Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Cirbp (cold inducible RNA binding protein) Rattus norvegicus
Analyze
Symbol: Cirbp
Name: cold inducible RNA binding protein
Description: Predicted to have RNA binding activity and translation repressor activity. Involved in response to cold. Predicted to localize to the cytoplasmic stress granule; nucleoplasm; and spliceosomal complex. Orthologous to human CIRBP (cold inducible RNA binding protein); INTERACTS WITH 1,2-dimethylhydrazine; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: A18 hnRNP; cold inducible RNA-binding protein; cold-inducible RNA-binding protein; glycine-rich RNA-binding protein CIRP
Orthologs:
Homo sapiens (human) : CIRBP (cold inducible RNA binding protein)  HGNC  Alliance
Mus musculus (house mouse) : Cirbp (cold inducible RNA binding protein)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cirbp (cold inducible RNA binding protein)
Pan paniscus (bonobo/pygmy chimpanzee) : CIRBP (cold inducible RNA binding protein)
Canis lupus familiaris (dog) : CIRBP (cold inducible RNA binding protein)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cirbp (cold inducible RNA binding protein)
Sus scrofa (pig) : CIRBP (cold inducible RNA binding protein)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0712,400,066 - 12,405,054 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl712,401,207 - 12,405,022 (-)Ensembl
Rnor_5.0712,570,171 - 12,575,155 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4711,047,003 - 11,050,820 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1711,047,003 - 11,050,820 (-)NCBI
Celera77,711,175 - 7,714,992 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cirbp
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620756
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.