Ctbs (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 238,000,800 - 238,015,368 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 235,340,520 - 235,355,091 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 235,340,547 - 235,355,091 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 243,136,262 - 243,150,803 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 241,027,676 - 241,042,213 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 235,893,896 - 235,908,437 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 252,305,874 - 252,320,387 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 252,305,874 - 252,320,387 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 270,832,838 - 270,847,352 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 244,648,365 - 244,662,878 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 244,635,104 - 244,649,618 (+) | NCBI | | | | | Celera | 2 | 227,320,301 - 227,334,815 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q44 | NCBI | | | | |
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CTBS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 84,549,611 - 84,574,440 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 84,549,611 - 84,574,480 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 85,015,294 - 85,040,123 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 84,792,810 - 84,812,686 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 84,732,242 - 84,752,119 | NCBI | | | | | Celera | 1 | 83,262,703 - 83,284,058 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p22.3 | NCBI | | | | | HuRef | 1 | 83,128,864 - 83,150,219 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 85,133,631 - 85,154,990 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 84,389,989 - 84,414,814 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ctbs (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 3 | 146,156,204 - 146,171,604 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 146,155,550 - 146,171,604 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 146,450,449 - 146,465,849 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 146,449,795 - 146,465,849 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 146,113,457 - 146,128,735 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 146,387,879 - 146,403,157 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 152,900,491 - 152,915,801 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | H2 | NCBI | | | | | cM Map | 3 | 71.26 | NCBI | | | | |
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Ctbs (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955423 | 9,327,945 - 9,343,923 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955423 | 9,327,945 - 9,343,923 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CTBS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 142,320,961 - 142,387,422 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 141,475,528 - 141,541,913 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 117,102,555 - 117,169,745 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 85,963,137 - 85,982,907 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 85,962,647 - 85,982,907 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CTBS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 6 | 63,308,013 - 63,342,697 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 63,308,420 - 63,342,266 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 65,955,414 - 65,991,609 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 63,846,787 - 63,882,969 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 63,846,818 - 63,936,830 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 63,375,119 - 63,411,275 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 63,343,877 - 63,380,014 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 63,849,700 - 63,885,875 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ctbs (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 95,242,051 - 95,263,240 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936608 | 1,048,922 - 1,068,761 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936608 | 1,048,696 - 1,064,383 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CTBS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 129,173,444 - 129,207,863 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 129,173,399 - 129,207,868 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 119,601,501 - 119,617,420 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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CTBS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 48,782,711 - 48,827,463 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 48,782,766 - 48,804,591 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 68,964,965 - 68,986,020 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ctbs (Heterocephalus glaber - naked mole-rat) |
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