCCCTGGGCAACTCAAACCGTGACAAGGAAATCAAGAGGCTGAATGAAGAGCTTGAACGCAT
GAAGAGTAAAATGGCAGATTCAAACAGGCTCGAACGACAGCTCGAGGATACCGTGACCCTTCGC
CAGGAGCATGAAGACTCCACACAACGGCTGAAGGGCCTGGAGAAGCAGTACCGCCTGGCACGGC
AGGAGAAGGAAGAATTGCACAAGCAATTGGTTGAAGCTTCAGAGCGATTGAAATCCCAGACCAA
AGAACTCAAAGATGCTCATCAGCAGCGAAAACGGGCCCTGCAGGAGTTTTCAGAGCTCAATGAG
CGCATGGCAGAGCTGAGGTCACAGAAGCAGAAGGTGTCCCGGCAGCTCCGTGACAAGGAGGAGG
AGATGGAGGTGGCCATGCAGAAGATTGACTCCATGAGGCAGGATATCCGCAAGTCTGAGAAGTC
TAGGAAAGAGCTGGAAGCTCGGCTTGAGGACGCAGTCGCTGAGGCCTCCAAGGAGAGGAAGCTT
CGAGAGCACAGTGAGAGCTTCTCTAAGCAGATGGAGCGCGAGCTCGAGACCCTCAAGGTGAAGC
AAGGAGGCCGGGGGCCGGGTGCCACGTTAGAACATCAGCAGGAGATCTCCAAAATCAGGTCAGA
GCTTGAGAAGAAAGTCTTGTTCTATGAGGAGGAGTTGGTCCGCCGAGAGGCCTCCCATGTGCTA
GAAGTAAAGAATGTGAAGAAGGAGGTGCACGAATCTGAAAGCCACCAGTTGGCCCTGCAGAAAG
AGGTCCTGATGCTGAAAGATAAGTTAGAAAAGTCAAAACGAGAACGGCACAGTGAGATGGAGGA
GGCCATAGGTGCCATGAAAGACAAGTACGAACGGGAGAGGGCCATGCTGTTCGACGAGAACAAG
AAGTTAACAGCAGAAAACGAAAAGCTCTGTTCCTTTGTGGATAAACTAACAGCCCAAAACAGAC
AGCTGGAGGACGAGCTGCAGGACCTGGCCTCCAAGAAGGAGTCGGTCGCTCACTGGGAGGCGCA
GATTGCAGAGATTATTCAGTGGGTCAGCGATGAGAAAGATGCCAGAGGCTACCTTCAAGCACTT
GCTTCTAAGATGACCGAAGAGCTTGAGACTTTGAGAAGCTCTAGTTTGGGATCCAGGACACTGG
ACCCACTCTGGAAGGTCCGTCGGAGCCAGAAGCTGGACATGTCTGCGCGGCTGGAGTTGCAGTC
CGCTCTCGAGGCAGAGATCCGTGCCAAGCAGCTGGTTCACGAGGAGCTGAGGAAGGTCAAAGAC
ACCAGCCTAGCCTTCGAAAGCAAACTGAAGGAGTCAGAAGCCAAAAACAGGGAATTATTAGAAG
AAATGCAAAGTCTGAAGAAAAGGATGGAAGAAAAATTTAGAGCAGATACAGGGCTCAAACTTCC
AGATTTCCAGGATCCTATCTTTGAGTACTTCAACACTGCTCCTCTTGCACATGACCTGACTTTT
AGAGACTCGCTCTCCTCCTCATCTGCATCTTCTCTGCTAGCCTTGTGGGAGGACACTAGCTCAG
CTAGTGATCAGGAAACACAGGCTTCAAAGTTGGACTTGTCCCCATCAGTGTCTGTGGCCACAAG
CACAGAACAGCAGGAGGATGCGGCTCGTTCACAGCAGAGGCCGTCTACTGTGCCGCTGCCCAAC
