Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Batf3 (basic leucine zipper ATF-like transcription factor 3) Rattus norvegicus
Analyze
Symbol: Batf3
Name: basic leucine zipper ATF-like transcription factor 3
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in myeloid dendritic cell differentiation; negative regulation of transcription by RNA polymerase II; and response to virus. Predicted to localize to the nucleus. Orthologous to human BATF3 (basic leucine zipper ATF-like transcription factor 3); INTERACTS WITH 2,4,6-trinitrotoluene; 3,7-dihydropurine-6-thione; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: B-ATF-3; basic leucine zipper transcription factor, ATF-like 3; basic leucine zipper transcriptional factor ATF-like 3; JDP-1; Jdp1; Jun dimerization protein 1; Jun dimerization protein 1 gene
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013109,713,376 - 109,726,438 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13109,713,489 - 109,724,863 (+)Ensembl
Rnor_5.013114,308,705 - 114,320,081 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413107,128,770 - 107,140,194 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.113107,317,873 - 107,329,297 (+)NCBI
Celera13102,155,014 - 102,166,267 (+)NCBICelera
Cytogenetic Map13q27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Batf3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620501
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.