Pou2f1 (POU class 2 homeobox 1) - Rat Genome Database

Name: Pou2f1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Pou2f1 (POU class 2 homeobox 1) Rattus norvegicus

Analyze

Symbol:

Pou2f1

Name:

POU class 2 homeobox 1

RGD ID:

621689

Description:

Enables chromatin binding activity; signaling receptor binding activity; and transcription cis-regulatory region binding activity. Involved in liver regeneration and negative regulation of gene expression. Located in nucleus. Orthologous to human POU2F1 (POU class 2 homeobox 1); PARTICIPATES IN forkhead class A signaling pathway; RNA polymerase III transcription pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

NF-A1; oct-1; octamer-binding protein 1; octamer-binding transcription factor 1; OTF-1; POU domain, class 2, transcription factor 1

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	POU2F1 (POU class 2 homeobox 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Pou2f1 (POU domain, class 2, transcription factor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pou2f1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	POU2F1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	POU2F1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pou2f1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	POU2F1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	POU2F1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pou2f1 (POU class 2 homeobox 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	POU2F1 (POU class 2 homeobox 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pou2f1 (POU domain, class 2, transcription factor 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pou2f1b (POU class 2 homeobox 1b)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YOX1	Alliance	DIOPT (Hieranoid\|OrthoFinder)
Caenorhabditis elegans (roundworm):	ceh-18	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	pdm2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	nub	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	78,130,685 - 78,263,363 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	80,748,808 - 80,881,315 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	13	82,052,678 - 82,185,143 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	13	79,299,826 - 79,432,306 (-)	NCBI	Rnor_WKY
Rnor_6.0	13	84,075,316 - 84,217,368 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	84,083,632 - 84,217,366 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	88,957,996 - 89,095,123 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	81,607,326 - 81,739,958 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	81,639,808 - 81,649,784 (-)	NCBI
Celera	13	77,841,488 - 77,973,453 (-)	NCBI		Celera
Cytogenetic Map	13	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(S)-nicotine (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,5-hexanedione (EXP)

2,6-di-tert-butyl-4-methylphenol (ISO)

2-naphthylamine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

acetazolamide (ISO)

acrolein (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

cadmium sulfate (ISO)

caffeine (ISO)

carbamazepine (ISO)

carbon nanotube (ISO)

chlorpyrifos (EXP)

clofibrate (ISO)

cobalt dichloride (ISO)

coenzyme Q10 (ISO)

crocidolite asbestos (ISO)

crotonaldehyde (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

diclofenac (ISO)

dorsomorphin (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

fenbuconazole (ISO)

formaldehyde (ISO)

gallic acid (ISO)

indometacin (ISO)

ionomycin (ISO)

ivermectin (ISO)

Lasiocarpine (ISO)

lead(II) chloride (ISO)

lipopolysaccharide (ISO)

methyl methanesulfonate (ISO)

monocrotaline (ISO)

nicotine (ISO)

ozone (ISO)

paracetamol (ISO)

phenobarbital (ISO)

phorbol 13-acetate 12-myristate (ISO)

pirinixic acid (EXP)

riddelliine (ISO)

rifampicin (ISO)

rotenone (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (ISO)

vincristine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

lens induction in camera-type eye (ISO)

liver regeneration (IEP)

negative regulation of DNA-templated transcription (IEA,ISO)

negative regulation of gene expression (IMP)

olfactory placode formation (ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA,IEA)

transcription by RNA polymerase II (ISO)

Cellular Component

endoplasmic reticulum (IEA,ISO)

intracellular membrane-bounded organelle (ISO)

nucleoplasm (IEA,ISO)

nucleus (IDA,IEA,ISO)

RNA polymerase II transcription regulator complex (IEA,ISO)

transcription regulator complex (ISO)

Molecular Function

chromatin binding (IDA,ISO)

DNA binding (IEA,ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA,IEA,ISO)

identical protein binding (ISO)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IEA,ISO)

RNA polymerase II core promoter sequence-specific DNA binding (IEA,ISO)

sequence-specific DNA binding (ISO)

signaling receptor binding (IPI)

transcription cis-regulatory region binding (IDA)

Molecular Pathway Annotations Click to see Annotation Detail View

forkhead class A signaling pathway (ISO)

RNA polymerase III transcription pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription.	Dumay-Odelot H, etal., Cell Cycle. 2010 Sep 15;9(18):3687-99. Epub 2010 Sep 1.
2.	Regulation of the rat CYP4A2 gene promoter by c-Jun and octamer binding protein-1.	Fiala-Beer E, etal., Int J Biochem Cell Biol. 2007;39(6):1235-47. Epub 2007 Apr 1.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
5.	Functional interaction between Oct-1 and retinoid X receptor.	Kakizawa T, etal., J Biol Chem. 1999 Jul 2;274(27):19103-8.
6.	The POU-domain protein Oct-1 is widely expressed in adult rat organs.	Kambe F, etal., Biochim Biophys Acta 1993 Jan 23;1171(3):307-10.
7.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
8.	A novel transcriptional element which regulates expression of the CYP2D4 gene by Oct-1 and YY-1 binding.	Mizuno D, etal., Biochim Biophys Acta 2003 Jun 19;1627(2-3):121-8.
9.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
10.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
11.	GOA pipeline	RGD automated data pipeline
12.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
14.	Proteomics profiling of nuclear proteins for kidney fibroblasts suggests hypoxia, meiosis, and cancer may meet in the nucleus.	Shakib K, etal., Proteomics. 2005 Jul;5(11):2819-38.
15.	Oct-1 transcription factor is a negative regulator of rat CYP1A1 expression via an octamer sequence in its negative regulatory element.	Sterling K and Bresnick E, Mol Pharmacol. 1996 Feb;49(2):329-37.
16.	Rat DNA sequence associated with a complex form of DNA polymerase alpha in nonregenerating liver interacts with a ubiquitous transcription/replication factor Oct-1.	Timchenko NA, etal., Biomed Sci. 1991;2(6):595-600.
17.	Negative feedback regulation between microRNA let-7g and LOX-1 mediated hypoxia-induced PASMCs proliferation.	Zhang WF, etal., Biochem Biophys Res Commun. 2017 Jul 8;488(4):655-663. doi: 10.1016/j.bbrc.2017.01.073. Epub 2017 Jan 18.

Additional References at PubMed

PMID:1677182	PMID:1690859	PMID:7945330	PMID:7969117	PMID:8131747	PMID:8960364	PMID:9199328	PMID:9242494	PMID:9738004	PMID:10329190	PMID:10541551	PMID:11380252
PMID:11891224	PMID:11937630	PMID:11997177	PMID:12782656	PMID:14729276	PMID:15024082	PMID:15138251	PMID:15252056	PMID:15326124	PMID:15613485	PMID:16002402	PMID:16735694
PMID:17140559	PMID:19617623	PMID:24368669

Genomics

Comparative Map Data

Pou2f1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	78,130,685 - 78,263,363 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	80,748,808 - 80,881,315 (-)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	13	82,052,678 - 82,185,143 (-)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	13	79,299,826 - 79,432,306 (-)	NCBI	Rnor_WKY
Rnor_6.0	13	84,075,316 - 84,217,368 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	84,083,632 - 84,217,366 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	88,957,996 - 89,095,123 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	81,607,326 - 81,739,958 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	81,639,808 - 81,649,784 (-)	NCBI
Celera	13	77,841,488 - 77,973,453 (-)	NCBI		Celera
Cytogenetic Map	13	q23	NCBI

POU2F1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	167,220,885 - 167,427,345 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	1	167,220,876 - 167,427,345 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	167,190,122 - 167,396,582 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	165,456,767 - 165,651,966 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	163,921,800 - 164,116,982	NCBI
Celera	1	140,299,593 - 140,494,792 (+)	NCBI		Celera
Cytogenetic Map	1	q24.2	NCBI
HuRef	1	138,436,084 - 138,642,676 (+)	NCBI		HuRef
CHM1_1	1	168,612,566 - 168,819,039 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	166,572,283 - 166,778,684 (+)	NCBI		T2T-CHM13v2.0

Pou2f1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	165,692,719 - 165,830,318 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	165,692,723 - 165,830,247 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	165,865,150 - 166,002,749 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	165,865,154 - 166,002,678 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	167,805,603 - 167,932,765 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	167,712,147 - 167,839,290 (-)	NCBI		MGSCv36	mm8
Celera	1	168,321,320 - 168,447,672 (-)	NCBI		Celera
Cytogenetic Map	1	H2.3	NCBI
cM Map	1	73.21	NCBI

Pou2f1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	9,553,415 - 9,710,188 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	9,545,122 - 9,710,190 (-)	NCBI	ChiLan1.0	ChiLan1.0

POU2F1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	1	146,439,518 - 146,645,441 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	146,439,581 - 146,633,921 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	1	142,653,296 - 142,860,572 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

POU2F1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	30,975,303 - 31,162,288 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	30,986,181 - 31,162,246 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	30,514,309 - 30,701,250 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	30,796,626 - 30,983,731 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	30,807,446 - 30,984,164 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	30,635,299 - 30,822,385 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	30,667,196 - 30,854,171 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	30,905,692 - 31,092,637 (-)	NCBI		UU_Cfam_GSD_1.0

Pou2f1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	100,760,463 - 100,833,093 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	18,617,572 - 18,678,183 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936481	18,607,212 - 18,679,828 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POU2F1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	83,596,269 - 83,776,430 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	83,592,051 - 83,776,465 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	91,261,062 - 91,451,596 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POU2F1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	61,599,803 - 61,800,615 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	61,611,330 - 61,654,173 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	63,335,365 - 63,537,158 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pou2f1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624826	5,334,366 - 5,493,821 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624826	5,334,365 - 5,501,421 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Pou2f1
333 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	199
Count of miRNA genes:	144
Interacting mature miRNAs:	158
Transcripts:	ENSRNOT00000047488
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	101056920	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	8897350	101631289	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	20605871	101339738	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	30395351	101056920	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	31241331	93395974	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	34535218	79535218	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	37262092	82262092	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	37415584	80753406	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	37415584	82415584	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	38433408	83433408	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	39754544	84754544	Rat
12879444	Bp397	Blood pressure QTL 397			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45049404	90049404	Rat
12879471	Bp398	Blood pressure QTL 398			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45514719	90514719	Rat
12879441	Bp396	Blood pressure QTL 396			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45699983	90699983	Rat
1298066	Bp159	Blood pressure QTL 159		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	46088046	91088046	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	13	46197976	84753113	Rat
1641901	Alcrsp6	Alcohol response QTL 6			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	13	52362171	97362171	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	56056920	101056920	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	59874408	85581182	Rat
12879475	Bp400	Blood pressure QTL 400			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	61825626	106807694	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	0.0001	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	13	65103704	106807694	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	0.0001	femur morphology trait (VT:0000559)	femur cross-sectional area (CMO:0001661)	13	65103704	106807694	Rat
8655945	Rf61	Renal function QTL 61	3.6		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	13	69060519	86800898	Rat
1331783	Bp221	Blood pressure QTL 221	3.72886		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	69060519	86800898	Rat
1300166	Kidm6	Kidney mass QTL 6	3.93		kidney mass (VT:0002707)	single kidney wet weight to body weight ratio (CMO:0000622)	13	69060519	86800898	Rat
11530006	Niddm72	Non-insulin dependent diabetes mellitus QTL 72		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	13	74023918	80753406	Rat
8655959	Pur32	Proteinuria QTL 32	8.4		urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	74023918	97213863	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number (CMO:0001461)	13	74862117	85581182	Rat
2293341	Glom15	Glomerulus QTL 15	9.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	13	74862117	101339893	Rat

Markers in Region

RH136721

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	78,188,116 - 78,188,246 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	84,142,192 - 84,142,321	NCBI	Rnor6.0
Rnor_5.0	13	89,020,747 - 89,020,876	UniSTS	Rnor5.0
RGSC_v3.4	13	81,663,942 - 81,664,071	UniSTS	RGSC3.4
Celera	13	77,898,364 - 77,898,493	UniSTS
Cytogenetic Map	13	q23	UniSTS

BF401612

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	78,193,746 - 78,193,844 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	84,147,826 - 84,147,923	NCBI	Rnor6.0
Rnor_5.0	13	89,026,381 - 89,026,478	UniSTS	Rnor5.0
RGSC_v3.4	13	81,669,880 - 81,669,977	UniSTS	RGSC3.4
Celera	13	77,903,994 - 77,904,091	UniSTS
RH 3.4 Map	13	476.9	UniSTS
Cytogenetic Map	13	q23	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium			8		16				28	3	9	8
Low	3	43	48	40	3	40	8	11	46	32	32	3	8
Below cutoff			1	1		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001100639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769591	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598656	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598657	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005492196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005492197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005492198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_595497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D12978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV214198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U17013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000047488 ⟹ ENSRNOP00000044416

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	78,130,839 - 78,263,363 (-)	Ensembl
Rnor_6.0 Ensembl	13	84,083,806 - 84,217,332 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000087096 ⟹ ENSRNOP00000072711

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	78,130,685 - 78,263,261 (-)	Ensembl
Rnor_6.0 Ensembl	13	84,083,632 - 84,217,366 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000115647 ⟹ ENSRNOP00000092131

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	78,130,839 - 78,244,103 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118670 ⟹ ENSRNOP00000094292

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	78,130,839 - 78,263,261 (-)	Ensembl

RefSeq Acc Id:

NM_001100639 ⟹ NP_001094109

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,130,827 - 78,263,261 (-)	NCBI
Rnor_6.0	13	84,083,794 - 84,217,332 (-)	NCBI
Rnor_5.0	13	88,957,996 - 89,095,123 (-)	NCBI
RGSC_v3.4	13	81,607,326 - 81,739,958 (-)	RGD
Celera	13	77,841,488 - 77,973,453 (-)	RGD

Sequence:

show sequence

AAATGGCGGACGGAGGAGCAGCGAGTCAAGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGA
CTCAAGAATGAACAATCCGTCAGAAACCAATAAGTCATCTATGGAGAGTGGAGATGCCAGCACA
GGCACACAGACCAATGGCCTGGACTTTGAGAAGCAGCCCGTGCCTGTCGGAGGGGCCATCTCCA
CAGCCCAGGCCCAGGCTTTCCTTGGGCATCTTCACCAGGTCCAGCTCGCTGGGACAAGTTTACA
GGCTGCTGCTCAATCTTTAAATGTACAGTCTAAATCTAGTGAAGAGTCCGGAGATTCGCAGCAG
TCAAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGTCAGCCATTCCCCAGACTCAGCTAATGCTGG
CCGGGGGACAGATAACTGGGCTCACACTGACACCAGCCCAGCAACAGCTTTTACTACAGCAGGC
CCAGGCCCAGGCCCAGCTCCTGGCTGCTGCAGTGCAGCAACACTCCGCCAGCCAACAGCACAGT
GCTGCTGGGGCCACCATCTCAGCCTCCGCTGCCACACCCATGACGCAGATCCCCCTGTCTCAGC
CCATACAGATTGCACAGGATCTTCAACAATTGCAACAGCTTCAGCAGCAAAATCTCAACTTGCA
ACAGTTCGTCTTGGTGCACCCAACCACCAACTTGCAACCAGCACAGTTTATCATCTCTCAGACC
CCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTTTAACGCAACTACCTCAGCAAAGCC
AAGCCAACCTCCTACAGCCACAGCCAAGCATCACCCTCACGTCCCAGCCTACCACCCCAACTCG
CACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGACAACACCAAAGCGAATTGAT
ACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAATTTGCCAAGACTTTTAAAC
AAAGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTTGCTATGGGGAAATTATATGG
AAATGACTTCAGCCAAACCACCATCTCTCGCTTTGAAGCCTTGAACCTCAGCTTTAAGAACATG
TGCAAGTTAAAGCCCCTTTTAGAGAAGTGGCTAAATGACGCGGAGAACCTCTCATCTGATTCTA
CAGCATCTAGCCCAAGTGCTTTGAATTCTCCAGGGTTGGGGGCTGAGGGCTTGAATCGTAGGAG
GAAAAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAAAAGAGTTTCATGGAGAAT
CAAAAGCCTACCTCGGAAGATATCACCTTGATTGCTGAACAGCTCAATATGGAGAAGGAGGTGA
TTCGTGTTTGGTTTTGTAACCGCCGCCAGAAGGAGAAAAGAATCAACCCGCCAAGCAGTGGTGG
GACCAGCAGCTCACCAATCAAAGCAATTTTCCCCAGCCCAACCTCACTGGTGGCAACCACTCCA
AGCCTTGTGACAAGCAGTACAGCAACTACCCTCACAGTCAACCCTGTGCTCCCCTTAACCAGTG
CTGCCATGACTAATCTTTCTCTTACAGGCACTACAGACTCCACGTCCAACAACACGGCCACCGT
GATTTCCACAGCACCCCCTGCTTCCTCAGCAGTCACATCTCCCTCCTTGAGTCCCTCTCCTTCT
GCCTCAGCCTCCACCTCTGAGGCCTCTAGTGCCAGCGAGACCAGCACAACACAGACCACCTCCA
CACCTCTCCCCTCCCCTCTTGGAGCCAGCCAGGTGATGGTGACAGCCTCTGGCTTACAGACTGC
AGCCGCCGCTGCTCTCCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCTATGGCT
GCTGCTGCAGGACTCAATCCAGGCCTGATGGCACCCTCACAGTTTGCTGCTGGAGGTGCCTTAC
TCAGTCTCAATCCGGGGACCCTGGGTGGGGCTCTCAGCCCGGCCCTGATGAGCAACAGTACACT
GGCAACCATTCAAGCTCTTGCTTCTAGTGGCTCTCTTCCAATAACATCTCTGGATGCAACTGGG
AACCTGGTATTCGCCAATGCAGGAGGAGCCCCCAACATCGTGACTGCCCCTCTGTTCCTGAACC
CTCAGAACCTCTCTCTGCTCACCAGCAACCCAGTAAGCTTGGTTTCTGCCGCTGCAGCCTCCAC
AGGGAACTCCGCACCTACAGCCAGCCTTCATGCCTCCTCCACCTCAACTGAGTCCATCCAGAAC
TCTCTGTTCACAGTGGCCTCTGCCAGCGGGGCTGCCTCCACCACCACAGCTGCCTCCAAGGCAC
AGTGAGCTGGACGCAGAGCTGGGGCTTTCCTCACTGCAGGGTGATAGGCTGGCTATCAGCTGGC
TAAAACATGACGCCTGTCATTGGCTTCCTCCCACCATGTTGTGAGGATGAGGAAGACATGGAGA
GAAGAAAAAAATTACACATAACAACAAAAAAAAAGAATGGAGACAGGACAACGTTTGCCTAATT
TTATAATAAAAACAATGTCTTTTCAGGATTGCTTCATGGATTGGAGAACTTTCTAACCAAAAAT
TTTAAA

hide sequence

RefSeq Acc Id:

XM_008769591 ⟹ XP_008767813

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,207,744 (-)	NCBI
Rnor_6.0	13	84,083,781 - 84,153,685 (-)	NCBI

Sequence:

show sequence

GTGTGTGCTTACATACATTTATGTACACCATGTGTGTACAGGTGCCCAAGAAGACCAGAAGACC
AAAAGGGCATTTGATCTGGAACTAGATTTGTGGATAATTATGAGCCACATGATGTAAGTTCTTG
GAACGGAACCTGGCACCTTCGTAGGAGCAGCATGTGCTGTTAACTGCCTAGCCCTCTCCTTAGC
CCTAAAGAGGCTGTAGTTTGATTCTTATGTGCTGATAATGATGGGAAAACACCAAGTCCTGTAT
GTGTTTGTAAGAGCAGAAACCTTTGTCAGTACAGTCGTCATACTGTACTTTATAACACAGTAAT
GTTGAATCTGAACTAAGGGGCCTGAAGCGGTGTTGGCTGGCACTGTGTGGCGGCATGTGCAGCA
CATAGGTTCATACTGTATGTCTAGAACCAAGGCTGCAGTGAAGGTGTATGGTATAACACTAGAC
AAATACTGACTGTAACATCCTGTTTATTACACGTATATGTATTACACACATCTTTTTTTCATAA
CATTTTAAAAATCAGACATTAGCTTGAAGGTAAATACAAGTAAAAACAGGTTATTACTGAGAGG
TGCCCTACTTCCAACTACTGTATTACTTATATGCACTTAATCTTAAATATGATGTCTTTGCTAC
CAAGTATCAGTCTCCTTCCTCAGTACTCAAGCCATTTTAGTTTCTGCTTTAGTCTCTTTCCTTC
CTCTCTTTCTCACCTTCTCTCCTTCCTCCCCACCCCTTTAGTTCCCTGAAAGTGGAGCTCAGCC
TTAAGGTGTGCAGGTCTTGCAAGAACTTGGATCTTGATGTCAGTAAAATCTGGTTTGAAATCCT
ACCCTGAATTATTAATATGCCATTGAGTAGAAAGTGCTTTAGTTTTCTGTACTTTCGTTTCTTT
ATTCCTAATAACTTAATAATGTTTGTATTAACTTCCTGAGTTCTTTATAATAATATCTGAAATA
TTACAACTTAATTTTAAACTTTAATAAACATGTGCTTAATAAGACAATATGTAGAGAACTTCTT
TCTCACACATGCAGAGGTCCATTAAGTGGTATCGCTTGACAATACTTATTCTGCAGCTACCTGG
CCCATTTAGGGATGATTCATATTCTAAGTAACAAGCTCTCTCCTCTTGAGTTTGATGGGAGTAT
GTTGCATAATAGGCAACTGTCAGCTAATCATCTCTGTTAATTTGGTAGTATAAATGAATATCTG
CTCTCAAAGATGCTTTTGTCCACTCTCCCCTGCTTCTGCGTTTATGCGGTTGTCCTGTTTTAAG
TAGGACTTTCTCCTGACAGTGTGTGTTAATAACTGGAAAATTCCCTATCAGTAGACTAGCGCCA
TCTTGACAAGCCTGCTCTGCTCCTACCTTGCTAATTGTTTCCTTGCGATTATTTGGATTGTGTA
GAAAGCCTTTTGCAAATCCTCTTATTACTGAAGTCATTGTTGCCAGCAGGAATAAGATTAAAGG
TGCTTAAGTCTGTGGAGTTGTTTCTAATTTGTTCATGTCATTTCAGTGGCATTTTAACAGAACT
CTGCCTCCTGTCCCTTCCTTCTCCCCTGGTACTATCTCAAGTTAGGTCCAAGATGCCTAGCCAT
TGGAAGAAATCTCATTTTATCCTCCTAATTATTATGCTGGCACTCAGGAGATAATTTTTCCCTT
CATGCACTGCCAATTAATATGCAAATGTGCTGATAAATATTTATGTATTCATTTAAATTATGCA
GGGAGTGCTTTCAGTGTATTCTGTAAATGAATTGTTCCTGGACTTCAAAGTGCTGGCTGCTGTG
CTAACGAGGAGAGATTTGCATAAGGCCCTAATCACACGCATACTGATTAAGCTTCATTATGGAA
ACTGCCAGCTGCAATCTTTGTTTCTATTTTATTACAAAAAGGGGAACTTTTCATGCTTCAGTTG
CCTTGACAATGTCAGTCCTAGCTGGTAGAAGAGACTAAAACTCCTCTGAGCAACTGAAGTTTCC
TTATTCAGTTGAAGATTGCTATGGTGTAACTGAAGTTGTAGTTTGCTTCTCTTGTTAATCCACT
TTCCACTCCTCCCACCCTTGTTCTCTTAAGAACACAGTACAGATTTGTTAGAAATAGTAGTATT
TTCCCCACCCCAAACGCTACCTGTTCCTTCTTGCTTTGGACTGTCTGCACCTCCTGAAGATTTT
ACAGCCATGCTGGACTGCAGTGACTGTGTTCTAGACTCAAGAATGAACAATCCGTCAGAAACCA
ATAAGTCATCTATGGAGAGTGGAGATGCCAGCACAGGCACACAGACCAATGGCCTGGACTTTGA
GAAGCAGCCCGTGCCTGTCGGAGGGGCCATCTCCACAGCCCAGGCCCAGGCTTTCCTTGGGCAT
CTTCACCAGGTCCAGCTCGCTGGGACAAGTTTACAGGCTGCTGCTCAATCTTTAAATGTACAGT
CTAAATCTAGTGAAGAGTCCGGAGATTCGCAGCAGTCAAGCCAGCCTTCCCAGCAGCCTTCAGT
GCAGTCAGCCATTCCCCAGACTCAGCTAATGCTGGCCGGGGGACAGATAACTGGGCTCACACTG
ACACCAGCCCAGCAACAGCTTTTACTACAGCAGGCCCAGGCCCAGGCCCAGCTCCTGGCTGCTG
CAGTGCAGCAACACTCCGCCAGCCAACAGCACAGTGCTGCTGGGGCCACCATCTCAGCCTCCGC
TGCCACACCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATTGCACAGGATCTTCAACAA
TTGCAACAGCTTCAGCAGCAAAATCTCAACTTGCAACAGTTCGTGTTGGTGCACCCAACCACCA
ACTTGCAACCAGCACAGTTTATCATCTCTCAGACCCCCCAGGGCCAGCAGGGTCTCCTGCAAGC
GCAAAATCTTTTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGCCACAGCCAAGC
ATCACCCTCACGTCCCAGCCTACCACCCCAACTCGCACAATAGCAGCAACCCCAATTCAGACAC
TTCCACAGAGCCAGACAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCT
TGAGGAGCTTGAGCAATTTGCCAAGACTTTTAAACAAAGACGAATCAAACTTGGATTCACTCAG
GGTGATGTTGGGCTTGCTATGGGGAAATTATATGGAAATGACTTCAGCCAAACCACCATCTCTC
GCTTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTAAAGCCCCTTTTAGAGAAGTG
GCTAAATGACGCGGAGAACCTCTCATCTGATTCTACAGCATCTAGCCCAAGTGCTTTGAATTCT
CCAGGGTTGGGGGCTGAGGGCTTGAATCGTAGGAGGAAAAAACGCACCAGCATAGAGACCAACA
TCCGTGTGGCCTTAGAAAAGAGTTTCATGGAGAATCAAAAGCCTACCTCGGAAGATATCACCTT
GATTGCTGAACAGCTCAATATGGAGAAGGAGGTGATTCGTGTTTGGTTTTGTAACCGCCGCCAG
AAGGAGAAAAGAATCAACCCGCCAAGCAGTGGTGGGACCAGCAGCTCACCAATCAAAGCAATTT
TCCCCAGCCCAACCTCACTGGTGGCAACCACTCCAAGCCTTGTGACAAGCAGTACAGCAACTAC
CCTCACAGTCAACCCTGTGCTCCCCTTAACCAGTGCTGCCATGACTAATCTTTCTCTTACAGGC
ACTACAGACTCCACGTCCAACAACACGGCCACCGTGATTTCCACAGCACCCCCTGCTTCCTCAG
CAGTCACATCTCCCTCCTTGAGTCCCTCTCCTTCTGCCTCAGCCTCCACCTCTGAGGCCTCTAG
TGCCAGCGAGACCAGCACAACACAGACCACCTCCACACCTCTCCCCTCCCCTCTTGGAGCCAGC
CAGGTGATGGTGACAGCCTCTGGCTTACAGACTGCAGCCGCCGCTGCTCTCCAAGGAGCTGCAC
AGTTGCCAGCAAATGCCAGTCTTGCTGCTATGGCTGCTGCTGCAGGACTCAATCCAGGCCTGAT
GGCACCCTCACAGTTTGCTGCTGGAGGTGCCTTACTCAGTCTCAATCCGGGGACCCTGGGTGGG
GCTCTCAGCCCGGCCCTGATGAGCAACAGTACACTGGCAACCATTCAAGCTCTTGCTTCTAGTG
GCTCTCTTCCAATAACATCTCTGGATGCAACTGGGAACCTGGTATTCGCCAATGCAGGAGGAGC
CCCCAACATCGTGACTGCCCCTCTGTTCCTGAACCCTCAGAACCTCTCTCTGCTCACCAGCAAC
CCAGTAAGCTTGGTTTCTGCCGCTGCAGCCTCCACAGGGAACTCCGCACCTACAGCCAGCCTTC
ATGCCTCCTCCACCTCAACTGAGTCCATCCAGAACTCTCTGTTCACAGTGGCCTCTGCCAGCGG
GGCTGCCTCCACCACCACAGCTGCCTCCAAGGCACAGTGAGCTGGACGCAGAGCTGGGGCTTTC
CTCACTGCAGGGTGATAGGCTGGCTATCAGCTGGCTAAAACATGACGCCTGTCATTGGCTTCCT
CCCACCATGTTGTGAGGATGAGGAAGACATGGAGAGAAGAAAAAAATTACACATAACAACAAAA
AAAAAGAATGGAGACAGGACAACGTTTGCCTAATTTTATAATAAAAACAATGTCTTTTCAGGAT
TGCTTCATGGATTGGAGAACTTTCTAACCAAAAATTTTAAAGAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008769597 ⟹ XP_008767819

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,245 (-)	NCBI
Rnor_6.0	13	84,083,781 - 84,171,188 (-)	NCBI

Sequence:

show sequence

TGAGCCTAGCCTTTAACGGCTGAGCCATCTCTCCAGCCCAATGTTTATCATATTAAAAACCAGA
CCACAGTGTACTTTAGCTGCCTCCCTACTTCTGGGATTAAAGGCATGAGCCACCACTTCTCAGC
TTTAGGGTGAGCTTAATAAAACTCTAAAGTCACGGAAACTTAGAATAAGAGGAGGCTATCACAA
TCTAAGCCTCACTCCCCTTAGAAGGGTTGTTTTATTCTCCAGTGCCTTGGCAGGCGTTTAGACC
TCACCTGCTGTTGAGGGTTTTCTTTGGGCACTCATTGTGATGGGTTTTCAGCGACCTTCTGAGT
TGAATAAGGAGGTTCAGGCTAGGCTCCTGTAAGAAATGGCAATGGAGATAGGTCGTGAAGGACG
AGATAGAACGTGAACATTTACAGAGTTTTTAATACCAGGAACCAGGTGGGACAAGGAGGAGGAG
CAGGGCTGTCTCAGGAAGACAGGAATATGGATACTCCATGAGGCTGGGTGAGGACGGTACAGAA
GTGACGAAGTGCAAGTTTCTTGCAGTGTGACTTTCTATAGCCATCAGATGAATTATTAAAAATG
TAACTGTGATATGATCAAATTTGCATCAGGAATTATAGCAGAACAATCAGCAATAGAAAGAAGC
TTCTTTTCCCATGAACTTCAGATTGTTTTAAGTATGTAATTTAGTATTTAAATCAACTTAAAAA
TACTTTAAAAGTGGATTGGAACATGGGCACAGAACAAGTTGCAAAAATGCTAGGCAGATTTGGC
AGAGTAATTTCTAAACAGGAAAAAGTGGTCCTGAAATTTATATTTCAAAGGCATTTCATAAAGG
AATTTTGAAGAAACTAATAGTAGATCTTGGTTAATTAATCAAGTACTAGTATTATAGATTTAGA
TATGAAGAGAAAGTAAGAGATACAGAGAACAGAATGAGATTTAAAATGCAGTTGGTGTTCTAGA
GAAGACTTCCCAATTAATTATTTCTAGTGCACACCCTCTGAGAACCATCCACAGGTATGGAGAG
GCACTCACTAGGAACAGTGGGAACCTCAGGACACTTATAAAGGGGCAACCTTAATTTTATACAG
CTAGACTTTTTATAAAGACGAACGATTTACATAGGTAAACTGAGTCGTTTATAACCATATCCTT
TAATAAAGGGGCTTCTAGGAAACATTTTTAAGATAGAAGGAAGTTGAACTCAGAAGGAAAGACT
GAAGTACAAGAAGGGTGAACAAAAAGATGGAAATATGAATGACTATTTGTAAATTCCATACAAC
TTATTTTAACAGCAGCTATCAGCTTGTTCAAAATCTTGTGCTTCCATAGTCAACCATCGCAGAC
AGTAGCATAAGAATTTTTCAAAAGAAGCTGTAATCTTAGTCCTCTCTCAAGATTATTTTCATCT
TACAAATGTCTCTGATAATGATTTGAAATGAATGAATGTCTTTTTTAGAAATATATTTATTTGC
AGGCTGCTGAGCAAATTTTAAGTTAGAATAAGAAAATTTCAAATGAATCTAATGGAACTCCATT
AACTGACCTTGCTCTGTAATGATCAGTCTTAACTGTCAGTGTTTTTACCGCTTGCATTTGGAAT
TTACTAGTGAGAATACTTAGCTTTCATACACACAGCTTTTCACAATTTAAATACTTATCTTCCC
TAACTCAGAGGTTGTAAGGTCCTGTCCTGGTTTTTATTTTATATTTGGCTCTGTAATGTATGGA
GAACTCAACCCCACATTAAAACGCTTGGTCTCAGATATTTGATTGACTGTAGGATGTCATACAG
ATGATATGGCTTATTCTTACTTATTTACACAGTAGTAACACTGTATTGTAAAATCAGTAATTGT
TAACTTAAGTTGAACTAAAGCAAGATTTTTATGTAAGACAAAAGACAATACCAAAGAATCTTGG
TGCGAGATATATACATATATATCCCCAAGCCATGTTAGAGAATTTAAACATAATAATTTCTTTA
GAATAAACTATATTATATTGATTCGCTAATTATTTATATAGGTTTTCTACACAGTGAGTTCTCT
TTTTTTCCACAATGAATTCTTTGAAAATGTATGAAAACATTGTTTCTTGTTGAAACATGAGTAT
GCATATATTCTTTCTGTGGAATTTTTAATCCTGGTTTCTATTTTGAGAGTAAAGCTGTAGAAAT
CTCTGCCATGGTTTTTGTGGATTATGAAAATAATCGAGAAGCTGTAATTATAATAGACGGGTTC
TCTTAATGTCTCGTTGAGTCTTTTCCTCGGTGTCACCATAGTTAGTAAAATGTGATTGCACTGT
AGAGGGCTTTTCTCTCTAAGGGAGACCAGTGATCCCTTTAAGGGTCATTGTGAATTTTTTGTTG
TAATTGCAGAATGAGTGAGTTTGAATATGAAGGAAGAAGAGCCTAAATAGGAGAGATGTTCTGG
GGCTGCCCTTCTCTACGAAAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCCTTTTAATTACCAA
ACTACTCTCAATTTTCAGTGAAACAATTCAAAGAAAGAATGCAGTCTTTCTATACCTGACTCAA
GAATGAACAATCCGTCAGAAACCAATAAGTCATCTATGGAGAGTGGAGATGCCAGCACAGGCAC
ACAGACCAATGGCCTGGACTTTGAGAAGCAGCCCGTGCCTGTCGGAGGGGCCATCTCCACAGCC
CAGGCCCAGGCTTTCCTTGGGCATCTTCACCAGGTCCAGCTCGCTGGGACAAGTTTACAGGCTG
CTGCTCAATCTTTAAATGTACAGTCTAAATCTAGTGAAGAGTCCGGAGATTCGCAGCAGTCAAG
CCAGCCTTCCCAGCAGCCTTCAGTGCAGTCAGCCATTCCCCAGACTCAGCTAATGCTGGCCGGG
GGACAGATAACTGGGCTCACACTGACACCAGCCCAGCAACAGCTTTTACTACAGCAGGCCCAGG
CCCAGGCCCAGCTCCTGGCTGCTGCAGTGCAGCAACACTCCGCCAGCCAACAGCACAGTGCTGC
TGGGGCCACCATCTCAGCCTCCGCTGCCACACCCATGACGCAGATCCCCCTGTCTCAGCCCATA
CAGATTGCACAGGATCTTCAACAATTGCAACAGCTTCAGCAGCAAAATCTCAACTTGCAACAGT
TCGTGTTGGTGCACCCAACCACCAACTTGCAACCAGCACAGTTTATCATCTCTCAGACCCCCCA
GGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTTTAACGCAACTACCTCAGCAAAGCCAAGCC
AACCTCCTACAGCCACAGCCAAGCATCACCCTCACGTCCCAGCCTACCACCCCAACTCGCACAA
TAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGACAACACCAAAGCGAATTGATACTCC
CAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAATTTGCCAAGACTTTTAAACAAAGA
CGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTTGCTATGGGGAAATTATATGGAAATG
ACTTCAGCCAAACCACCATCTCTCGCTTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAA
GTTAAAGCCCCTTTTAGAGAAGTGGCTAAATGACGCGGAGAACCTCTCATCTGATTCTACAGCA
TCTAGCCCAAGTGCTTTGAATTCTCCAGGGTTGGGGGCTGAGGGCTTGAATCGTAGGAGGAAAA
AACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAAAAGAGTTTCATGGAGAATCAAAA
GCCTACCTCGGAAGATATCACCTTGATTGCTGAACAGCTCAATATGGAGAAGGAGGTGATTCGT
GTTTGGTTTTGTAACCGCCGCCAGAAGGAGAAAAGAATCAACCCGCCAAGCAGTGGTGGGACCA
GCAGCTCACCAATCAAAGCAATTTTCCCCAGCCCAACCTCACTGGTGGCAACCACTCCAAGCCT
TGTGACAAGCAGTACAGCAACTACCCTCACAGTCAACCCTGTGCTCCCCTTAACCAGTGCTGCC
ATGACTAATCTTTCTCTTACAGGCACTACAGACTCCACGTCCAACAACACGGCCACCGTGATTT
CCACAGCACCCCCTGCTTCCTCAGCAGTCACATCTCCCTCCTTGAGTCCCTCTCCTTCTGCCTC
AGCCTCCACCTCTGAGGCCTCTAGTGCCAGCGAGACCAGCACAACACAGACCACCTCCACACCT
CTCCCCTCCCCTCTTGGAGCCAGCCAGGTGATGGTGACAGCCTCTGGCTTACAGACTGCAGCCG
CCGCTGCTCTCCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCTATGGCTGCTGC
TGCAGGACTCAATCCAGGCCTGATGGCACCCTCACAGTTTGCTGCTGGAGGTGCCTTACTCAGT
CTCAATCCGGGGACCCTGGGTGGGGCTCTCAGCCCGGCCCTGATGAGCAACAGTACACTGGCAA
CCATTCAAGCTCTTGCTTCTAGTGGCTCTCTTCCAATAACATCTCTGGATGCAACTGGGAACCT
GGTATTCGCCAATGCAGGAGGAGCCCCCAACATCGTGACTGCCCCTCTGTTCCTGAACCCTCAG
AACCTCTCTCTGCTCACCAGCAACCCAGTAAGCTTGGTTTCTGCCGCTGCAGCCTCCACAGGGA
ACTCCGCACCTACAGCCAGCCTTCATGCCTCCTCCACCTCAACTGAGTCCATCCAGAACTCTCT
GTTCACAGTGGCCTCTGCCAGCGGGGCTGCCTCCACCACCACAGCTGCCTCCAAGGCACAGTGA
GCTGGACGCAGAGCTGGGGCTTTCCTCACTGCAGGGTGATAGGCTGGCTATCAGCTGGCTAAAA
CATGACGCCTGTCATTGGCTTCCTCCCACCATGTTGTGAGGATGAGGAAGACATGGAGAGAAGA
AAAAAATTACACATAACAACAAAAAAAAAGAATGGAGACAGGACAACGTTTGCCTAATTTTATA
ATAAAAACAATGTCTTTTCAGGATTGCTTCATGGATTGGAGAACTTTCTAACCAAAAATTTTAA
AGAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008769599 ⟹ XP_008767821

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI
Rnor_6.0	13	84,083,781 - 84,217,368 (-)	NCBI

Sequence:

show sequence

GGTTTATCGACCGGGCGATTTTGGTTAAAATATTCAAAATGGCGGACGGAGGAGCAGCGAGTCA
AGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTCAGAAACC
AATAAGTCATCTATGGAGAGTGGAGATGCCAGCACAGGCACACAGACCAATGGCCTGGACTTTG
AGAAGCAGCCCGTGCCTGTCGGAGGGGCCATCTCCACAGCCCAGGCCCAGGCTTTCCTTGGGCA
TCTTCACCAGGTCCAGCTCGCTGGGACAAGTTTACAGGCTGCTGCTCAATCTTTAAATGTACAG
TCTAAATCTAGTGAAGAGTCCGGAGATTCGCAGCAGTCAAGCCAGCCTTCCCAGCAGCCTTCAG
TGCAGTCAGCCATTCCCCAGACTCAGCTAATGCTGGCCGGGGGACAGATAACTGGGCTCACACT
GACACCAGCCCAGCAACAGCTTTTACTACAGCAGGCCCAGGCCCAGGCCCAGCTCCTGGCTGCT
GCAGTGCAGCAACACTCCGCCAGCCAACAGCACAGTGCTGCTGGGGCCACCATCTCAGCCTCCG
CTGCCACACCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATTGCACAGGATCTTCAACA
ATTGCAACAGCTTCAGCAGCAAAATCTCAACTTGCAACAGTTCGTGTTGGTGCACCCAACCACC
AACTTGCAACCAGCACAGTTTATCATCTCTCAGACCCCCCAGGGCCAGCAGGGTCTCCTGCAAG
CGCAAAATCTTTTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGCCACAGCCAAG
CATCACCCTCACGTCCCAGCCTACCACCCCAACTCGCACAATAGCAGCAACCCCAATTCAGACA
CTTCCACAGAGCCAGACAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACC
TTGAGGAGCTTGAGCAATTTGCCAAGACTTTTAAACAAAGACGAATCAAACTTGGATTCACTCA
GGGTGATGTTGGGCTTGCTATGGGGAAATTATATGGAAATGACTTCAGCCAAACCACCATCTCT
CGCTTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTAAAGCCCCTTTTAGAGAAGT
GGCTAAATGACGCGGAGAACCTCTCATCTGATTCTACAGCATCTAGCCCAAGTGCTTTGAATTC
TCCAGGGTTGGGGGCTGAGGGCTTGAATCGTAGGAGGAAAAAACGCACCAGCATAGAGACCAAC
ATCCGTGTGGCCTTAGAAAAGAGTTTCATGGAGAATCAAAAGCCTACCTCGGAAGATATCACCT
TGATTGCTGAACAGCTCAATATGGAGAAGGAGGTGATTCGTGTTTGGTTTTGTAACCGCCGCCA
GAAGGAGAAAAGAATCAACCCGCCAAGCAGTGGTGGGACCAGCAGCTCACCAATCAAAGCAATT
TTCCCCAGCCCAACCTCACTGGTGGCAACCACTCCAAGCCTTGTGACAAGCAGTACAGCAACTA
CCCTCACAGTCAACCCTGTGCTCCCCTTAACCAGTGCTGCCATGACTAATCTTTCTCTTACAGG
CACTACAGACTCCACGTCCAACAACACGGCCACCGTGATTTCCACAGCACCCCCTGCTTCCTCA
GCAGTCACATCTCCCTCCTTGAGTCCCTCTCCTTCTGCCTCAGCCTCCACCTCTGAGGCCTCTA
GTGCCAGCGAGACCAGCACAACACAGACCACCTCCACACCTCTCCCCTCCCCTCTTGGAGCCAG
CCAGGTGATGGTGACAGCCTCTGGCTTACAGACTGCAGCCGCCGCTGCTCTCCAAGGAGCTGCA
CAGTTGCCAGCAAATGCCAGTCTTGCTGCTATGGCTGCTGCTGCAGGACTCAATCCAGGCCTGA
TGGCACCCTCACAGTTTGCTGCTGGAGGTGCCTTACTCAGTCTCAATCCGGGGACCCTGGGTGG
GGCTCTCAGCCCGGCCCTGATGAGCAACAGTACACTGGCAACCATTCAAGCTCTTGCTTCTAGT
GGCTCTCTTCCAATAACATCTCTGGATGCAACTGGGAACCTGGTATTCGCCAATGCAGGAGGAG
CCCCCAACATCGTGACTGCCCCTCTGTTCCTGAACCCTCAGAACCTCTCTCTGCTCACCAGCAA
CCCAGATTGCTTCATGGATTGGAGAACTTTCTAACCAAAAATTTTAAAGAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017598656 ⟹ XP_017454145

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,255 (-)	NCBI
Rnor_6.0	13	84,083,781 - 84,171,188 (-)	NCBI

Sequence:

show sequence

TGAGCCTAGCCTTTAACGGCTGAGCCATCTCTCCAGCCCAATGTTTATCATATTAAAAACCAGA
CCACAGTGTACTTTAGCTGCCTCCCTACTTCTGGGATTAAAGGCATGAGCCACCACTTCTCAGC
TTTAGGGTGAGCTTAATAAAACTCTAAAGTCACGGAAACTTAGAATAAGAGGAGGCTATCACAA
TCTAAGCCTCACTCCCCTTAGAAGGGTTGTTTTATTCTCCAGTGCCTTGGCAGGCGTTTAGACC
TCACCTGCTGTTGAGGGTTTTCTTTGGGCACTCATTGTGATGGGTTTTCAGCGACCTTCTGAGT
TGAATAAGGAGGTTCAGGCTAGGCTCCTGTAAGAAATGGCAATGGAGATAGGTCGTGAAGGACG
AGATAGAACGTGAACATTTACAGAGTTTTTAATACCAGGAACCAGGTGGGACAAGGAGGAGGAG
CAGGGCTGTCTCAGGAAGACAGGAATATGGATACTCCATGAGGCTGGGTGAGGACGGTACAGAA
GTGACGAAGTGCAAGTTTCTTGCAGTGTGACTTTCTATAGCCATCAGATGAATTATTAAAAATG
TAACTGTGATATGATCAAATTTGCATCAGGAATTATAGCAGAACAATCAGCAATAGAAAGAAGC
TTCTTTTCCCATGAACTTCAGATTGTTTTAAGTATGTAATTTAGTATTTAAATCAACTTAAAAA
TACTTTAAAAGTGGATTGGAACATGGGCACAGAACAAGTTGCAAAAATGCTAGGCAGATTTGGC
AGAGTAATTTCTAAACAGGAAAAAGTGGTCCTGAAATTTATATTTCAAAGGCATTTCATAAAGG
AATTTTGAAGAAACTAATAGTAGATCTTGGTTAATTAATCAAGTACTAGTATTATAGATTTAGA
TATGAAGAGAAAGTAAGAGATACAGAGAACAGAATGAGATTTAAAATGCAGTTGGTGTTCTAGA
GAAGACTTCCCAATTAATTATTTCTAGTGCACACCCTCTGAGAACCATCCACAGGTATGGAGAG
GCACTCACTAGGAACAGTGGGAACCTCAGGACACTTATAAAGGGGCAACCTTAATTTTATACAG
CTAGACTTTTTATAAAGACGAACGATTTACATAGGTAAACTGAGTCGTTTATAACCATATCCTT
TAATAAAGGGGCTTCTAGGAAACATTTTTAAGATAGAAGGAAGTTGAACTCAGAAGGAAAGACT
GAAGTACAAGAAGGGTGAACAAAAAGATGGAAATATGAATGACTATTTGTAAATTCCATACAAC
TTATTTTAACAGCAGCTATCAGCTTGTTCAAAATCTTGTGCTTCCATAGTCAACCATCGCAGAC
AGTAGCATAAGAATTTTTCAAAAGAAGCTGTAATCTTAGTCCTCTCTCAAGATTATTTTCATCT
TACAAATGTCTCTGATAATGATTTGAAATGAATGAATGTCTTTTTTAGAAATATATTTATTTGC
AGGCTGCTGAGCAAATTTTAAGTTAGAATAAGAAAATTTCAAATGAATCTAATGGAACTCCATT
AACTGACCTTGCTCTGTAATGATCAGTCTTAACTGTCAGTGTTTTTACCGCTTGCATTTGGAAT
TTACTAGTGAGAATACTTAGCTTTCATACACACAGCTTTTCACAATTTAAATACTTATCTTCCC
TAACTCAGAGGTTGTAAGGTCCTGTCCTGGTTTTTATTTTATATTTGGCTCTGTAATGTATGGA
GAACTCAACCCCACATTAAAACGCTTGGTCTCAGATATTTGATTGACTGTAGGATGTCATACAG
ATGATATGGCTTATTCTTACTTATTTACACAGTAGTAACACTGTATTGTAAAATCAGTAATTGT
TAACTTAAGTTGAACTAAAGCAAGATTTTTATGTAAGACAAAAGACAATACCAAAGAATCTTGG
TGCGAGATATATACATATATATCCCCAAGCCATGTTAGAGAATTTAAACATAATAATTTCTTTA
GAATAAACTATATTATATTGATTCGCTAATTATTTATATAGGTTTTCTACACAGTGAGTTCTCT
TTTTTTCCACAATGAATTCTTTGAAAATGTATGAAAACATTGTTTCTTGTTGAAACATGAGTAT
GCATATATTCTTTCTGTGGAATTTTTAATCCTGGTTTCTATTTTGAGAGTAAAGCTGTAGAAAT
CTCTGCCATGGTTTTTGTGGATTATGAAAATAATCGAGAAGCTGTAATTATAATAGACGGGTTC
TCTTAATGTCTCGTTGAGTCTTTTCCTCGGTGTCACCATAGTTAGTAAAATGTGATTGCACTGT
AGAGGGCTTTTCTCTCTAAGGGAGACCAGTGATCCCTTTAAGGGTCATTGTGAATTTTTTGTTG
TAATTGCAGAATGAGTGAGTTTGAATATGAAGGAAGAAGAGCCTAAATAGGAGAGATGTTCTGG
GGCTGCCCTTCTCTACGAAAGCTCTTTTCCCAGACGAGTTGAGTAAATGCTGACCGTACATGAA
GAGTAGAAACCAGAGTTAAATTGATTCCTTAGGAAAAACATTCCTCGAATAAGGTACACCCGTG
GTGCAACTGTCCCAGTTTTAGAAAACAACATGGCAAGCAAAAGAAAGGAGACAATCCATGATCC
CAGTCCATGAGATAATGCCACCCACATTCAAGGTGGATCTTCTCTCAGTTAAACTAGTCTGAAA
GCACCTTCACAGATATGCTCAGAGACTGGAAAAGTAAGAAGAGCTTTCCTGCCCTTTTAATTAC
CAAACTACTCTCAATTTTCAGTGAAACAATTCAAAGAAAGAATGCAGTCTTTCTATACCTGACT
CAAGAATGAACAATCCGTCAGAAACCAATAAGTCATCTATGGAGAGTGGAGATGCCAGCACAGG
CACACAGACCAATGGCCTGGACTTTGAGAAGCAGCCCGTGCCTGTCGGAGGGGCCATCTCCACA
GCCCAGGCCCAGGCTTTCCTTGGGCATCTTCACCAGGTCCAGCTCGCTGGGACAAGTTTACAGG
CTGCTGCTCAATCTTTAAATGTACAGTCTAAATCTAGTGAAGAGTCCGGAGATTCGCAGCAGTC
AAGCCAGCCTTCCCAGCAGCCTTCAGTGCAGTCAGCCATTCCCCAGACTCAGCTAATGCTGGCC
GGGGGACAGATAACTGGGCTCACACTGACACCAGCCCAGCAACAGCTTTTACTACAGCAGGCCC
AGGCCCAGGCCCAGCTCCTGGCTGCTGCAGTGCAGCAACACTCCGCCAGCCAACAGCACAGTGC
TGCTGGGGCCACCATCTCAGCCTCCGCTGCCACACCCATGACGCAGATCCCCCTGTCTCAGCCC
ATACAGATTGCACAGGATCTTCAACAATTGCAACAGCTTCAGCAGCAAAATCTCAACTTGCAAC
AGTTCGTGTTGGTGCACCCAACCACCAACTTGCAACCAGCACAGTTTATCATCTCTCAGACCCC
CCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTTTAACGCAACTACCTCAGCAAAGCCAA
GCCAACCTCCTACAGCCACAGCCAAGCATCACCCTCACGTCCCAGCCTACCACCCCAACTCGCA
CAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGACAACACCAAAGCGAATTGATAC
TCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAATTTGCCAAGACTTTTAAACAA
AGACGAATCAAACTTGGATTCACTCAGGGTGATGTTGGGCTTGCTATGGGGAAATTATATGGAA
ATGACTTCAGCCAAACCACCATCTCTCGCTTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTG
CAAGTTAAAGCCCCTTTTAGAGAAGTGGCTAAATGACGCGGAGAACCTCTCATCTGATTCTACA
GCATCTAGCCCAAGTGCTTTGAATTCTCCAGGGTTGGGGGCTGAGGGCTTGAATCGTAGGAGGA
AAAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAAAAGAGTTTCATGGAGAATCA
AAAGCCTACCTCGGAAGATATCACCTTGATTGCTGAACAGCTCAATATGGAGAAGGAGGTGATT
CGTGTTTGGTTTTGTAACCGCCGCCAGAAGGAGAAAAGAATCAACCCGCCAAGCAGTGGTGGGA
CCAGCAGCTCACCAATCAAAGCAATTTTCCCCAGCCCAACCTCACTGGTGGCAACCACTCCAAG
CCTTGTGACAAGCAGTACAGCAACTACCCTCACAGTCAACCCTGTGCTCCCCTTAACCAGTGCT
GCCATGACTAATCTTTCTCTTACAGGCACTACAGACTCCACGTCCAACAACACGGCCACCGTGA
TTTCCACAGCACCCCCTGCTTCCTCAGCAGTCACATCTCCCTCCTTGAGTCCCTCTCCTTCTGC
CTCAGCCTCCACCTCTGAGGCCTCTAGTGCCAGCGAGACCAGCACAACACAGACCACCTCCACA
CCTCTCCCCTCCCCTCTTGGAGCCAGCCAGGTGATGGTGACAGCCTCTGGCTTACAGACTGCAG
CCGCCGCTGCTCTCCAAGGAGCTGCACAGTTGCCAGCAAATGCCAGTCTTGCTGCTATGGCTGC
TGCTGCAGGACTCAATCCAGGCCTGATGGCACCCTCACAGTTTGCTGCTGGAGGTGCCTTACTC
AGTCTCAATCCGGGGACCCTGGGTGGGGCTCTCAGCCCGGCCCTGATGAGCAACAGTACACTGG
CAACCATTCAAGCTCTTGCTTCTAGTGGCTCTCTTCCAATAACATCTCTGGATGCAACTGGGAA
CCTGGTATTCGCCAATGCAGGAGGAGCCCCCAACATCGTGACTGCCCCTCTGTTCCTGAACCCT
CAGAACCTCTCTCTGCTCACCAGCAACCCAGTAAGCTTGGTTTCTGCCGCTGCAGCCTCCACAG
GGAACTCCGCACCTACAGCCAGCCTTCATGCCTCCTCCACCTCAACTGAGTCCATCCAGAACTC
TCTGTTCACAGTGGCCTCTGCCAGCGGGGCTGCCTCCACCACCACAGCTGCCTCCAAGGCACAG
TGAGCTGGACGCAGAGCTGGGGCTTTCCTCACTGCAGGGTGATAGGCTGGCTATCAGCTGGCTA
AAACATGACGCCTGTCATTGGCTTCCTCCCACCATGTTGTGAGGATGAGGAAGACATGGAGAGA
AGAAAAAAATTACACATAACAACAAAAAAAAAGAATGGAGACAGGACAACGTTTGCCTAATTTT
ATAATAAAAACAATGTCTTTTCAGGATTGCTTCATGGATTGGAGAACTTTCTAACCAAAAATTT
TAAAGAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039090298 ⟹ XP_038946226

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,255 (-)	NCBI

RefSeq Acc Id:

XM_039090299 ⟹ XP_038946227

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,212,822 (-)	NCBI

RefSeq Acc Id:

XM_039090301 ⟹ XP_038946229

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,255 (-)	NCBI

RefSeq Acc Id:

XM_039090302 ⟹ XP_038946230

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,242 (-)	NCBI

RefSeq Acc Id:

XM_039090303 ⟹ XP_038946231

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,265 (-)	NCBI

RefSeq Acc Id:

XM_039090304 ⟹ XP_038946232

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,263 (-)	NCBI

RefSeq Acc Id:

XR_005492196

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI

RefSeq Acc Id:

XR_005492197

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI

RefSeq Acc Id:

XR_005492198

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI

RefSeq Acc Id:

XR_595497

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	13	78,120,617 - 78,263,306 (-)	NCBI
Rnor_6.0	13	84,075,316 - 84,217,368 (-)	NCBI

Sequence:

show sequence

GGTTTATCGACCGGGCGATTTTGGTTAAAATATTCAAAATGGCGGACGGAGGAGCAGCGAGTCA
AGATGAGAGTTCAGCCGCGGCGGCAGCAGCAGCAGACTCAAGAATGAACAATCCGTCAGAAACC
AATAAGTCATCTATGGAGAGTGGAGATGCCAGCACAGGCACACAGACCAATGGCCTGGACTTTG
AGAAGCAGCCCGTGCCTGTCGGAGGGGCCATCTCCACAGCCCAGGCCCAGGCTTTCCTTGGGCA
TCTTCACCAGGTCCAGCTCGCTGGGACAAGTTTACAGGCTGCTGCTCAATCTTTAAATGTACAG
TCTAAATCTAGTGAAGAGTCCGGAGATTCGCAGCAGTCAAGCCAGCCTTCCCAGCAGCCTTCAG
TGCAGTCAGCCATTCCCCAGACTCAGCTAATGCTGGCCGGGGGACAGATAACTGGGCTCACACT
GACACCAGCCCAGCAACAGCTTTTACTACAGCAGGCCCAGGCCCAGGCCCAGCTCCTGGCTGCT
GCAGTGCAGCAACACTCCGCCAGCCAACAGCACAGTGCTGCTGGGGCCACCATCTCAGCCTCCG
CTGCCACACCCATGACGCAGATCCCCCTGTCTCAGCCCATACAGATTGCACAGGATCTTCAACA
ATTGCAACAGCTTCAGCAGCAAAATCTCAACTTGCAACAGTTCGTGTTGGTGCACCCAACCACC
AACTTGCAACCAGCACAGTTTATCATCTCTCAGACCCCCCAGGGCCAGCAGGGTCTCCTGCAAG
CGCAAAATCTTTTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGCCACAGCCAAG
CATCACCCTCACGTCCCAGCCTACCACCCCAACTCGCACAATAGCAGCAACCCCAATTCAGACA
CTTCCACAGAGCCAGACAACACCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACC
TTGAGGAGCTTGAGCAATTTGCCAAGACTTTTAAACAAAGACGAATCAAACTTGGATTCACTCA
GGGTGATGTTGGGCTTGCTATGGGGAAATTATATGGAAATGACTTCAGCCAAACCACCATCTCT
CGCTTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTAAAGCCCCTTTTAGAGAAGT
GGCTAAATGACGCGGAGAACCTCTCATCTGATTCTACAGCATCTAGCCCAAGTGCTTTGAATTC
TCCAGGGTTGGGGGCTGAGGGCTTGAATCGTAGGAGGAAAAAACGCACCAGCATAGAGACCAAC
ATCCGTGTGGCCTTAGAAAAGAGTTTCATGGAGAATCAAAAGCCTACCTCGGAAGATATCACCT
TGATTGCTGAACAGCTCAATATGGAGAAGGAGGTGATTCGTGTTTGGTTTTGTAACCGCCGCCA
GAAGGAGAAAAGAATCAACCCGCCAAGCAGTGGTGGGACCAGCAGCTCACCAATCAAAGCAATT
TTCCCCAGCCCAACCTCACTGGTGGCAACCACTCCAAGCCTTGTGACAAGCAGTACAGCAACTA
CCCTCACAGTCAACCCTGTGCTCCCCTTAACCAGTGCTGCCATGACTAATCTTTCTCTTACAGG
CACTACAGACTCCACGTCCAACAACACGGCCACCGTGATTTCCACAGCACCCCCTGCTTCCTCA
GCAGTCACATCTCCCTCCTTGAGTCCCTCTCCTTCTGCCTCAGCCTCCACCTCTGAGGCCTCTA
GTGCCAGCGAGACCAGCACAACACAGACCACCTCCACACCTCTCCCCTCCCCTCTTGGAGCCAG
CCAGGTGATGGTGACAGCCTCTGGCTTACAGACTGCAGCCGCCGCTGCTCTCCAAGGAGCTGCA
CAGTTGCCAGCAAATGCCAGTCTTGCTGCTATGGCTGCTGCTGCAGGACTCAATCCAGGCCTGA
TGGCACCCTCACAGTTTGCTGCTGGAGGTGCCTTACTCAGTCTCAATCCGGGGACCCTGGGTGG
GGCTCTCAGCCCGGCCCTGATGAGCAACAGTACACTGGCAACCATTCAAGCTCTTGCTTCTAGT
GGCTCTCTTCCAATAACATCTCTGGATGCAACTGGGAACCTGGTATTCGCCAATGCAGGAGGAG
CCCCCAACATCGTGACTGCCCCTCTGTTCCTGAACCCTCAGAACCTCTCTCTGCTCACCAGCAA
CCCAGTAAGCTTGGTTTCTGCCGCTGCAGCCTCCACAGGGAACTCCGCACCTACAGCCAGCCTT
CATGCCTCCTCCACCTCAACTGAGTCCATCCAGAACTCTCTGTTCACAGTGGCCTCTGCCAGCG
GGGCTGCCTCCACCACCACAGCTGCCTCCAAGGCACAGTGAGCTGGACGCAGAGCTGGGGCTTT
CCTCACTGCAGGGTGATAGGCTGGCTATCAGCTGGCTAAAACATGACGCCTGTCATTGGCTTCC
TCCCACCATGTTGTGAGGATGAGGAAGACATGGAGAGAAGAAAAAAATTACACATAACAACAAA
AAAAAAGAATGGAGACAGGACAACGTTTGCCTAATTTTATAATAAAAACAATGTCTTTTCAGGA
TTGCTTCATGGATTGGAGAACTTTCTAACCAAAAATTTTAAAGAAAAAAAAAAAACAGAAACAA
AATATCAAAAACAGACAGACAAAAATAAGTGAAAGGACTACTTATCATTTCCAGCAGTCATGGT
GACAAGCTAAGGGTGTTTCTAGACTACATAAATGAGCCCATTGAAAAGGAAGAGCTTGTGAAAA
TGGATGAAGATGGATGAGGGTAATTTAGAGTTTAAATTCCCCATTTGCCAATGTCCTCTTGTTA
TACTATCTCTACCACAGTTTTCCCAAATGACTGGATCACTGCAGTGAAGCTCTCAGTTGCCCTC
ACTGCAGTGAAAGGGTCCCATCTGGTGTCTGAGGGCACTCGCTTCAGTCCTGGTGGTCTGCACT
TTGAGCTGGGAGTGGTTCTCCTTCTGATACTTTGCTTACGCCACAGGAAACTTGGATTCTGTGC
AGTTGTCTGCAGAGAGAAATTCAGAGAGGCAGGGACAGACACAAATGTGTACCTTCTATTGTTA
TTTTTCTGTTGGGAGAAGGTCATGTTAAAGGTCAGAAACATTTTTTTTTTTTTGGTTCCTTTTG
GTTATTTCCCAGAGTCTTTAATTTTCACCCCTGAATAATTTCTTTTACTGTAAACTTTTCCTAA
AATCCCTCCAAAAATCAGTGAGCTGCAAGCAGGGAAGCTAACAGATGCTCATCCACCTGTTTTG
TATGGTGTGGGGGTTTTGTTTGTTTTGTTTTGTTTTTTAAACTAAGCTTGAACCAAAGTCAATT
TTTAGCAAGCTGCTGTACTGATGGACTAGTTGTGATGTGCAGTTCAAACACATTGAGGAGATAG
ATGCTACTGACAATTTCTTACTCATTTTTCTTGATTAATTTTATGTGAAAGTTGCTGCTTGTTT
TTAATCTTTTATGTTGGTAAATTGTAATATCCTCTGGGCAGACATTACCTTGATTTTAGCTACT
AGTTTGTTTAAGTCAGTGTGTAAATAGCATGGCGTGTCAGTTACTGCTTCTCCCCTCCCCACCC
ACCTTTTCTCTCGTTAATTTAATGTTTTGTCTTGACTTAACACTCTAACCTTAGTCTGTGTGCA
TGGTTTTATGCTTGTCAATACTGTTTCTGCCCCTAGCAGAGAGTCCCTCCCTTGGGAGTCAGGA
GGTTAGGAGGGAGAATTCAGGGAGAGAAATGCTGATTACCCACCTGACAGATTAGAAGTTATAG
CACTAATCTCCAGAATTGCTACCAAAGGAAGTAGATCCCAAGGGGCTCTGGCCCAGGGGTTAAG
GAGGACAGAGAAAGACTGTTTATTTCATCCAATGTGATTAAAAGAGTCTTTTTCCCAAATAAGA
GTCCCCTACAGACTTTGATTTTAAAAATGATAGTACATTTTAAGTTCTAGCCCAGTGGTCCGTC
AGTCCCTTCTCTGTCTGTGGTCTCTAGTGGGTTTGAGAAGGGATTGCTGCCTTTTCATGTAGTT
CATTTTTGAGGATAGACTTTAAAACCAGCATAAATACTGTATTGAGAAGAAGGATCTTTAGATA
AAGATAACTTTAATTTTTCCCTACCCTTTTTCATGTGTTTAAAATTAAGTTGTGAAATGAAAGG
TACTTTATACATATGTACATGAAACACTACTAAACTCTCTGGGGGTGTTCAGGCTACAATAGCT
TCCATCACCACTCTAAATGTTCTGTTAATGCTACTATATTAAACCCTTGGCTAGTTTTTACTTG
ATACCATCTTGGTTTTTTTTTTTTTTTTTTTAATGATTTCAAATGCTCTTTGAGCTGACAACTA
TCTTCTAAGCTAAAGTACTCAGACTTAAAACATTCAGCTGCCTTTTTCTGAGAGAGTATAGATA
CTAAAGGGGTCATCTGACTAAAAGAAACATGCAGTCGAGAGTTTCTGCGTTTCCTGAATAAACG
CCAGGAAGGTTGTTATAACCTGTTACTTCATTCTTCCTTTCTTCCCCCTGATATTTATGCTTAC
TTTATTTCATCCCTAAATTTAGTTAACACAGAGTAAGCCAAAGACAAATTTTAAATACATTTTT
AGGGACACTATATTTGCCTGTGATAATGGGCCCTCCCTGGAGAGTAGTGAATGTAACTGTTTAA
TCCTGTTTAAGCAATGCAGTTTGGCATAAACTTTATTTATTTCCTGTGTAAATCTGAATGACAA
CAGAAAAATCTATAAGGCTTCTCACAAGAGCAGTATTGCTGTTCTAGGAATAGTAAAGTGCTCT
GTTACCTTGAATGTCTCTGAAGCCCTATAGGCAGCTCCATAAAATGAGGAAACATTCTTCCTGT
CCATTTACTTGCTGGTGTCTGTTGTCAGGAAGGTCAGCACCATCCTGTTTATGTAACTTGTGAC