ACACAGGCCCTCGCCATGGCTGGACCAAAGCCCAAGGCACACCAGTTCAGCATCAAGTCCTTCC
CCAGCCCCACCCAGTGTAGCCACTGTACGTCCTTGATGGTTGGGCTGATCCGACAGGGCTATGC
CTGTGAGGTCTGCGCGTTTTCCTGCCATGTGTCCTGCAAAGACAGCGCTCCCCAGGTGTGCCCC
ATACCTCCTGAGCAGTCCAAGCGGCCTCTCGGCGTAGACGTGCAGAGGGGCATAGGCACAGCCT
ACAAGGGCTACGTCAAGGTCCCGAAGCCCACAGGCGTGAAGAAAGGGTGGCAGCGGGCTTACGC
AGTGGTCTGTGACTGCAAGCTCTTCCTGTACGACCTGCCAGAAGGGAAGTCCACCCAGCCTGGG
GTCATCGCCAGTCAAGTCTTAGACCTCAGAGATGACGAGTTTGCTGTGAGCTCAGTCCTGGCCT
CAGATGTCATCCATGCTACACGCCGAGACATCCCGTGTATATTCAGGGTGACGGCCTCTCTCTT
AGGTTCACCTTCTAAGACCAGCTCACTGCTCATCCTGACAGAGAACGAGAATGAAAAGAGGAAG
TGGGTTGGGATCCTGGAAGGGCTGCAGGCTATCCTCCACAAGAACCGGCTGAGGAGCCAGGTGG
TGCACGTGGCACAGGAAGCGTACGACAGCTCACTGCCGCTCATCAAGACCGTCCTGGCTGCCGC
TATTGTGGATGGAGACAGAATTGCGGTCGGCCTGGAAGAAGGGCTCTACGTCATTGAGCTCACC
CGAGATGTGATCGTCCGCGCTGCTGACTGCAAGAAGGTATACCAGATCGAGCTGGCGCCCAAGG
AGAAGCTCATCCTCCTCCTCTGTGGCCGGAACCACCACGTGCACCTCTACCCCTGGACCTCCTT
CGATGGAGCAGAAGCTAGCAACTTTGACATCAAGCTCCCAGAAACGAAGGGCTGCCAGCTCATA
GCAACAGGGACGCTGAGGAAGAGCTCGTCCACCTGCCTGTTTGTCGCCGTGAAGCGGCTGGTCC
TTTGCTACGAGATCCAGAGAACTAAGCCTTTCCACCGGAAGTTCAATGAGATCGTGGCCCCGGG
ACATGTGCAGTGGATGGCCATGTTCAAGGACAGGCTCTGTGTTGGCTACCCCTCCGGGTTCTCT
CTGTTGAGCATCCAGGGGGACGGGCAGCCTCTAGACCTGGTAAATCCCGCTGACCCCTCGCTCG
CGTTCCTCTCACAGCAGTCTTTCGATGCCCTCTGTGCTGTAGAGCTCAAAAGTGAGGAGTACCT
GCTCTGCTTCAGCCACATGGGACTGTACGTGGACCCTCAAGGTCGGAGGTCACGCACGCAGGAG
CTCATGTGGCCTGCGGCTCCTGTCGCCTGTAGTTGCAGCTCCTCCCACGTCACGGTGTACAGCG
AATACGGGGTGGATGTCTTCGACGTGCGCACCATGGAGTGGGTTCAGACCATCGGCCTGCGGAG
GATAAGACCTCTGAACTCTGATGGTAGCCTCAACCTGCTGGGCTGTGAGCCCCCACGCCTCATC
TACTTCAAAAACAAGTTCTCAGGCACCGTCCTCAATGTGCCCGATACCTCGGACAACAGCAAGA
