Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Psmb1 (proteasome 20S subunit beta 1) Rattus norvegicus
Analyze
Symbol: Psmb1
Name: proteasome 20S subunit beta 1
Description: Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to the cytoplasm; nucleus; and proteasome core complex, beta-subunit complex. Orthologous to human PSMB1 (proteasome subunit beta 1); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1,3-dinitrobenzene; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: macropain subunit C5; multicatalytic endopeptidase complex subunit C5; proteasome (prosome, macropain) subunit, beta type 1; proteasome beta 1 subunit; proteasome component C5; proteasome gamma chain; proteasome subunit beta 1; proteasome subunit beta type-1; proteasome subunit RC5
Orthologs:
Homo sapiens (human) : PSMB1 (proteasome 20S subunit beta 1)  HGNC  Alliance
Mus musculus (house mouse) : Psmb1 (proteasome (prosome, macropain) subunit, beta type 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Psmb1 (proteasome 20S subunit beta 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PSMB1 (proteasome 20S subunit beta 1)
Canis lupus familiaris (dog) : PSMB1 (proteasome subunit beta 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Psmb1 (proteasome 20S subunit beta 1)
Sus scrofa (pig) : PSMB1 (proteasome 20S subunit beta 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0157,470,878 - 57,491,359 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0158,399,237 - 58,419,917 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4154,369,775 - 54,388,816 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1154,372,719 - 54,391,761 (-)NCBI
Celera152,648,620 - 52,666,985 (-)NCBICelera
Cytogenetic Map1q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Psmb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621092
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-09-24
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.