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Gene: Atp2b1 (ATPase plasma membrane Ca2+ transporting 1) Rattus norvegicus
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Symbol: Atp2b1
Name: ATPase plasma membrane Ca2+ transporting 1
Description: Exhibits PDZ domain binding activity. Involved in several processes, including animal organ development; calcium ion export; and cellular response to lipid. Localizes to several cellular components, including the basolateral plasma membrane; neuronal cell body membrane; and synaptic membrane. Biomarker of hypertension. Orthologous to human ATP2B1 (ATPase plasma membrane Ca2+ transporting 1); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ATPase, Ca++ transporting, plasma membrane 1; plasma membrane calcium ATPase; plasma membrane calcium pump; plasma membrane calcium-transporting ATPase 1; Pmca1; Pmca1a; Pmca1b; Pmca1c
Orthologs:
Homo sapiens (human) : ATP2B1 (ATPase plasma membrane Ca2+ transporting 1)  HGNC  Alliance
Mus musculus (house mouse) : Atp2b1 (ATPase, Ca++ transporting, plasma membrane 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp2b1 (ATPase plasma membrane Ca2+ transporting 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP2B1 (ATPase plasma membrane Ca2+ transporting 1)
Canis lupus familiaris (dog) : ATP2B1 (ATPase plasma membrane Ca2+ transporting 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp2b1 (ATPase plasma membrane Ca2+ transporting 1)
Sus scrofa (pig) : ATP2B1 (ATPase plasma membrane Ca2+ transporting 1)
more info ...
Allele / Splice: Atp2b1em2Mcwi  
Genetic Models: SS-Atp2b1em2Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0741,114,606 - 41,223,138 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl741,114,697 - 41,220,579 (+)Ensembl
Rnor_5.0741,153,926 - 41,262,537 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4736,493,661 - 36,600,280 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1736,513,931 - 36,620,551 (+)NCBI
Celera730,753,051 - 30,859,194 (+)NCBICelera
Cytogenetic Map7q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atp2b1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621303
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.