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Gene: Ssrp1 (structure specific recognition protein 1) Rattus norvegicus
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Symbol: Ssrp1
Name: structure specific recognition protein 1
Description: Predicted to have histone binding activity and nucleosome binding activity. Predicted to be involved in DNA repair and DNA replication. Predicted to localize to the FACT complex and nuclear chromatin. Orthologous to human SSRP1 (structure specific recognition protein 1); PARTICIPATES IN cisplatin drug pathway; histone modification pathway; RNA polymerase I transcription pathway; INTERACTS WITH 2,6-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: facilitates chromatin transcription complex subunit SSRP1; FACT complex subunit SSRP1; MGC94298; recombination signal sequence recognition protein 1; structure-specific recognition protein 1; T160
Orthologs:
Homo sapiens (human) : SSRP1 (structure specific recognition protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ssrp1 (structure specific recognition protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ssrp1 (structure specific recognition protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SSRP1 (structure specific recognition protein 1)
Canis lupus familiaris (dog) : SSRP1 (structure specific recognition protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ssrp1 (structure specific recognition protein 1)
Sus scrofa (pig) : SSRP1 (structure specific recognition protein 1)
Chlorocebus sabaeus (green monkey) : SSRP1 (structure specific recognition protein 1)
Heterocephalus glaber (naked mole-rat) : Ssrp1 (structure specific recognition protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0372,447,516 - 72,457,621 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl372,447,537 - 72,457,649 (+)Ensembl
Rnor_5.0378,958,172 - 78,968,279 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4368,272,947 - 68,282,596 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1368,171,697 - 68,178,968 (+)NCBI
Celera369,475,838 - 69,485,487 (+)NCBICelera
Cytogenetic Map3q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ssrp1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621143
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.