AGCAGATGCTGCGGACGCGGAGCAAACGGCGCTTCGTCTTCAAGGTTCCAGAGGAAGAGAGGCT
GCAGCAGCGGCGAGAGATGCTCAGAGACCCGGAACTGAGATCCAAAATGATATCCAATCCGACC
AACTTCAACCACGTGGCTCACATGGGCCCTGGCGATGGGATGCAGGTGCTCATGGACCTGCCTC
TGAGTGCTGCGCCCACAGCCCAGGAGGAAAAGCAGGGTCCTGCCCCAACAGGCCTCCCTCGGCA
GCTCCCATCCAGGAACAAGCCCTATGTCTCATGGCCGTCCTCAGGTGGGTCTGAGCCTGGAGTG
CCTGTGCCTCTGAGGAGCATGTCTGACCCCGACCAGGATTTTGACAAAGAGCCTGACTCTGACT
CCACGAAGCACTCGACTCCGTCCAACAGCTCCAACCCTAGCGGCCCCCCGAGCCCCAACTCACC
GCACCGGAGCCAGCTCCCTCTGGAAGGCCTGGACCAGCCAGCCTGCGACGCCTGAGGCCGCCAG
CATAGCACCATAGGGCCAGGGAGCCCAGATGGCCCCAACATCAGTGCCAAGACTGAGCTGACCC
TCCAGTGTTGTCCAAGGAAATGTAGAATCAGTTTGTAGATAGATAAAGTAATCTTTATTATAAT
GATCAGTTTTGTGCCACGTTGTTGGTGGCAACCGACCAGATGTGTTCGTCTGCACAGCCGCAAG
GCAACACTGTTCCGTTTGCACATGAAGGACCACCACTCACCCCTCCCCCCAGGACCACCCAGGC
CCACATCCATCGGCTTCCTCAGCAGATGCTGGGGTATGACCTCAAGACCTCCCTCTCTCCTGAA
GCTGTCTCAAGGCCCTACAAAGACTAAAGTGCGCCAACCCAGTGTCACAGAAGGCAGAGGATAG
TTTGTGGCCTTTTCATTCACTTAACCCTGACACAGGAAGCCACAGCAGTCCTGCTGACCGGCCG
CCTGTGTCCCTCTGTCCGTCCATTCTGGGCCACAGCCACGAGATGCCCCTCCTCCTGTGAAGGC
AGCTGTGCACTGGCTCCCACTGTGTCTGCAGCCTGCCACTGGCCGGCACACACAGGAGTTCAGA
GGTGGCCAGAGCCTGGGAGCCATGCCCCAGGCCCTACGACGCCCCCTCCCCCATCGCCCTCCCC
CACCCTGCATGGAGCCTCTGTGCTTAGTGGCCGAGTCAGTCACACGACTGCCCCACACTCCTGC
ACATCGGCAGCACCACGGCCCGGGAATGCCACGTGTGTTGAACCTCATCCCTCTGTGTCCTGGG
CTGAGATCAGGTCTGTGGCCCTACCCATGAAGGCTTGCGACTAACTGTGGCAGCAGACATGTCT
TGTCCTCGTCCTGGACAGGCCTCCCTTCCCCGCTGGCGCACTCGGGGACGAGATTCGGGGTGAG
CGCTTGGCCAAGTTGGCACTGAGGGTTGTGGCACTGCTGGCCAAGCCTGTGTGTCACACCCAGC
ACCTGCTGCCTGCCCCGTCCACCCTCCCCGGCTTTGTGCCGGGGCAGGCACCTGCTGGGGGTTC
TGGTTTTTACTTTTTTAATGTAAGTCTGAGTCTTTGTAATTATTGAATTGTGAGAACATTTTTG
AACAATTTACCTGTCAATAAAGCAGAAGACGGCAGTTTTAAAGTT

