Psmb1 (proteasome 20S subunit beta 1)

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Gene: Psmb1 (proteasome 20S subunit beta 1) Rattus norvegicus

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Symbol:

Psmb1

Name:

proteasome 20S subunit beta 1

RGD ID:

621092

Description:

Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to cytoplasm; nucleoplasm; and proteasome core complex, beta-subunit complex. Orthologous to human PSMB1 (proteasome 20S subunit beta 1); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1,3-dinitrobenzene; 17alpha-ethynylestradiol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

macropain subunit C5; multicatalytic endopeptidase complex subunit C5; proteasome (prosome, macropain) subunit, beta type 1; proteasome beta 1 subunit; proteasome component C5; proteasome gamma chain; proteasome subunit beta 1; proteasome subunit beta type-1; proteasome subunit RC5

Orthologs:

Homo sapiens (human) : PSMB1 (proteasome 20S subunit beta 1) HGNC Alliance
Mus musculus (house mouse) : Psmb1 (proteasome (prosome, macropain) subunit, beta type 1) MGI Alliance
Chinchilla lanigera (long-tailed chinchilla) : Psmb1 (proteasome 20S subunit beta 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PSMB1 (proteasome 20S subunit beta 1)
Canis lupus familiaris (dog) : PSMB1 (proteasome 20S subunit beta 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Psmb1 (proteasome 20S subunit beta 1)
Sus scrofa (pig) : PSMB1 (proteasome 20S subunit beta 1)
Chlorocebus sabaeus (African green monkey) : PSMB1 (proteasome 20S subunit beta 1)
Heterocephalus glaber (naked mole-rat) : Psmb1 (proteasome 20S subunit beta 1)

more info ...

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PSMB1 (proteasome 20S subunit beta 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Psmb1 (proteasome (prosome, macropain) subunit, beta type 1)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Psmb1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PSMB1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PSMB1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Psmb1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PSMB1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	PSMB1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Psmb1 (proteasome 20S subunit beta 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PSMB1 (proteasome 20S subunit beta 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Mus musculus (house mouse):	Psmb1 (proteasome (prosome, macropain) subunit, beta type 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Danio rerio (zebrafish):	psmb1 (proteasome subunit beta 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Saccharomyces cerevisiae (baker's yeast):	PRE7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Drosophila melanogaster (fruit fly):	Prosbeta6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Caenorhabditis elegans (roundworm):	pbs-6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)

Latest Assembly:

Rnor_6.0 - RGSC Genome Assembly v6.0

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	1	57,470,878 - 57,491,359 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	57,470,632 - 57,489,727 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	58,399,237 - 58,419,917 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	54,369,775 - 54,388,816 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	1	54,372,719 - 54,391,761 (-)	NCBI
Celera	1	52,648,620 - 52,666,985 (-)	NCBI		Celera
Cytogenetic Map	1	q12	NCBI

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Strain Sequence Variants (Rnor 6.0)

Additional Information

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Nomenclature History

More on Psmb1
	Alliance Gene
	NCBI Gene
	Ensembl Gene
	JBrowse: rn5 rn6
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	621092
Created:	2002-08-06
Species:	Rattus norvegicus
Last Modified:	2020-08-20
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - ClinVar

Imported Annotations - CTD

Imported Annotations - KEGG (archival)