Klc1 (kinesin light chain 1) - Rat Genome Database

Name: Klc1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Klc1 (kinesin light chain 1) Rattus norvegicus

Analyze

Symbol:

Klc1

Name:

kinesin light chain 1

RGD ID:

621411

Description:

Enables tubulin binding activity. Involved in intracellular protein transport and protein localization to synapse. Located in several cellular components, including growth cone; neuronal cell body; and vesicle. Part of kinesin complex. Human ortholog(s) of this gene implicated in Alzheimer's disease and relapsing-remitting multiple sclerosis. Orthologous to human KLC1 (kinesin light chain 1); INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

kinesin 2; KLC 1; Kns2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	KLC1 (kinesin light chain 1)	HGNC	EggNOG, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Klc1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Klc1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	KLC1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	KLC1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Klc1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	KLC1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	KLC1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Klc1 (kinesin light chain 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	KLC1 (kinesin light chain 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Klc1 (kinesin light chain 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	klc1a (kinesin light chain 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	klc-1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Klc	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	klc-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	klc1	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	6	130,823,416 - 130,866,729 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	130,823,419 - 130,867,031 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	130,996,715 - 131,030,065 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	131,293,685 - 131,327,036 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	130,653,475 - 130,686,729 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	136,330,383 - 136,373,721 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	136,553,146 - 136,586,393 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	136,559,355 - 136,592,579 (+)	NCBI
Celera	6	128,377,118 - 128,410,538 (+)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alzheimer's disease (ISO)

breast cancer (ISO)

Breast Cancer, Familial (ISO)

Charcot-Marie-Tooth disease axonal type 2O (ISO)

familial melanoma (ISO)

genetic disease (ISO)

Leukoaraiosis (ISO)

ovarian cancer (ISO)

relapsing-remitting multiple sclerosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

4-amino-2,6-dinitrotoluene (EXP)

4-hydroxyphenyl retinamide (ISO)

4-vinylcyclohexene dioxide (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-pinene (ISO)

ammonium chloride (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bisphenol A (EXP,ISO)

Brodifacoum (EXP)

cadmium dichloride (EXP)

calcidiol (EXP)

chlordecone (ISO)

choline (ISO)

cobalt dichloride (ISO)

cyclosporin A (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

flavonoids (EXP)

flutamide (EXP)

folic acid (ISO)

haloperidol (ISO)

ivermectin (ISO)

L-methionine (ISO)

lidocaine (EXP)

methoxychlor (EXP,ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

N,N-diethyl-m-toluamide (EXP)

olanzapine (ISO)

ozone (ISO)

paracetamol (ISO)

perfluorooctanoic acid (EXP)

permethrin (EXP)

pirinixic acid (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

rotenone (EXP)

sodium arsenite (ISO)

Soman (EXP)

temozolomide (ISO)

thapsigargin (ISO)

toluene (EXP)

Triptolide (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axo-dendritic transport (ISO)

cell adhesion (IEA)

intracellular protein transport (IMP)

microtubule-based movement (IBA)

protein localization to synapse (IMP)

stress granule disassembly (ISO)

Cellular Component

axon (IDA,ISO)

ciliary rootlet (ISO)

cytoplasm (IBA,IEA,ISO)

cytoplasmic vesicle (ISO)

cytosol (ISO)

growth cone (IDA)

kinesin complex (IDA,IEA,ISO)

membrane (IDA)

membrane-bounded organelle (ISO)

microtubule (IEA)

neuron projection (ISO)

neuronal cell body (IDA)

vesicle (IDA)

Molecular Function

kinesin binding (IBA)

protein binding (IPI,ISO)

tubulin binding (IDA)

References

References - curated

#	Reference Title	Reference Citation
1.	Cayman ataxia protein caytaxin is transported by kinesin along neurites through binding to kinesin light chains.	Aoyama T, etal., J Cell Sci. 2009 Nov 15;122(Pt 22):4177-85. Epub 2009 Oct 27.
2.	Kidins220/ARMS is transported by a kinesin-1-based mechanism likely to be involved in neuronal differentiation.	Bracale A, etal., Mol Biol Cell. 2007 Jan;18(1):142-52. Epub 2006 Nov 1.
3.	Molecular genetics of kinesin light chains: generation of isoforms by alternative splicing.	Cyr JL, etal., Proc Natl Acad Sci U S A 1991 Nov 15;88(22):10114-8.
4.	Association study of three polymorphisms of kinesin light-chain 1 gene with Alzheimer's disease.	Dhaenens CM, etal., Neurosci Lett. 2004 Sep 30;368(3):290-2.
5.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
6.	JIP3 mediates TrkB axonal anterograde transport and enhances BDNF signaling by directly bridging TrkB with kinesin-1.	Huang SH, etal., J Neurosci. 2011 Jul 20;31(29):10602-14. doi: 10.1523/JNEUROSCI.0436-11.2011.
7.	The early onset dystonia protein torsinA interacts with kinesin light chain 1.	Kamm C, etal., J Biol Chem 2004 May 7;279(19):19882-92. Epub 2004 Feb 17.
8.	Tubulin and CRMP-2 complex is transported via Kinesin-1.	Kimura T, etal., J Neurochem. 2005 Jun;93(6):1371-82.
9.	A direct interaction between cytoplasmic dynein and kinesin I may coordinate motor activity.	Ligon LA, etal., J Biol Chem. 2004 Apr 30;279(18):19201-8. Epub 2004 Feb 24.
10.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
11.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
12.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
14.	Nesprin 4 is an outer nuclear membrane protein that can induce kinesin-mediated cell polarization.	Roux KJ, etal., Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2194-9. doi: 10.1073/pnas.0808602106. Epub 2009 Jan 21.
15.	A genetic variant in cytoskeleton motors amplifies susceptibility to leukoaraiosis in hypertensive smokers: gene-environmental interactions behind vascular white matter demyelinization.	Szolnoki Z, etal., J Mol Neurosci. 2007;33(2):173-9.
16.	A cytoskeleton motor protein genetic variant may exert a protective effect on the occurrence of multiple sclerosis: the janus face of the kinesin light-chain 1 56836CC genetic variant.	Szolnoki Z, etal., Neuromolecular Med. 2007;9(4):335-9. Epub 2007 Oct 13.
17.	Evaluation of the roles of the A185C and C406T kinesin light-chain 1 variants in the development of leukoaraiosis.	Szolnoki Z, etal., Neurosci Lett. 2007 Dec 18;429(2-3):101-4. Epub 2007 Oct 11.
18.	Kinesin light chain 1 gene haplotypes in three conformational diseases.	von Otter M, etal., Neuromolecular Med. 2010 Sep;12(3):229-36. Epub 2009 Nov 13.
19.	Vaccinia virus A36R membrane protein provides a direct link between intracellular enveloped virions and the microtubule motor kinesin.	Ward BM and Moss B, J Virol. 2004 Mar;78(5):2486-93.