TCCAAAATGGAACCAAAGGAATCCGGCTTTCATCTTGCGTAGGACCAGCCTGCTTATATTTCAT
GAGCTTTATTAGACATTTTTTAAAGGGACAATATCAATCAATTGAAAGGGTTTGGGTGTGATCA
TCTTGCCAGTATGTTCTGTGTTGTTATTCATTTGTTTTAGGGAAAAGCACAATTATACCTCTCT
AATATTATTGTGTCTATTATCTATCCTTCGATTATTAGAAAGATAGGGAAATAATCTCTTCACT
ATCCAGAAGCACAGGTTTTTGCTTGACAATATTTCACTTCAGCTCAGTCATTAACATTTAACTT
GCTGGAAATGCCAGGTACATTTGTAAATATAGGGATGTTATGGAAGGAAAAAATACTTTAGTTC
CTAGTCTGACGTTCTTCATAAGCCATGTCGTCCTCACAAATCTTTCTTGACCAAGAGAGAATAG
GTCGTTGAAGTAGGAAGGCAAACAGACATCTATTTCCTGTTCTTCCTCAAGAGAGGAGCAGTGC
TGCCCGCCCTGGTGTGCAGAAGGCAGTTTCCTGCTGGCAGCCTGGGCTGGCCCAGCCCTGAGGA
ACTCGCAGACCAGCCTATGACCTGAGCACTTGGTAATGCAGAAGGAAGGGCCTCGGCAGCTCAG
TAAGAGAGCCTGAACAGAAACCCTATGTTGGCTTCTGAAGTTGAGGAACATGAAGTGTACTTAC
TCCTCAGACTCTATTAGAGCTGTATACATTTAAGATTACCAATGCTAATGTAAGAAAAATACTT
AAAGACCTGAAACCCATAATTGTCCAAGTGGGCAGAAATTGATGTAATTATTTATACCTGTATG
AGTTCACTTTCATTTGTGGGTGTGAACAGCATTTACCATGTCATATTGTTCATCTAAAGAGACC
CGTGACCATTTTGAAGTCATTTTCAGATACTTGTGAAAATAAGGCTTTCTTAATATTTTTGATT
TTTGAGGAAGAAAAGAAATTCTTTGCCATTCTTCTGAGAGTAAGACACTGTCCCACAGGTTTGC
ATGGATGACACCACAATGTACACACAAGCATCAATAGAAAAGGTGGAGATGGGTTACTTTGATT
ATTAAAGGTTGGTGGGCCACTCCCTGCTTCATCCTCTCTTCCTCTCTGGAGAGTAAGTGTGAGG
TTCTACCAGGGTGGGCAGGGAGCATCTTCCTCAGAAATCATCCAGTCCGTACCCAGTATGTGCT
ATGATTTGTGAACTAGGGTTTCTTCTGACCATCATTCTACTCATGACCAGTAAACCGATCCGTA
GTCTGACTCCTCTGCTCTTGGCCTCTGCTAGAACCAGTGAGCTGGAGTATGTCACACGTGTCGA
TATGCTCAGTGACCTGGATCTCTCTGCCTCTTTTCCTCCCTCTTTGTTTTGAATGGTGGAACCT
TAATCTGTGAGATAATGCTCGTGCGTAACAGCTTCTGGCACCTTCATAAAATACCTCAGCGTAG
CTTAGCATTGTTACAGAACTGGTTTTAGACTGAAAAACCAAATAAGTATAAGAAAAAAATCTCT
ATAAATAGTGGAAATAATTCTAGCTGTAGTGTTTAGTTGAACTAATGTTTATTATGGTTGATAA
ACATGATTGATGCTGTATGCATTTGGGATCCTGTTTATAGAGTTAGGGAGGGTTGGGTTGGGAG
AAAGGAGAAATTGATTATGTTAGAAGGAAAATATTGCTTGTGTGTATTTGTTTTTCTTTGTATC
TGTCTTGCCAAAGGAAACTTGATATTCCCTGTGAATGGGTTGGGGGTTTGAGGCCTCTATATGA
TCTGATATGCAGCACAGTATGCAGAAACAACCGTGCAGGTGATATATGGGGTGTCCAGTAGGTT
CAGGGTGCCCAGGGTTGGGGGCAGGTTTACAGCCTTCCTGTCTGTGGTTTCCATGCCTTCACCC
CAGACCTGCCAGACTCTCCTGATTGGTGATCCCTTACCCCTGCACATAGCTAAAGCTTAGGCAG
AGGAAGGGTGCGCACATGTCCCGGTGTGCAGAGGAAGAGAGAGATGGGCATGGACCCGAGGGAT
GGAGAGGAAAATGACAGTGAGATGAGTCCTCTTTTGTCATGGTAGTGAATGCTGTGCTGGTAGT
AGCCCAACATTTTTAAAACTTTATTTCCTTTTCTTATACCAAGGATAATTTTGTCTAGACCAAA
ACACAGACGAGGAATCCAAGCCAAGAAGTCGAAAGCTAACCACACACTTGGCGCCTGTAATGAG
GTGGGGCATTTAAGGATTGGGTGATGATTTAAGGATTGTGGGAAATGTGAACGAGAAATTATAT
TGGGTTAGGAAAAAATTTAAGACCTTTCTGTCCTTGTTCTGGGGTAGACTTTCTTGGCTTCCTG
AGTTCTAATATAAACTATATCTCAAGAACTAATTTTTTTAACATGTCCCTTCTCACAGAACTTG
AGTGGGATTTGATTTTGATACCAAAGACACTGCTGTACATTGCTTATCCTTAAGTTTTCCAGAC
TCAAAGGCGATAGAGCAAAGCGCTGAGGTTGGGGAAAGCTTCGTCTCGTCTCTGTTCTTCCCTT
TGTCCTCACGCCTTCCTCACCTTTTGAAAGATGTCTGTTTGGTTACTCTGGCTTTGGGAAGAGA
TTGATTTTGTTCTTCCCTGCTGCTCTGTGAAGATTGGTAAAATTGCTCAGCAAAATATTGATAT
TCTTGCTAAGAAAGAATTGTGGGAGTGCAAAAAAAAAATAGTAGTAGAACTTTTATTTACCTTT
ATCTAATTCATCCAAATAAAACTAGCCCTCCCAACCTGTTAGAGTAACAGTCAGGAGTTAGTGA
TGAAGAGCAGACCGCAGCCAAATGATGTTCTCTTGCTCTCCTATAGAGCTGTCTTGCTCCACGG
TGTCTTTAGGATGTGGCTGCTGGCACGTTAAGAAGTTCATTGGTTGGCATACTTTTGGTTAACA
CAGACAGGGAGAGAGAGAGGGAAGACCAGCAAATGTGATCAGGTTGCTGAACTTCACGGAAGCT
TTACTTGCTATCATTCTGACATTATGTGGAGTAGTGTTAGTGCTGTGTGGCTTTACAGAGTGGT
AGGTAGGTTCGTGTGGTGATAGGGATATTGACAGTAAGAGCACTGAAACAAATGCTGTGGAGGA
ATGGTGTGCATCACGAACACCATTTCAGCTGTGAGAGTGACGCTCCCGAGTGGAGAGAGGGAAC
GAAACCATTTAGGACCCGTCTGCATCCCTGAGTCTGCCCACACTGCACAGGTCTCCACCACCCT
TACCATGTGCTGGCTCAAATCCAGAACTCCGTCAGGAAGAGCAGAAAGCCAGACTGATTGGCTG
GGGAGGGAGGACCTGGGGTCTCCTGCAGTTTCCCGTGTCTTCTTCACTTGCCCTTCACTGCAAC
GGCCACAGCCCCACGGCAGCAACCTCACGCTTCCTCCCTACATTGATAGTGGTATTGAGCTCTG
TCGCTGCATCCCAAGGTCTGCAGGTAGCTCAGGACAGTGCAGTTCCAACAGGGAGGCATCTGCA
TGGGAGCTCATGTGATCTCATTGGAGAAAAGTGGACAGAGTCAATGCCCATCCCCCCCCCCAGA
GTGTTCGGGGTCTGAGAATGACAGGAGGAAACATAGGAGTGAAGTGAACTAGTTAGTGCTACCC
TGGTTAGGTTTAAAGTTGCAAACAGTGGGAGTGGGGGTAGTGTGTTCAAGGTTCTGTGACCATA
CTGCATTGACTATAAATGGTAAATGGTGAGAGAAAGACTTCTTCCCACTCCTTACCTCTGCTTC
TGTGGGAATGTGTGTGTTACTCAGTCCACAGGAGGGCTCCCTGAAGGAAGCATTCCTAGAGTGG
CCCTCAGCTATTGCTCTCATATGTGGTAGTGAAGGCTAGGTGTGAGTAAGAGTGGGGTTTCTGC
CCACCGCCTATTCAGGAGCTGTTGTGTACCTCATTTCTAACTCTGACTGAGTATCTTGCTTTAA
CTTCCTCTCAACCCTACAGAGTTGCCAAGTCTGCCCTCCCTCTTCTCAGCAACATAAACTCTGG
CCTATAGCATCATAAGACCTGTCACCTGGGGTGGGACTGCCCCTCCCTCAGCCCATCCCCAAGC
CTCTGAATGTCTCTGCTTTTAAGCTACTACAGACTGAGGGCAAATTGCAATCTCCTGTTTGTTT
TTGTTGCTAGGGATCCTCACAGGTCTTTTACCATGTTCCCCACCACCTTACCTTCCAGGACGGC
CAGCTCCCCTCTCCCATCTGCCCCATATTTCTAACTGCTGGCTATCCATCAGCTTCTGACTCGC
CGTTCCCCCCTGAGGCCATGGGATTCTGCTCATTGCCAGGACTTGGTAGAAAGGACACCAAAGG
TTCATTTACACTGACTTAAGCTACACATTTCACTTGTTTCCTGTGTGACATGACCAAAAAATTT
CCAAATATTTAAGTTTATTATTAATATTGTAATAATAATTATTATTTGACAATCTTATATCCGA
CGGGCTTTCTGGAAGCTGCTTCTCCAGCCCTTTCAACATTTTCTTTGAATGTAGTTCTTAACTT
GCAGTTCCCAACCCCAAAGTTGGGGGAAGAAAAAGCTTAGCCAAGTCAGGTCATTATACTGCTG
CTATAAGCCAGGGGAGGGTGGTTTCTTTGTTTTGTTTTTCCATTTCCAGCCAAAACCAAAGATT
TCTTAATGATTGTATAAACTCAAAACAAACAAAAAAACCAAAGAAAAGGGAAGTCTTCAGCCTC
AATCCAGTCTGTGGCATCCTGGCACTTGGAGGCATGCCCAAGGGTAGGTGTCGACACCTCTGGC
CAGCTCAGAAGGGCAGCAAGTCTTTTCTAAGTTGAGGGATTCATTCAGATGCACGCTCGGGAGC
TTTGACCCTTGCTGACTGACTTGTAAGCAGAGCATGCATCAAGGAAATGGGAACATCAGATTTT
TCAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001094109	(Get FASTA)	NCBI Sequence Viewer
	XP_008767813	(Get FASTA)	NCBI Sequence Viewer
	XP_008767819	(Get FASTA)	NCBI Sequence Viewer
	XP_008767821	(Get FASTA)	NCBI Sequence Viewer
	XP_017454145	(Get FASTA)	NCBI Sequence Viewer
	XP_038946226	(Get FASTA)	NCBI Sequence Viewer
	XP_038946227	(Get FASTA)	NCBI Sequence Viewer
	XP_038946229	(Get FASTA)	NCBI Sequence Viewer
	XP_038946230	(Get FASTA)	NCBI Sequence Viewer
	XP_038946231	(Get FASTA)	NCBI Sequence Viewer
	XP_038946232	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA53185	(Get FASTA)	NCBI Sequence Viewer
	BAA02355	(Get FASTA)	NCBI Sequence Viewer
	EDM09304	(Get FASTA)	NCBI Sequence Viewer
	EDM09305	(Get FASTA)	NCBI Sequence Viewer
	EDM09306	(Get FASTA)	NCBI Sequence Viewer
	EDM09307	(Get FASTA)	NCBI Sequence Viewer
	EDM09308	(Get FASTA)	NCBI Sequence Viewer
	EDM09309	(Get FASTA)	NCBI Sequence Viewer
	EDM09310	(Get FASTA)	NCBI Sequence Viewer
	EDM09311	(Get FASTA)	NCBI Sequence Viewer
	P31503	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001094109 ⟸ NM_001100639

- UniProtKB:

P31503 (UniProtKB/Swiss-Prot), F1LRD7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADGGAASQDESSAAAAAAADSRMNNPSETNKSSMESGDASTGTQTNGLDFEKQPVPVGGAIST
AQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSSEESGDSQQSSQPSQQPSVQSAIPQTQLMLA
GGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQP
IQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQ
ANLLQPQPSITLTSQPTTPTRTIAATPIQTLPQSQTTPKRIDTPSLEEPSDLEELEQFAKTFKQ
RRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDST
ASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVI
RVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSTATTLTVNPVLPLTSA
AMTNLSLTGTTDSTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTST
PLPSPLGASQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPGLMAPSQFAAGGALL
SLNPGTLGGALSPALMSNSTLATIQALASSGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNP
QNLSLLTSNPVSLVSAAAASTGNSAPTASLHASSTSTESIQNSLFTVASASGAASTTTAASKAQ

hide sequence

RefSeq Acc Id:	XP_008767821 ⟸ XM_008769599
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K3N5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADGGAASQDESSAAAAAAADSRMNNPSETNKSSMESGDASTGTQTNGLDFEKQPVPVGGAIST AQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSSEESGDSQQSSQPSQQPSVQSAIPQTQLMLA GGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQP IQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQ ANLLQPQPSITLTSQPTTPTRTIAATPIQTLPQSQTTPKRIDTPSLEEPSDLEELEQFAKTFKQ RRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDST ASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVI RVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSTATTLTVNPVLPLTSA AMTNLSLTGTTDSTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTST PLPSPLGASQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPGLMAPSQFAAGGALL SLNPGTLGGALSPALMSNSTLATIQALASSGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNP QNLSLLTSNPDCFMDWRTF hide sequence

RefSeq Acc Id:

XP_008767819 ⟸ XM_008769597

- Peptide Label:

isoform X2

- Sequence:

show sequence

MNNPSETNKSSMESGDASTGTQTNGLDFEKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAA
AQSLNVQSKSSEESGDSQQSSQPSQQPSVQSAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQA
QAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQF
VLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQPQPSITLTSQPTTPTRTI
AATPIQTLPQSQTTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGND
FSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKK
RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTS
SSPIKAIFPSPTSLVATTPSLVTSSTATTLTVNPVLPLTSAAMTNLSLTGTTDSTSNNTATVIS
TAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLPSPLGASQVMVTASGLQTAAA
AALQGAAQLPANASLAAMAAAAGLNPGLMAPSQFAAGGALLSLNPGTLGGALSPALMSNSTLAT
IQALASSGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASTGN
SAPTASLHASSTSTESIQNSLFTVASASGAASTTTAASKAQ

hide sequence

RefSeq Acc Id:	XP_008767813 ⟸ XM_008769591
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6AEY3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLDCSDCVLDSRMNNPSETNKSSMESGDASTGTQTNGLDFEKQPVPVGGAISTAQAQAFLGHLH QVQLAGTSLQAAAQSLNVQSKSSEESGDSQQSSQPSQQPSVQSAIPQTQLMLAGGQITGLTLTP AQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQ QLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQPQPSIT LTSQPTTPTRTIAATPIQTLPQSQTTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGD VGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPG LGAEGLNRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKE KRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSTATTLTVNPVLPLTSAAMTNLSLTGTT DSTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLPSPLGASQV MVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPGLMAPSQFAAGGALLSLNPGTLGGAL SPALMSNSTLATIQALASSGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNLSLLTSNPV SLVSAAAASTGNSAPTASLHASSTSTESIQNSLFTVASASGAASTTTAASKAQ hide sequence

RefSeq Acc Id:

XP_017454145 ⟸ XM_017598656

- Peptide Label:

isoform X2

- Sequence:

show sequence

MNNPSETNKSSMESGDASTGTQTNGLDFEKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAA
AQSLNVQSKSSEESGDSQQSSQPSQQPSVQSAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQA
QAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQF
VLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQPQPSITLTSQPTTPTRTI
AATPIQTLPQSQTTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGND
FSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKK
RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTS
SSPIKAIFPSPTSLVATTPSLVTSSTATTLTVNPVLPLTSAAMTNLSLTGTTDSTSNNTATVIS
TAPPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLPSPLGASQVMVTASGLQTAAA
AALQGAAQLPANASLAAMAAAAGLNPGLMAPSQFAAGGALLSLNPGTLGGALSPALMSNSTLAT
IQALASSGSLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASTGN
SAPTASLHASSTSTESIQNSLFTVASASGAASTTTAASKAQ

hide sequence

RefSeq Acc Id:

ENSRNOP00000044416 ⟸ ENSRNOT00000047488

RefSeq Acc Id:

ENSRNOP00000072711 ⟸ ENSRNOT00000087096

RefSeq Acc Id:	XP_038946231 ⟸ XM_039090303
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038946232 ⟸ XM_039090304
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038946229 ⟸ XM_039090301
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038946226 ⟸ XM_039090298
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038946230 ⟸ XM_039090302
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038946227 ⟸ XM_039090299
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSRNOP00000094292 ⟸ ENSRNOT00000118670

RefSeq Acc Id:

ENSRNOP00000092131 ⟸ ENSRNOT00000115647

Protein Domains

Homeobox POU-specific

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P31503-F1-model_v2	AlphaFold	P31503	1-632	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698965

Promoter ID:

EPDNEW_R9490

Type:

single initiation site

Name:

Pou2f1_1

Description:

POU class 2 homeobox 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	84,217,337 - 84,217,397	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621689	AgrOrtholog
BioCyc Gene	G2FUF-17555	BioCyc
Ensembl Genes	ENSRNOG00000003581	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000044416	ENTREZGENE
	ENSRNOP00000044416.5	UniProtKB/TrEMBL
	ENSRNOP00000072711	ENTREZGENE
	ENSRNOP00000072711.1	UniProtKB/TrEMBL
	ENSRNOP00000092131	ENTREZGENE
	ENSRNOP00000092131.1	UniProtKB/TrEMBL
	ENSRNOP00000094292.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000047488	ENTREZGENE
	ENSRNOT00000047488.6	UniProtKB/TrEMBL
	ENSRNOT00000087096	ENTREZGENE
	ENSRNOT00000087096.2	UniProtKB/TrEMBL
	ENSRNOT00000115647	ENTREZGENE
	ENSRNOT00000115647.1	UniProtKB/TrEMBL
	ENSRNOT00000118670.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.260.40	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Homeobox-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Homeobox_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Lambda_DNA-bd_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU2F1_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TF_octamer	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:171068	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	171068	ENTREZGENE
PANTHER	POU DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU DOMAIN, CLASS 2, TRANSCRIPTION FACTOR 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Homeodomain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Pou	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU2F1_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Pou2f1	PhenoGen
PRINTS	OCTAMER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POUDOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU_3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	HOX	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	POU	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF46689	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF47413	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2K3N5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AEY3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AHE9_RAT	UniProtKB/TrEMBL
	F1LRD7	ENTREZGENE, UniProtKB/TrEMBL
	P31503	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	Q62719	UniProtKB/Swiss-Prot
	Q63387	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Pou2f1	POU domain, class 2, transcription factor 1			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Pou2f1	POU domain, class 2, transcription factor 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

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Imported Disease Annotations - ClinVar

RGD Manual Annotations

Imported Annotations - PID (archival)