hide sequence

RefSeq Acc Id:

XR_005505433

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	136,156,040 - 136,241,259 (-)	NCBI
mRatBN7.2	6	130,334,848 - 130,416,289 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_446072	(Get FASTA)	NCBI Sequence Viewer
	XP_006240624	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC02942	(Get FASTA)	NCBI Sequence Viewer
	AAP34403	(Get FASTA)	NCBI Sequence Viewer
	EDL97476	(Get FASTA)	NCBI Sequence Viewer
	EDL97477	(Get FASTA)	NCBI Sequence Viewer
	EDL97478	(Get FASTA)	NCBI Sequence Viewer
	EDL97479	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000036487
	ENSRNOP00000036487.2
	ENSRNOP00000108806
GenBank Protein	Q7TT49	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_446072 ⟸ NM_053620

- UniProtKB:

O54875 (UniProtKB/Swiss-Prot), Q7TT49 (UniProtKB/Swiss-Prot), A6KBQ3 (UniProtKB/TrEMBL), A6KBQ2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSAKVRLKKLEQLLLDGPWRNESSLSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQ
LVKDMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL
VNGDCQWITALHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH
QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG
KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL
ICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNIEILP
PGSHTGFSGLHLPFIGFTFTTESCFSDRGSLKSMIQSNTLTKDEDVQRDLENSLQIEAYERRIR
RLEQEKLELSRKLQESTQTVQSLHGSTRALGNSNRDKEIKRLNEELERMKSKMADSNRLERQLE
DTVTLRQEHEDSTQRLKGLEKQYRLARQEKEELHKQLVEASERLKSQTKELKDAHQQRKRALQE
FSELNERMAELRSQKQKVSRQLRDKEEEMEVAMQKIDSMRQDIRKSEKSRKELEARLEDAVAEA
SKERKLREHSESFSKQMERELETLKVKQGGRGPGATLEHQQEISKIRSELEKKVLFYEEELVRR
EASHVLEVKNVKKEVHESESHQLALQKEVLMLKDKLEKSKRERHSEMEEAIGAMKDKYERERAM
LFDENKKLTAENEKLCSFVDKLTAQNRQLEDELQDLASKKESVAHWEAQIAEIIQWVSDEKDAR
GYLQALASKMTEELETLRSSSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVHEE
LRKVKDTSLAFESKLKESEAKNRELLEEMQSLKKRMEEKFRADTGLKLPDFQDPIFEYFNTAPL
AHDLTFRTSSASDQETQASKLDLSPSVSVATSTEQQEDAARSQQRPSTVPLPNTQALAMAGPKP
KAHQFSIKSFPSPTQCSHCTSLMVGLIRQGYACEVCAFSCHVSCKDSAPQVCPIPPEQSKRPLG
VDVQRGIGTAYKGYVKVPKPTGVKKGWQRAYAVVCDCKLFLYDLPEGKSTQPGVIASQVLDLRD
DEFAVSSVLASDVIHATRRDIPCIFRVTASLLGSPSKTSSLLILTENENEKRKWVGILEGLQAI
LHKNRLRSQVVHVAQEAYDSSLPLIKTVLAAAIVDGDRIAVGLEEGLYVIELTRDVIVRAADCK
KVYQIELAPKEKLILLLCGRNHHVHLYPWTSFDGAEASNFDIKLPETKGCQLIATGTLRKSSST
CLFVAVKRLVLCYEIQRTKPFHRKFNEIVAPGHVQWMAMFKDRLCVGYPSGFSLLSIQGDGQPL
DLVNPADPSLAFLSQQSFDALCAVELKSEEYLLCFSHMGLYVDPQGRRSRTQELMWPAAPVACS
CSSSHVTVYSEYGVDVFDVRTMEWVQTIGLRRIRPLNSDGSLNLLGCEPPRLIYFKNKFSGTVL
NVPDTSDNSKKQMLRTRSKRRFVFKVPEEERLQQRREMLRDPELRSKMISNPTNFNHVAHMGPG
DGMQVLMDLPLSAAPTAQEEKQGPAPTGLPRQLPSRNKPYVSWPSSGGSEPGVPVPLRSMSDPD
QDFDKEPDSDSTKHSTPSNSSNPSGPPSPNSPHRSQLPLEGLDQPACDA

