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Gene: Chi3l1 (chitinase 3 like 1) Rattus norvegicus
Symbol: Chi3l1
Name: chitinase 3 like 1
Description: Predicted to have chitin binding activity. Involved in cellular response to interleukin-1; cellular response to tumor necrosis factor; and inflammatory response. Localizes to extracellular space. Biomarker of hypertension. Human ortholog(s) of this gene implicated in asthma and schizophrenia. Orthologous to human CHI3L1 (chitinase 3 like 1); PARTICIPATES IN amino sugar metabolic pathway; nucleotide sugar metabolic pathway; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cartilage glycoprotein 39; CGP-39; Chil1; chitinase 3-like 1; chitinase 3-like 1 (cartilage glycoprotein-39); chitinase-3-like protein 1; GP-39; MGC109420
Homo sapiens (human) : CHI3L1 (chitinase 3 like 1)  HGNC  Alliance
Mus musculus (house mouse) : Chil1 (chitinase-like 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chi3l1 (chitinase 3 like 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CHI3L1 (chitinase 3 like 1)
Canis lupus familiaris (dog) : CHI3L1 (chitinase 3 like 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chi3l1 (chitinase 3 like 1)
Sus scrofa (pig) : CHI3L1 (chitinase 3 like 1)
Chlorocebus sabaeus (African green monkey) : CHI3L1 (chitinase 3 like 1)
Heterocephalus glaber (naked mole-rat) : Chi3l1 (chitinase 3 like 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01351,022,844 - 51,030,797 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1351,022,681 - 51,030,802 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01356,074,912 - 56,086,477 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41347,139,658 - 47,147,591 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11347,155,099 - 47,161,151 (+)NCBI
Celera1345,969,872 - 45,977,855 (+)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Chi3l1
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620874
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-07-28
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.