Additional References at PubMed

PMID:9624122	PMID:11740561	PMID:12805290	PMID:16018997	PMID:16176937	PMID:16301330	PMID:16760430	PMID:17200414	PMID:17200416	PMID:17202468	PMID:18669640	PMID:18761385
PMID:19377471	PMID:19825938	PMID:19946888	PMID:24478353	PMID:29476059	PMID:30053369

Genomics

Comparative Map Data

Klc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	6	130,823,416 - 130,866,729 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	130,823,419 - 130,867,031 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	130,996,715 - 131,030,065 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	131,293,685 - 131,327,036 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	130,653,475 - 130,686,729 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	136,330,383 - 136,373,721 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	136,553,146 - 136,586,393 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	136,559,355 - 136,592,579 (+)	NCBI
Celera	6	128,377,118 - 128,410,538 (+)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

KLC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	103,629,211 - 103,701,544 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	103,561,896 - 103,714,249 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	104,095,548 - 104,167,881 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	103,165,278 - 103,237,641 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	103,165,330 - 103,247,461	NCBI
Celera	14	84,149,802 - 84,222,132 (+)	NCBI		Celera
Cytogenetic Map	14	q32.33	NCBI
HuRef	14	84,274,406 - 84,346,180 (+)	NCBI		HuRef
CHM1_1	14	104,033,686 - 104,106,029 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	14	97,865,285 - 97,937,591 (+)	NCBI		T2T-CHM13v2.0

Klc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	111,724,869 - 111,774,278 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	111,725,283 - 111,774,278 (+)	Ensembl		GRCm39 Ensembl
GRCm38	12	111,758,435 - 111,807,844 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	111,758,849 - 111,807,844 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	112,997,060 - 113,044,986 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	112,206,764 - 112,255,652 (+)	NCBI		MGSCv36	mm8
Celera	12	112,960,932 - 113,011,375 (+)	NCBI		Celera
Cytogenetic Map	12	F1	NCBI
cM Map	12	61.13	NCBI

Klc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955538	2,470,473 - 2,503,398 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955538	2,462,491 - 2,503,398 (+)	NCBI	ChiLan1.0	ChiLan1.0

KLC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	14	104,005,459 - 104,076,285 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	84,255,959 - 84,326,767 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	104,065,775 - 104,135,818 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	104,065,775 - 104,135,818 (+)	Ensembl	panpan1.1		panPan2

KLC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	71,401,795 - 71,444,056 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	71,400,003 - 71,444,062 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	70,888,715 - 70,957,177 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	71,653,958 - 71,722,818 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	71,653,677 - 71,722,823 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	71,342,666 - 71,411,450 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	71,382,885 - 71,451,876 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	71,781,533 - 71,850,560 (+)	NCBI		UU_Cfam_GSD_1.0

Klc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	2,642,617 - 2,730,593 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936621	1,471,574 - 1,547,385 (-)	Ensembl	SpeTri2.0
SpeTri2.0 Ensembl	NW_004936621	1,543,444 - 1,560,076 (-)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936621	1,471,574 - 1,505,119 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KLC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa10.2	7	130,838,245 - 130,891,094 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KLC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	81,617,049 - 81,632,845 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666053	68,875,072 - 68,946,403 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Klc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	1,219,270 - 1,266,754 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	1,221,531 - 1,275,002 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Klc1
283 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	110
Count of miRNA genes:	92
Interacting mature miRNAs:	98
Transcripts:	ENSRNOT00000015935, ENSRNOT00000065281
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731173	Uae22	Urinary albumin excretion QTL 22	10.1		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
2290393	Uae37	Urinary albumin excretion QTL 37		0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	65531555	140994061	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	72202632	130919985	Rat
724513	Uae14	Urinary albumin excretion QTL 14	6.5		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	85311061	133478515	Rat
1300076	Glom8	Glomerulus QTL 8	7	0.000000009	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)	6	86894788	131894788	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	88047916	133047916	Rat
61414	Pia3	Pristane induced arthritis QTL 3	4.5		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	6	94968928	137848904	Rat
12801411	Schws8	Schwannoma susceptibility QTL 8			nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	94968928	139968928	Rat
8552796	Vie3	Viral induced encephalitis QTL 3	2.6		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	6	96833997	140994061	Rat
1358355	Srcrt4	Stress Responsive Cort QTL 4	6.39		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	100364669	140994061	Rat
2313399	Anxrr28	Anxiety related response QTL 28			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	6	100671796	132340886	Rat
71111	Iddm8	Insulin dependent diabetes mellitus QTL 8	1.9	0.002	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	6	105156861	140994061	Rat
4145118	Mcs26	Mammary carcinoma susceptibility QTL 26		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	6	106752656	132339866	Rat
737976	Pia24	Pristane induced arthritis QTL 24			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	6	112636280	140994061	Rat
1641917	Colcr5	Colorectal carcinoma resistance QTL 5	3.18	0.0009	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	6	122549046	137801795	Rat
2293085	Iddm29	Insulin dependent diabetes mellitus QTL 29	7.66		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	122549046	140286318	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	122549046	140994061	Rat
2312560	Pur20	Proteinuria QTL 20	2.1	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	125628133	137801795	Rat

Markers in Region

BG378708

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,825,120 - 130,825,244 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,332,102 - 136,332,225	NCBI	Rnor6.0
Rnor_5.0	6	145,340,079 - 145,340,202	UniSTS	Rnor5.0
RGSC_v3.4	6	136,554,823 - 136,554,946	UniSTS	RGSC3.4
Celera	6	128,378,795 - 128,378,918	UniSTS
RH 3.4 Map	6	780.31	UniSTS
Cytogenetic Map	6	q32	UniSTS

AI874768

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,866,521 - 130,866,648 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,373,501 - 136,373,627	NCBI	Rnor6.0
Rnor_5.0	6	145,381,478 - 145,381,604	UniSTS	Rnor5.0
RGSC_v3.4	6	136,596,222 - 136,596,348	UniSTS	RGSC3.4
Celera	6	128,420,367 - 128,420,493	UniSTS
Cytogenetic Map	6	q32	UniSTS

RH129416

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,866,514 - 130,866,734 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,373,494 - 136,373,713	NCBI	Rnor6.0
Rnor_5.0	6	145,381,471 - 145,381,690	UniSTS	Rnor5.0
RGSC_v3.4	6	136,596,215 - 136,596,434	UniSTS	RGSC3.4
Celera	6	128,420,360 - 128,420,579	UniSTS
RH 3.4 Map	6	781.0	UniSTS
Cytogenetic Map	6	q32	UniSTS

BE101314

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,865,769 - 130,865,925 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,372,749 - 136,372,904	NCBI	Rnor6.0
Rnor_5.0	6	145,380,726 - 145,380,881	UniSTS	Rnor5.0
RGSC_v3.4	6	136,595,470 - 136,595,625	UniSTS	RGSC3.4
Celera	6	128,419,615 - 128,419,770	UniSTS
RH 3.4 Map	6	781.1	UniSTS
Cytogenetic Map	6	q32	UniSTS

BI290565

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,824,380 - 130,824,618 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,331,362 - 136,331,599	NCBI	Rnor6.0
Rnor_5.0	6	145,339,339 - 145,339,576	UniSTS	Rnor5.0
RGSC_v3.4	6	136,554,083 - 136,554,320	UniSTS	RGSC3.4
Celera	6	128,378,055 - 128,378,292	UniSTS
RH 3.4 Map	6	781.0	UniSTS
Cytogenetic Map	6	q32	UniSTS

BE097635

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,849,557 - 130,849,711 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,356,536 - 136,356,689	NCBI	Rnor6.0
Rnor_5.0	6	145,364,513 - 145,364,666	UniSTS	Rnor5.0
RGSC_v3.4	6	136,579,257 - 136,579,410	UniSTS	RGSC3.4
Celera	6	128,403,488 - 128,403,641	UniSTS
RH 3.4 Map	6	780.6	UniSTS
Cytogenetic Map	6	q32	UniSTS

RH137087

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	6	130,863,494 - 130,863,708 (+)	MAPPER	mRatBN7.2
Rnor_6.0	6	136,370,475 - 136,370,687	NCBI	Rnor6.0
Rnor_5.0	6	145,378,452 - 145,378,664	UniSTS	Rnor5.0
RGSC_v3.4	6	136,593,196 - 136,593,408	UniSTS	RGSC3.4
Celera	6	128,417,341 - 128,417,553	UniSTS
RH 3.4 Map	6	781.01	UniSTS
Cytogenetic Map	6	q32	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	43	44	28	19	28	8	11	74	35	35	11	8
Low			13	13		13					6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001081972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001081973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001081974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240622	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240623	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240625	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240627	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240628	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240629	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240630	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111737	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111740	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111741	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005505436	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005505437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005505438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC131885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M75146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M75147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	M75148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000015935 ⟹ ENSRNOP00000015935

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	130,823,419 - 130,867,031 (+)	Ensembl
Rnor_6.0 Ensembl	6	136,330,485 - 136,362,720 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000065281 ⟹ ENSRNOP00000060469

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	130,823,419 - 130,856,708 (+)	Ensembl
Rnor_6.0 Ensembl	6	136,330,448 - 136,363,672 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000092741 ⟹ ENSRNOP00000076017

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	6	136,358,057 - 136,373,721 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000092774 ⟹ ENSRNOP00000075931

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	130,823,441 - 130,856,966 (+)	Ensembl
Rnor_6.0 Ensembl	6	136,330,439 - 136,363,672 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000092911

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	6	136,362,395 - 136,363,672 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000093106 ⟹ ENSRNOP00000076048

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	130,823,419 - 130,851,579 (+)	Ensembl
Rnor_6.0 Ensembl	6	136,330,383 - 136,363,234 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000118156 ⟹ ENSRNOP00000079658

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	130,823,419 - 130,866,736 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000119218 ⟹ ENSRNOP00000081868

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	6	130,823,419 - 130,867,031 (+)	Ensembl

RefSeq Acc Id:

NM_001081972 ⟹ NP_001075441

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,467 - 130,856,692 (+)	NCBI
Rnor_6.0	6	136,330,448 - 136,363,672 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI
RGSC_v3.4	6	136,553,146 - 136,586,393 (+)	RGD
Celera	6	128,377,141 - 128,410,538 (+)	NCBI

Sequence:

show sequence

TGAGGATGCTGCGGGGCGGCTGCGGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGG
CCTCGGCCCGTGACAGCGCGACGAGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTC
CACAATGGTGTACATGAAGGAAGAGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAG
ACCAAGCAGGTGATCCAGGGGCTGGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTC
TGCTGGAGACGCTGAAGTGCTTGAAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAG
CATGATCCGCAAGTCCTTGGAGATGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCC
CTGTCTAATCACCTGAATGCCGTGGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTC
TGTGCCAGGAGAACCAGTGGCTGCGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAG
CAAGCAGTCCGTGGCTCAGCTGGAGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAG
AAATACGACGACGACATCTCTCCCTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGG
ATGACCTCTTCCCGAATGATGAGGATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGC
TGCGGCCGCCGCCCAGCAGGGCGGCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTG
GTGATCCAGTATGCCTCGCAGGGGCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGG
AGGACCTGGAGAAGACTTCCGGCCACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGC
CCTGGTGTACAGGGATCAGAACAAGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCT
ATCCGTGAGAAAACCCTGGGCCGAGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAG
TGCTGTACGGTAAGCGTGGCAAGTACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGAT
CAGGGAGAAGGTTCTGGGAAAGGATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTG
CTGTGCCAGAACCAGGGCAAGTACGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCT
ACCAGACGAAGCTCGGACCCGATGATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTG
TTATCTGAAACAAGGGAAGTTCAAACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCA
CATGAACGGGAGTTTGGATCTGTGGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGA
GAGAGGAGTGCAAAGGAAAGCAGAAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAA
GGCCTGCAAAGTGGACAGTCCCACCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGC
CGCCAGGGGAAGTTTGAAGCTGCGGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGG
GTCTTGACAATGTTCACAAACAGAGAGTGGCTGAAGTGCTAAATGACCCTGAGAACGTGGAGAA
GCGGAGGAGCCGGGAGAGCCTCAATGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGG
GAGGAAGCCTAGCCACCCGGTGCCTCCCCTCTGCTCCTGCATGACGGGCAGCGCCTCCTCCGGC
CCCTCCAGTGCTGTCCGCTGTCTAGCAGCCCTAGGAGCTTGTCAGCCGCACCTCTGGGACTGGC
CCCTCCTTTCGGTGCTGTCGTCCTATGGGGTCTTGATTTCTGGATACATGTAGCTTTGCCAGAT
ATGTACTTAGAAATATCAACCGTGTTAATAAGCCCATTAATGTGTAACACACAAGTTTAACAGT
TAAGAGAGAGTAGCTGTTCATCTTGAGGACAGGCGTTAGTGTCACACAGGTTTATTACAGTGGC
ATGATAGTGACCTGTGCAGTCACTGAGCTGTAGGAGTGAGGCATGTGCTGCACGTCCCTGTCGT
ACTTAGAGACCTGGCAGTGCCCTGCTCCGGGCCTCCCCAGGACACACTGACGTAGATTTGCTGT
GTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTAATCTGAAGTGCTCCGTGATGTG
TGTATGTGTCTTTCTAACTTCTAATAAACTCACTCCAGCTGAAAAAAAAAAAAAAAAAAAAAAA
AAAA

hide sequence

RefSeq Acc Id:

NM_001081973 ⟹ NP_001075442

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,444 - 130,856,254 (+)	NCBI
Rnor_6.0	6	136,330,425 - 136,363,234 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI
RGSC_v3.4	6	136,553,146 - 136,586,393 (+)	RGD
Celera	6	128,377,118 - 128,410,100 (+)	NCBI

Sequence:

show sequence

AGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGCGGAGGCGTCGCTTGCTGC
TGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACGAGCGCGGCGCTTCCGATC
GGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAGAGAAGCTGGAGAAGCTTA
CGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCTGGAGGCCCTGAAGAATGA
GCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTGAAGAAGGACGATGAGAGC
AACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGATGCTGGAGCTCGGCCTGA
GCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGTGGAGTCCGAGAAGCAGAA
GCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTGCGGGATGAACTGGCCAAC
ACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGGAGGAGGAGAAGAAGCACC
TGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCCCTCGGAAGACAAAGACTC
TGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAGGATGACCCAGGACAAGGA
ATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCGGCTACGAGATCCCTGCCC
GGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGGGCGTTACGAGGTGGCGGT
GCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGCCACGACCACCCTGATGTG
GCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACAAGTATAAAGACGCAGCAA
ACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCGAGATCACCCTGCGGTGGC
TGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAGTACAAAGAGGCCGAGCCG
CTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGGATCACCCTGATGTTGCTA
AGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTACGAGGAGGTGGAGTATTA
CTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGATGATCCCAACGTGGCCAAG
ACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCAAACAAGCAGAAACATTGT
ACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGTGGATGATGAAAACAAGCC
CATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAGAAGGACGGGTCGTCTTTT
GGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCACCGTCACAACCACCTTGA
AAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGCGGAGACACTGGAGGAAGC
TGCCCTGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGCTGAAGTGCTA
AATGACCCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCAATGTGGACGTGGTCAAGT
ACGAGAGTGGCCCTGACGGAGGGGAGGAAATGAGAAAGATGAAGCTCGGGCTGGTTAAATGACT
TGCTCAGCGTCCATGGCCTAGCCACCCGGTGCCTCCCCTCTGCTCCTGCATGACGGGCAGCGCC
TCCTCCGGCCCCTCCAGTGCTGTCCGCTGTCTAGCAGCCCTAGGAGCTTGTCAGCCGCACC

hide sequence

RefSeq Acc Id:

NM_001081974 ⟹ NP_001075443

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,458 - 130,856,692 (+)	NCBI
Rnor_6.0	6	136,330,439 - 136,363,672 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI
RGSC_v3.4	6	136,553,146 - 136,586,393 (+)	RGD
Celera	6	128,377,132 - 128,410,538 (+)	NCBI

Sequence:

show sequence

GGGTCGGGGTGAGGATGCTGCGGGGCGGCTGCGGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGC
TCTGCGCGGCCTCGGCCCGTGACAGCGCGACGAGCGCGGCGCTTCCGATCGGACGAATGCATGA
CAACATGTCCACAATGGTGTACATGAAGGAAGAGAAGCTGGAGAAGCTTACGCAGGATGAAATC
ATTTCTAAGACCAAGCAGGTGATCCAGGGGCTGGAGGCCCTGAAGAATGAGCACAACTCCATCC
TGCAGAGTCTGCTGGAGACGCTGAAGTGCTTGAAGAAGGACGATGAGAGCAACCTGGTGGAGGA
GAAGTCCAGCATGATCCGCAAGTCCTTGGAGATGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTG
ATGATGGCCCTGTCTAATCACCTGAATGCCGTGGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGG
TTCGACGTCTGTGCCAGGAGAACCAGTGGCTGCGGGATGAACTGGCCAACACACAGCAGAAGTT
ACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGGAGGAGGAGAAGAAGCACCTGGAGTTCATGAAC
CAGCTGAAGAAATACGACGACGACATCTCTCCCTCGGAAGACAAAGACTCTGATTCTTCCAAAG
AGCCGTTGGATGACCTCTTCCCGAATGATGAGGATGACCCAGGACAAGGAATCCAGCAGCAACA
CAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCGGCTACGAGATCCCTGCCCGGCTGCGCACGCTC
CACAACCTGGTGATCCAGTATGCCTCGCAGGGGCGTTACGAGGTGGCGGTGCCACTCTGCAAGC
AGGCCCTGGAGGACCTGGAGAAGACTTCCGGCCACGACCACCCTGATGTGGCCACCATGCTCAA
CATCCTGGCCCTGGTGTACAGGGATCAGAACAAGTATAAAGACGCAGCAAACCTCCTGAACGAT
GCCCTGGCTATCCGTGAGAAAACCCTGGGCCGAGATCACCCTGCGGTGGCTGCGACCCTCAACA
ACCTAGCAGTGCTGTACGGTAAGCGTGGCAAGTACAAAGAGGCCGAGCCGCTGTGCAAACGGGC
CCTGGAGATCAGGGAGAAGGTTCTGGGAAAGGATCACCCTGATGTTGCTAAGCAACTAAATAAT
CTGGCCTTGCTGTGCCAGAACCAGGGCAAGTACGAGGAGGTGGAGTATTACTACCAGAGGGCCC
TGGAGATCTACCAGACGAAGCTCGGACCCGATGATCCCAACGTGGCCAAGACGAAGAATAACCT
GGCTTCCTGTTATCTGAAACAAGGGAAGTTCAAACAAGCAGAAACATTGTACAAGGAGATTCTC
ACCCGCGCACATGAACGGGAGTTTGGATCTGTGGATGATGAAAACAAGCCCATATGGATGCACG
CGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAGAAGGACGGGTCGTCTTTTGGAGAGTATGGCGG
CTGGTATAAGGCCTGCAAAGTGGACAGTCCCACCGTCACAACCACCTTGAAAAACCTGGGAGCA
CTTTACCGCCGCCAGGGGAAGTTTGAAGCTGCGGAGACACTGGAGGAAGCTGCCCTGAGGTCAC
GTAAGCAGGGTCTTGACAATGTTCACAAACAGAGAGTGGCTGAAGTGCTAAATGACCCTGAGAA
CGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCAATGTGGACGTGGTCAAGTACGAGAGTGGCCCT
GACGGAGGGGAGGAAGTGAGTATGAGCGTAGAGTGGAATGGGATGAGAAAGATGAAGCTCGGGC
TGGTTAAATGACTTGCTCAGCGTCCATGGCCTAGCCACCCGGTGCCTCCCCTCTGCTCCTGCAT
GACGGGCAGCGCCTCCTCCGGCCCCTCCAGTGCTGTCCGCTGTCTAGCAGCCCTAGGAGCTTGT
CAGCCGCACCTCTGGGACTGGCCCCTCCTTTCGGTGCTGTCGTCCTATGGGGTCTTGATTTCTG
GATACATGTAGCTTTGCCAGATATGTACTTAGAAATATCAACCGTGTTAATAAGCCCATTAATG
TGTAACACACAAGTTTAACAGTTAAGAGAGAGTAGCTGTTCATCTTGAGGACAGGCGTTAGTGT
CACACAGGTTTATTACAGTGGCATGATAGTGACCTGTGCAGTCACTGAGCTGTAGGAGTGAGGC
ATGTGCTGCACGTCCCTGTCGTACTTAGAGACCTGGCAGTGCCCTGCTCCGGGCCTCCCCAGGA
CACACTGACGTAGATTTGCTGTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCTCTACTA
ATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCACTCCAGCTGA
AAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006240621 ⟹ XP_006240683