hide sequence

RefSeq Acc Id:	XP_006240624 ⟸ XM_006240562
- Peptide Label:	isoform X1
- UniProtKB:	A6KBQ2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSAKVRLKKLEQLLLDGPWRNESSLSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQ LVKDMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL VNGDCQWITALHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRL ICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNIEILP PGSHTGFSGLHLPFIGFTFTTESCFSDRGSLKSMIQSNTLTKDEDVQRDLENSLQIEAYERRIR RLEQEKLELSRKLQESTQTVQSLHGSTRALGNSNRDKEIKRLNEELERMKSKMADSNRLERQLE DTVTLRQEHEDSTQRLKGLEKQYRLARQEKEELHKQLVEASERLKSQTKELKDAHQQRKRALQE FSELNERMAELRSQKQKVSRQLRDKEEEMEVAMQKIDSMRQDIRKSEKSRKELEARLEDAVAEA SKERKLREHSESFSKQMERELETLKVKQGGRGPGATLEHQQEISKIRSELEKKVLFYEEELVRR EASHVLEVKNVKKEVHESESHQLALQKEVLMLKDKLEKSKRERHSEMEEAIGAMKDKYERERAM LFDENKKLTAENEKLCSFVDKLTAQNRQLEDELQDLASKKESVAHWEAQIAEIIQWVSDEKDAR GYLQALASKMTEELETLRSSSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVHEE LRKVKDTSLAFESKLKESEAKNRELLEEMQSLKKRMEEKFRADTGLKLPDFQDPIFEYFNTAPL AHDLTFRDSLSSSSASSLLALWEDTSSASDQETQASKLDLSPSVSVATSTEQQEDAARSQQRPS TVPLPNTQALAMAGPKPKAHQFSIKSFPSPTQCSHCTSLMVGLIRQGYACEVCAFSCHVSCKDS APQVCPIPPEQSKRPLGVDVQRGIGTAYKGYVKVPKPTGVKKGWQRAYAVVCDCKLFLYDLPEG KSTQPGVIASQVLDLRDDEFAVSSVLASDVIHATRRDIPCIFRVTASLLGSPSKTSSLLILTEN ENEKRKWVGILEGLQAILHKNRLRSQVVHVAQEAYDSSLPLIKTVLAAAIVDGDRIAVGLEEGL YVIELTRDVIVRAADCKKVYQIELAPKEKLILLLCGRNHHVHLYPWTSFDGAEASNFDIKLPET KGCQLIATGTLRKSSSTCLFVAVKRLVLCYEIQRTKPFHRKFNEIVAPGHVQWMAMFKDRLCVG YPSGFSLLSIQGDGQPLDLVNPADPSLAFLSQQSFDALCAVELKSEEYLLCFSHMGLYVDPQGR RSRTQELMWPAAPVACSCSSSHVTVYSEYGVDVFDVRTMEWVQTIGLRRIRPLNSDGSLNLLGC EPPRLIYFKNKFSGTVLNVPDTSDNSKKQMLRTRSKRRFVFKVPEEERLQQRREMLRDPELRSK MISNPTNFNHVAHMGPGDGMQVLMDLPLSAAPTAQEEKQGPAPTGLPRQLPSRNKPYVSWPSSG GSEPGVPVPLRSMSDPDQDFDKEPDSDSTKHSTPSNSSNPSGPPSPNSPHRSQLPLEGLDQPAC DA hide sequence

Ensembl Acc Id:

ENSRNOP00000075663 ⟸ ENSRNOT00000080623

Ensembl Acc Id:

ENSRNOP00000036487 ⟸ ENSRNOT00000039059

Ensembl Acc Id:

ENSRNOP00000108806 ⟸ ENSRNOT00000157383

Protein Domains

AGC-kinase C-terminal CNH CRIB PH Phorbol-ester/DAG-type Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q7TT49-F1-model_v2	AlphaFold	Q7TT49	1-1713	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694839

Promoter ID:

EPDNEW_R5361

Type:

initiation region

Name:

Cdc42bpb_1

Description:

CDC42 binding protein kinase beta

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	6	135,830,085 - 135,830,145	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621753	AgrOrtholog
BioCyc Gene	G2FUF-35853	BioCyc
Ensembl Genes	ENSRNOG00000009675	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000039059	ENTREZGENE
	ENSRNOT00000039059.4	UniProtKB/Swiss-Prot
	ENSRNOT00000157383	ENTREZGENE
Gene3D-CATH	1.20.5.340	UniProtKB/Swiss-Prot
	2.30.29.30	UniProtKB/Swiss-Prot
	3.30.60.20	UniProtKB/Swiss-Prot
	Phosphorylase Kinase, domain 1	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
InterPro	AGC-kinase_C	UniProtKB/Swiss-Prot
	C1-like_sf	UniProtKB/Swiss-Prot
	CNH_dom	UniProtKB/Swiss-Prot
	CRIB_dom	UniProtKB/Swiss-Prot
	DAG/PE-bd	UniProtKB/Swiss-Prot
	KELK	UniProtKB/Swiss-Prot
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	MRCKB_STKc	UniProtKB/Swiss-Prot
	Myotonic_dystrophy_kinase_coil	UniProtKB/Swiss-Prot
	PE/DAG-bd	UniProtKB/Swiss-Prot
	PH-like_dom_sf	UniProtKB/Swiss-Prot
	PH_domain	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	Protein_kinase_ATP_BS	UniProtKB/Swiss-Prot
	Rho-assoc_Ser/Thr_Kinase	UniProtKB/Swiss-Prot
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot
KEGG Report	rno:113960	UniProtKB/Swiss-Prot
NCBI Gene	113960	ENTREZGENE
PANTHER	MYOTONIC DYSTROPHY S/T KINASE-RELATED	UniProtKB/Swiss-Prot
	PTHR22988:SF34	UniProtKB/Swiss-Prot
Pfam	C1_1	UniProtKB/Swiss-Prot
	CNH	UniProtKB/Swiss-Prot
	DMPK_coil	UniProtKB/Swiss-Prot
	KELK	UniProtKB/Swiss-Prot
	PH_MRCK	UniProtKB/Swiss-Prot
	Pkinase	UniProtKB/Swiss-Prot
PhenoGen	Cdc42bpb	PhenoGen
PRINTS	DAGPEDOMAIN	UniProtKB/Swiss-Prot
PROSITE	AGC_KINASE_CTER	UniProtKB/Swiss-Prot
	CNH	UniProtKB/Swiss-Prot
	CRIB	UniProtKB/Swiss-Prot
	PH_DOMAIN	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ATP	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot
	ZF_DAG_PE_1	UniProtKB/Swiss-Prot
	ZF_DAG_PE_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000009675	RatGTEx
SMART	CNH	UniProtKB/Swiss-Prot
	PBD	UniProtKB/Swiss-Prot
	S_TK_X	UniProtKB/Swiss-Prot
	S_TKc	UniProtKB/Swiss-Prot
	SM00109	UniProtKB/Swiss-Prot
	SM00233	UniProtKB/Swiss-Prot
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot
	SSF56112	UniProtKB/Swiss-Prot
	SSF57889	UniProtKB/Swiss-Prot
	Tricorn protease domain 2	UniProtKB/Swiss-Prot
UniProt	A0A0G2KB58_RAT	UniProtKB/TrEMBL
	A6KBQ2	ENTREZGENE, UniProtKB/TrEMBL
	A6KBQ3	ENTREZGENE, UniProtKB/TrEMBL
	A6KBQ4_RAT	UniProtKB/TrEMBL
	A6KBQ5_RAT	UniProtKB/TrEMBL
	MRCKB_RAT	UniProtKB/Swiss-Prot
	O54875	ENTREZGENE
	Q7TT49	ENTREZGENE
UniProt Secondary	O54875	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-01-13	Cdc42bpb	CDC42 binding protein kinase beta	Cdc42bpb	CDC42 binding protein kinase beta (DMPK-like)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-26	Cdc42bpb	CDC42 binding protein kinase beta (DMPK-like)	Cdc42bpb	Cdc42 binding protein kinase beta	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-12-14	Cdc42bpb	Cdc42-binding protein kinase beta			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Cdc42bpb				Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains a kinase domain, cysteine-rich domain, pleckstrin-like domain, and p21 GTPase binding domain	632451

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM