Gene: Tnfaip6 (TNF alpha induced protein 6) Rattus norvegicus
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Symbol: Tnfaip6
Name: TNF alpha induced protein 6
Description: ENCODES a protein that exhibits hyaluronic acid binding (inferred); INVOLVED IN ovulation; positive regulation of cell migration; negative regulation of inflammatory response (ortholog); ASSOCIATED WITH Peritoneal Fibrosis; Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular space; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; 2-amino-2-deoxy-D-glucopyranose
AGR Description: Predicted to have hyaluronic acid binding activity; involved in ovulation and positive regulation of cell migration; localizes to the extracellular space; orthologous to human TNFAIP6 (TNF alpha induced protein 6).
Merged Description: Predicted to have hyaluronic acid binding activity; involved in ovulation and positive regulation of cell migration; localizes to the extracellular space; orthologous to human TNFAIP6 (TNF alpha induced protein 6); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 17alpha-ethynylestradiol; 2-amino-2-deoxy-D-glucopyranose.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Tnfip6; tumor necrosis factor alpha induced protein 6; tumor necrosis factor induced protein 6
Orthologs:
Homo sapiens (human) : TNFAIP6 (TNF alpha induced protein 6)  HGNC  Alliance
Mus musculus (house mouse) : Tnfaip6 (tumor necrosis factor alpha induced protein 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Tnfaip6 (TNF alpha induced protein 6)
Pan paniscus (bonobo/pygmy chimpanzee) : TNFAIP6 (TNF alpha induced protein 6)
Canis lupus familiaris (dog) : TNFAIP6 (TNF alpha induced protein 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Tnfaip6 (TNF alpha induced protein 6)
Sus scrofa (pig) : TNFAIP6 (TNF alpha induced protein 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0337,545,238 - 37,564,704 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0342,649,266 - 42,663,190 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera334,646,103 - 34,665,498 (+)NCBICelera
Cytogenetic Map3q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Tnfaip6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621359
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.