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAG
AGAGTGGCTGAAGTGCTAAATGACCCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCA
ATGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGTGAGTATGAGCGTAGA
GTGGAATGGGGATGGCACTGGATCTTTAAAGCGCAGTGGCTCCTTTAGCAAACTCCGGGCTTCC
ATTAGACGCAGCAGTGAGAAGCTGGTTAGGAAGCTGAAGGGAGGAAGCTCCCGGGACAGTGAGC
CGAGGAACCCTGGGGCACCCGCAGAGCCTCTTTGTGTGGAAAACGACAGCAGCAGCCTAGAAGA
CGCTAGTACCAACTGATCTGGGCCTCGTCTGCTTTAAACACCATGATGCTGCTGCTGACACTGG
CTCCAGAGCTGGCCCTGTGAAGGCCAGGGTGGGGCTGGGAGGGCCCTCAGCTGGGAGCCTGCAG
TGCTAACTTAGTTCCCGTGCCCCCAAGCTGTGGGCATATACTAACAACTGCACCACTAGTAGGG
TCTTGGAGAGCAACTCTCAGTGAGGCTGGTGACCTGGCCCTGGCCCCTTCCTGGGAGGCCCACG
GACAGGACACGTCTGACTCCTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTA
GTTCCGTGTCGTGTGTGATAATGTATTTTTATTGTACATTTTTTAAAATTAAAAGTTTATATGC
CGTACCATCTACCGGAA

hide sequence

RefSeq Acc Id:

XM_006240622 ⟹ XP_006240684

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGAGAGTGGCTGAAGTGCTAAATGAC
CCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCAATGTGGACGTGGTCAAGTACGAGA
GTGGCCCTGACGGAGGGGAGGAAGTGAGTATGAGCGTAGAGTGGAATGGGGATGGCACTGGATC
TTTAAAGCGCAGTGGCTCCTTTAGCAAACTCCGGGCTTCCATTAGACGCAGCAGTGAGAAGCTG
GTTAGGAAGCTGAAGGGAGGAAGCTCCCGGGACAGTGAGCCGAGGAACCCTGGGGCACCCGCAG
AGCCTCTTTGTGTGGAAAACGACAGCAGCAGCCTAGAAGACGCTAGTACCAACTGATCTGGGCC
TCGTCTGCTTTAAACACCATGATGCTGCTGCTGACACTGGCTCCAGAGCTGGCCCTGTGAAGGC
CAGGGTGGGGCTGGGAGGGCCCTCAGCTGGGAGCCTGCAGTGCTAACTTAGTTCCCGTGCCCCC
AAGCTGTGGGCATATACTAACAACTGCACCACTAGTAGGGTCTTGGAGAGCAACTCTCAGTGAG
GCTGGTGACCTGGCCCTGGCCCCTTCCTGGGAGGCCCACGGACAGGACACGTCTGACTCCTGCT
GCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCCGTGTCGTGTGTGATAATGT
ATTTTTATTGTACATTTTTTAAAATTAAAAGTTTATATGCCGTACCATCTACCGGAA

hide sequence

RefSeq Acc Id:

XM_006240623 ⟹ XP_006240685

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAG
AGAGTGGCTGAAGTGCTAAATGACCCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCA
ATGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGATGGCACTGGATCTTT
AAAGCGCAGTGGCTCCTTTAGCAAACTCCGGGCTTCCATTAGACGCAGCAGTGAGAAGCTGGTT
AGGAAGCTGAAGGGAGGAAGCTCCCGGGACAGTGAGCCGAGGAACCCTGGGGCACCCGCAGAGC
CTCTTTGTGTGGAAAACGACAGCAGCAGCCTAGAAGACGCTAGTACCAACTGATCTGGGCCTCG
TCTGCTTTAAACACCATGATGCTGCTGCTGACACTGGCTCCAGAGCTGGCCCTGTGAAGGCCAG
GGTGGGGCTGGGAGGGCCCTCAGCTGGGAGCCTGCAGTGCTAACTTAGTTCCCGTGCCCCCAAG
CTGTGGGCATATACTAACAACTGCACCACTAGTAGGGTCTTGGAGAGCAACTCTCAGTGAGGCT
GGTGACCTGGCCCTGGCCCCTTCCTGGGAGGCCCACGGACAGGACACGTCTGACTCCTGCTGCT
TCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCCGTGTCGTGTGTGATAATGTATT
TTTATTGTACATTTTTTAAAATTAAAAGTTTATATGCCGTACCATCTACCGGAA

hide sequence

RefSeq Acc Id:

XM_006240625 ⟹ XP_006240687

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAG
AGAGTGGCTGAAGTGCTAAATGACCCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCA
ATGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGTGAGTATGAGCGTAGA
GTGGAATGGGGGCACCCGCAGAGCCTCTTTGTGTGGAAAACGACAGCAGCAGCCTAGAAGACGC
TAGTACCAACTGATCTGGGCCTCGTCTGCTTTAAACACCATGATGCTGCTGCTGACACTGGCTC
CAGAGCTGGCCCTGTGAAGGCCAGGGTGGGGCTGGGAGGGCCCTCAGCTGGGAGCCTGCAGTGC
TAACTTAGTTCCCGTGCCCCCAAGCTGTGGGCATATACTAACAACTGCACCACTAGTAGGGTCT
TGGAGAGCAACTCTCAGTGAGGCTGGTGACCTGGCCCTGGCCCCTTCCTGGGAGGCCCACGGAC
AGGACACGTCTGACTCCTGCTGCTTCTGCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTT
CCGTGTCGTGTGTGATAATGTATTTTTATTGTACATTTTTTAAAATTAAAAGTTTATATGCCGT
ACCATCTACCGGAA

hide sequence

RefSeq Acc Id:

XM_006240627 ⟹ XP_006240689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,373,716 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAG
AGAGTGGCTGAAGTGCTAAATGACCCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCA
ATGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGGCACCCGCAGAGCCTC
TTTGTGTGGAAAACGACAGCAGCAGCCTAGAAGACGCTAGTACCAACTGATCTGGGCCTCGTCT
GCTTTAAACACCATGATGCTGCTGCTGACACTGGCTCCAGAGCTGGCCCTGTGAAGGCCAGGGT
GGGGCTGGGAGGGCCCTCAGCTGGGAGCCTGCAGTGCTAACTTAGTTCCCGTGCCCCCAAGCTG
TGGGCATATACTAACAACTGCACCACTAGTAGGGTCTTGGAGAGCAACTCTCAGTGAGGCTGGT
GACCTGGCCCTGGCCCCTTCCTGGGAGGCCCACGGACAGGACACGTCTGACTCCTGCTGCTTCT
GCCTGGCCTCTTTGTGGCACTTCTCATGTGTTTAGTTCCGTGTCGTGTGTGATAATGTATTTTT
ATTGTACATTTTTTAAAATTAAAAGTTTATATGCCGTACCATCTACCGGAA

hide sequence

RefSeq Acc Id:

XM_006240628 ⟹ XP_006240690

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,856,692 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,363,672 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGAGAGTGGCTGAAGTGCTAAATGAC
CCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCAATGTGGACGTGGTCAAGTACGAGA
GTGGCCCTGACGGAGGGGAGGAAGTGAGTATGAGCGTAGAGTGGAATGGGATGAGAAAGATGAA
GCTCGGGCTGGTTAAATGACTTGCTCAGCGTCCATGGCCTAGCCGCCCGGTGCCTCCCCTCTGC
TCCTGCATGACGGGCAGCGCCTCCTCCGGCCCCTCCAGTGCTGTCCGCTGTCTAGCAGCCCTAG
GAGCTTGTCAGCCGCACCTCTGGGACTGGCCCCTCCTTTCGGTGCTGCCGTCCTATGGGGTCTT
GATTTCTGGATACATGTAGCTTTGCCAGATATGTACTTAGAAATATCAACCGTGTTAATAAGCC
CATTAATGTGTAACACACAAGTTTAACAGTTAAGAGAGAGTAGCTGTTCATCTTGAGGACAGGC
GTTAGTGTCACACAGGTTTATTACAGTGGCATGATAGTGACCTGTGCAGTCACTGAGCTGTAGG
AGTGAGGCATGTGCTGCACGTCCCTGTCGTACTTAGAGACCTGGCAGTGCCCTGCTCCGGGCCT
CCCCAGGACACACTGACGTAGATTTGCTGTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTT
CACTACTAATCTGAAGTGCTCCGTGATGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCACT
CCAGCTGA

hide sequence

RefSeq Acc Id:

XM_006240629 ⟹ XP_006240691

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,856,692 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,363,672 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGGGTCTTGACAATGTTCACAAACAG
AGAGTGGCTGAAGTGCTAAATGACCCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCA
ATGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAGGGGAGGAAGTGAGTATGAGCGTAGA
GTGGAATGGGGCCTAGCCGCCCGGTGCCTCCCCTCTGCTCCTGCATGACGGGCAGCGCCTCCTC
CGGCCCCTCCAGTGCTGTCCGCTGTCTAGCAGCCCTAGGAGCTTGTCAGCCGCACCTCTGGGAC
TGGCCCCTCCTTTCGGTGCTGCCGTCCTATGGGGTCTTGATTTCTGGATACATGTAGCTTTGCC
AGATATGTACTTAGAAATATCAACCGTGTTAATAAGCCCATTAATGTGTAACACACAAGTTTAA
CAGTTAAGAGAGAGTAGCTGTTCATCTTGAGGACAGGCGTTAGTGTCACACAGGTTTATTACAG
TGGCATGATAGTGACCTGTGCAGTCACTGAGCTGTAGGAGTGAGGCATGTGCTGCACGTCCCTG
TCGTACTTAGAGACCTGGCAGTGCCCTGCTCCGGGCCTCCCCAGGACACACTGACGTAGATTTG
CTGTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCACTACTAATCTGAAGTGCTCCGTGA
TGTGTGTATGTGTCTTTCTAACTTCTAATAAACTCACTCCAGCTGA

hide sequence

RefSeq Acc Id:

XM_006240630 ⟹ XP_006240692

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,856,692 (+)	NCBI
Rnor_6.0	6	136,330,151 - 136,363,672 (+)	NCBI
Rnor_5.0	6	145,338,128 - 145,381,693 (+)	NCBI

Sequence:

show sequence

GAGCTGCGGTCAGGAGCGAGTCGCAGAGGGTGGGCCCTGGCCGCCTGGCATTTTTCCTCTCCTC
CACGGGTGGAGGCGCGACCAGTAAGGCCTCCGGGTCTGAGGGGACCACACCCGGATCAGAGGCT
GGTGAAGAACTCCGGACTGCGGACCCCAGCCTCAGTTTCCCCTGAGCCCCGCCCGGCGGCACGA
GGGCGGGTGACGTCACGGCGCACAGCATTGTGGGGCGGGCGCGGCGCCGGCGACGCCATTTTCG
GCGGCGGAGGGTGGCGCGAGGCTGCGGAGCGCGGGTCGGGGTGAGGATGCTGCGGGGCGGCTGC
GGAGGCGTCGCTTGCTGCTGAGGCGGCTGGGCTCTGCGCGGCCTCGGCCCGTGACAGCGCGACG
AGCGCGGCGCTTCCGATCGGACGAATGCATGACAACATGTCCACAATGGTGTACATGAAGGAAG
AGAAGCTGGAGAAGCTTACGCAGGATGAAATCATTTCTAAGACCAAGCAGGTGATCCAGGGGCT
GGAGGCCCTGAAGAATGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACGCTGAAGTGCTTG
AAGAAGGACGATGAGAGCAACCTGGTGGAGGAGAAGTCCAGCATGATCCGCAAGTCCTTGGAGA
TGCTGGAGCTCGGCCTGAGCGAGGCGCAGGTGATGATGGCCCTGTCTAATCACCTGAATGCCGT
GGAGTCCGAGAAGCAGAAGCTCCGAGCTCAGGTTCGACGTCTGTGCCAGGAGAACCAGTGGCTG
CGGGATGAACTGGCCAACACACAGCAGAAGTTACAGAAGAGCGAGCAGTCCGTGGCTCAGCTGG
AGGAGGAGAAGAAGCACCTGGAGTTCATGAACCAGCTGAAGAAATACGACGACGACATCTCTCC
CTCGGAAGACAAAGACTCTGATTCTTCCAAAGAGCCGTTGGATGACCTCTTCCCGAATGATGAG
GATGACCCAGGACAAGGAATCCAGCAGCAACACAGCAGTGCTGCGGCCGCCGCCCAGCAGGGCG
GCTACGAGATCCCTGCCCGGCTGCGCACGCTCCACAACCTGGTGATCCAGTATGCCTCGCAGGG
GCGTTACGAGGTGGCGGTGCCACTCTGCAAGCAGGCCCTGGAGGACCTGGAGAAGACTTCCGGC
CACGACCACCCTGATGTGGCCACCATGCTCAACATCCTGGCCCTGGTGTACAGGGATCAGAACA
AGTATAAAGACGCAGCAAACCTCCTGAACGATGCCCTGGCTATCCGTGAGAAAACCCTGGGCCG
AGATCACCCTGCGGTGGCTGCGACCCTCAACAACCTAGCAGTGCTGTACGGTAAGCGTGGCAAG
TACAAAGAGGCCGAGCCGCTGTGCAAACGGGCCCTGGAGATCAGGGAGAAGGTTCTGGGAAAGG
ATCACCCTGATGTTGCTAAGCAACTAAATAATCTGGCCTTGCTGTGCCAGAACCAGGGCAAGTA
CGAGGAGGTGGAGTATTACTACCAGAGGGCCCTGGAGATCTACCAGACGAAGCTCGGACCCGAT
GATCCCAACGTGGCCAAGACGAAGAATAACCTGGCTTCCTGTTATCTGAAACAAGGGAAGTTCA
AACAAGCAGAAACATTGTACAAGGAGATTCTCACCCGCGCACATGAACGGGAGTTTGGATCTGT
GGATGATGAAAACAAGCCCATATGGATGCACGCGGAGGAGAGAGAGGAGTGCAAAGGAAAGCAG
AAGGACGGGTCGTCTTTTGGAGAGTATGGCGGCTGGTATAAGGCCTGCAAAGTGGACAGTCCCA
CCGTCACAACCACCTTGAAAAACCTGGGAGCACTTTACCGCCGCCAGGGGAAGTTTGAAGCTGC
GGAGACACTGGAGGAAGCTGCCCTGAGGTCACGTAAGCAGAGAGTGGCTGAAGTGCTAAATGAC
CCTGAGAACGTGGAGAAGCGGAGGAGCCGGGAGAGCCTCAATGTGGACGTGGTCAAGTACGAGA
GTGGCCCTGACGGAGGGGAGGAAATGAGAAAGATGAAGCTCGGGCTGGTTAAATGACTTGCTCA
GCGTCCATGGCCTAGCCGCCCGGTGCCTCCCCTCTGCTCCTGCATGACGGGCAGCGCCTCCTCC
GGCCCCTCCAGTGCTGTCCGCTGTCTAGCAGCCCTAGGAGCTTGTCAGCCGCACCTCTGGGACT
GGCCCCTCCTTTCGGTGCTGCCGTCCTATGGGGTCTTGATTTCTGGATACATGTAGCTTTGCCA
GATATGTACTTAGAAATATCAACCGTGTTAATAAGCCCATTAATGTGTAACACACAAGTTTAAC
AGTTAAGAGAGAGTAGCTGTTCATCTTGAGGACAGGCGTTAGTGTCACACAGGTTTATTACAGT
GGCATGATAGTGACCTGTGCAGTCACTGAGCTGTAGGAGTGAGGCATGTGCTGCACGTCCCTGT
CGTACTTAGAGACCTGGCAGTGCCCTGCTCCGGGCCTCCCCAGGACACACTGACGTAGATTTGC
TGTGTAGTCTTGGTGTGGAAATTTGAATTCTGCTTTTCACTACTAATCTGAAGTGCTCCGTGAT
GTGTGTATGTGTCTTTCTAACTTCTAATAAACTCACTCCAGCTGA

hide sequence

RefSeq Acc Id:

XM_039111735 ⟹ XP_038967663

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI

RefSeq Acc Id:

XM_039111736 ⟹ XP_038967664

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,851,873 (+)	NCBI

RefSeq Acc Id:

XM_039111737 ⟹ XP_038967665

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,857,451 (+)	NCBI

RefSeq Acc Id:

XM_039111738 ⟹ XP_038967666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,416 - 130,866,729 (+)	NCBI

RefSeq Acc Id:

XM_039111739 ⟹ XP_038967667

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,857,451 (+)	NCBI

RefSeq Acc Id:

XM_039111740 ⟹ XP_038967668

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI

RefSeq Acc Id:

XM_039111741 ⟹ XP_038967669

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,856,692 (+)	NCBI

RefSeq Acc Id:

XR_005505436

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,856,692 (+)	NCBI

RefSeq Acc Id:

XR_005505437

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI

RefSeq Acc Id:

XR_005505438

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	6	130,823,419 - 130,866,729 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001075441	(Get FASTA)	NCBI Sequence Viewer
	NP_001075442	(Get FASTA)	NCBI Sequence Viewer
	NP_001075443	(Get FASTA)	NCBI Sequence Viewer
	XP_006240683	(Get FASTA)	NCBI Sequence Viewer
	XP_006240684	(Get FASTA)	NCBI Sequence Viewer
	XP_006240685	(Get FASTA)	NCBI Sequence Viewer
	XP_006240687	(Get FASTA)	NCBI Sequence Viewer
	XP_006240689	(Get FASTA)	NCBI Sequence Viewer
	XP_006240690	(Get FASTA)	NCBI Sequence Viewer
	XP_006240691	(Get FASTA)	NCBI Sequence Viewer
	XP_006240692	(Get FASTA)	NCBI Sequence Viewer
	XP_038967663	(Get FASTA)	NCBI Sequence Viewer
	XP_038967664	(Get FASTA)	NCBI Sequence Viewer
	XP_038967665	(Get FASTA)	NCBI Sequence Viewer
	XP_038967666	(Get FASTA)	NCBI Sequence Viewer
	XP_038967667	(Get FASTA)	NCBI Sequence Viewer
	XP_038967668	(Get FASTA)	NCBI Sequence Viewer
	XP_038967669	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL97446	(Get FASTA)	NCBI Sequence Viewer
	EDL97447	(Get FASTA)	NCBI Sequence Viewer
	EDL97448	(Get FASTA)	NCBI Sequence Viewer
	EDL97449	(Get FASTA)	NCBI Sequence Viewer
	EDL97450	(Get FASTA)	NCBI Sequence Viewer
	EDL97451	(Get FASTA)	NCBI Sequence Viewer
	P37285	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001075442 ⟸ NM_001081973
- Peptide Label:	isoform B
- UniProtKB:	P37285 (UniProtKB/Swiss-Prot), A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEMRKMKLGLVK hide sequence

RefSeq Acc Id:	NP_001075443 ⟸ NM_001081974
- Peptide Label:	isoform C
- UniProtKB:	P37285 (UniProtKB/Swiss-Prot), A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEVSMSVEWNGMRKMKLGLVK hide sequence

RefSeq Acc Id:	NP_001075441 ⟸ NM_001081972
- Peptide Label:	isoform A
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSKQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEA hide sequence

RefSeq Acc Id:	XP_006240683 ⟸ XM_006240621
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEVSMSVEWNGDGTGSLKRSGSFSKLRASIRRSSEKL VRKLKGGSSRDSEPRNPGAPAEPLCVENDSSSLEDASTN hide sequence

RefSeq Acc Id:	XP_006240687 ⟸ XM_006240625
- Peptide Label:	isoform X6
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEVSMSVEWNGGTRRASLCGKRQQQPRRR hide sequence

RefSeq Acc Id:	XP_006240685 ⟸ XM_006240623
- Peptide Label:	isoform X3
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEDGTGSLKRSGSFSKLRASIRRSSEKLVRKLKGGSS RDSEPRNPGAPAEPLCVENDSSSLEDASTN hide sequence

RefSeq Acc Id:	XP_006240689 ⟸ XM_006240627
- Peptide Label:	isoform X9
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEGTRRASLCGKRQQQPRRR hide sequence

RefSeq Acc Id:	XP_006240684 ⟸ XM_006240622
- Peptide Label:	isoform X2
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQRVAEVLNDPENVEKRR SRESLNVDVVKYESGPDGGEEVSMSVEWNGDGTGSLKRSGSFSKLRASIRRSSEKLVRKLKGGS SRDSEPRNPGAPAEPLCVENDSSSLEDASTN hide sequence

RefSeq Acc Id:	XP_006240691 ⟸ XM_006240629
- Peptide Label:	isoform X11
- UniProtKB:	A0A8L2QTG3 (UniProtKB/TrEMBL), A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQGLDNVHKQRVAEVLND PENVEKRRSRESLNVDVVKYESGPDGGEEVSMSVEWNGA hide sequence

RefSeq Acc Id:	XP_006240690 ⟸ XM_006240628
- Peptide Label:	isoform X10
- UniProtKB:	A0A140TAB3 (UniProtKB/TrEMBL), A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQRVAEVLNDPENVEKRR SRESLNVDVVKYESGPDGGEEVSMSVEWNGMRKMKLGLVK hide sequence

RefSeq Acc Id:	XP_006240692 ⟸ XM_006240630
- Peptide Label:	isoform X14
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHDNMSTMVYMKEEKLEKLTQDEIISKTKQVIQGLEALKNEHNSILQSLLETLKCLKKDDESNL VEEKSSMIRKSLEMLELGLSEAQVMMALSNHLNAVESEKQKLRAQVRRLCQENQWLRDELANTQ QKLQKSEQSVAQLEEEKKHLEFMNQLKKYDDDISPSEDKDSDSSKEPLDDLFPNDEDDPGQGIQ QQHSSAAAAAQQGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVAT MLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLC KRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTK NNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGSSFGE YGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAALRSRKQRVAEVLNDPENVEKRR SRESLNVDVVKYESGPDGGEEMRKMKLGLVK hide sequence

RefSeq Acc Id:

ENSRNOP00000075931 ⟸ ENSRNOT00000092774

RefSeq Acc Id:

ENSRNOP00000076017 ⟸ ENSRNOT00000092741

RefSeq Acc Id:

ENSRNOP00000060469 ⟸ ENSRNOT00000065281

RefSeq Acc Id:

ENSRNOP00000076048 ⟸ ENSRNOT00000093106

RefSeq Acc Id:

ENSRNOP00000015935 ⟸ ENSRNOT00000015935

RefSeq Acc Id:	XP_038967666 ⟸ XM_039111738
- Peptide Label:	isoform X8
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967663 ⟸ XM_039111735
- Peptide Label:	isoform X4
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967668 ⟸ XM_039111740
- Peptide Label:	isoform X13
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967665 ⟸ XM_039111737
- Peptide Label:	isoform X7
- UniProtKB:	P37285 (UniProtKB/Swiss-Prot), A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967667 ⟸ XM_039111739
- Peptide Label:	isoform X12
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967669 ⟸ XM_039111741
- Peptide Label:	isoform X15
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967664 ⟸ XM_039111736
- Peptide Label:	isoform X5
- UniProtKB:	A0A8L2RC24 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000079658 ⟸ ENSRNOT00000118156

RefSeq Acc Id:

ENSRNOP00000081868 ⟸ ENSRNOT00000119218

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P37285-F1-model_v2	AlphaFold	P37285	1-560	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621411	AgrOrtholog
BioCyc Gene	G2FUF-35827	BioCyc
Ensembl Genes	ENSRNOG00000011572	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000015935	ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOP00000060469	ENTREZGENE
	ENSRNOP00000060469.4	UniProtKB/TrEMBL
	ENSRNOP00000075931	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOP00000076048	ENTREZGENE
	ENSRNOP00000076048.2	UniProtKB/TrEMBL
	ENSRNOP00000079658	ENTREZGENE
	ENSRNOP00000079658.1	UniProtKB/TrEMBL
	ENSRNOP00000081868	ENTREZGENE
	ENSRNOP00000081868.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015935	ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOT00000065281	ENTREZGENE
	ENSRNOT00000065281.5	UniProtKB/TrEMBL
	ENSRNOT00000092774	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSRNOT00000093106	ENTREZGENE
	ENSRNOT00000093106.2	UniProtKB/TrEMBL
	ENSRNOT00000118156	ENTREZGENE
	ENSRNOT00000118156.1	UniProtKB/TrEMBL
	ENSRNOT00000119218	ENTREZGENE
	ENSRNOT00000119218.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Kinesin_light	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Kinesin_light_repeat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:171041	UniProtKB/Swiss-Prot
NCBI Gene	171041	ENTREZGENE
PANTHER	KINESIN LIGHT CHAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	KINESIN LIGHT CHAIN 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	TPR_10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_12	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_7	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Klc1	PhenoGen
PRINTS	KINESINLIGHT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	KINESIN_LIGHT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TPR_REGION	UniProtKB/Swiss-Prot
SMART	TPR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A140TAB3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZN87_RAT	UniProtKB/TrEMBL
	A0A8I5ZU72_RAT	UniProtKB/TrEMBL
	A0A8L2QTG3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2RC24	ENTREZGENE, UniProtKB/TrEMBL
	KLC1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2007-03-09	Klc1	kinesin light chain 1	Kns2	kinesin 2	Symbol and Name updated	1299863	APPROVED
2005-01-20	Kns2	kinesin 2	Klc1	kinesin light chain 1	Symbol and Name updated	1299863	APPROVED
2002-08-07	Klc1	kinesin light chain 1			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	isolated from the rat brain	633083
gene_protein	64 kDa in size	633083
gene_protein	one of two light chain which constitutes a heterotetramer with two heavy and two light chains	633083

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar