Agps (alkylglycerone phosphate synthase)

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Gene: Agps (alkylglycerone phosphate synthase) Rattus norvegicus

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Symbol:

Agps

Name:

alkylglycerone phosphate synthase

RGD ID:

620364

Description:

Enables alkylglycerone-phosphate synthase activity. Predicted to be involved in ether lipid biosynthetic process. Located in peroxisome. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata and rhizomelic chondrodysplasia punctata type 3. Orthologous to human AGPS (alkylglycerone phosphate synthase); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ether lipid metabolic pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Adap-s; Adps; Ads; alkyl-DHAP synthase; alkyl-dihydroxyacetonephosphate synthase; alkyl-dihydroxyacetonephosphate synthase precursor; alkyldihydroxyacetone phosphate synthase; alkyldihydroxyacetonephosphate synthase, peroxisomal; alkylglycerone phosphate synthase-like; alkylglycerone-phosphate synthase; LOC100360503

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AGPS (alkylglycerone phosphate synthase)	RGD	RGD
Mus musculus (house mouse):	Agps (alkylglycerone phosphate synthase)	RGD	RGD
Chinchilla lanigera (long-tailed chinchilla):	Agps (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AGPS (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AGPS (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Agps (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AGPS (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AGPS (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Agps (alkylglycerone phosphate synthase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	AGPS (alkylglycerone phosphate synthase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Agps (alkylglycerone phosphate synthase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	agps (alkylglycerone phosphate synthase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	ADPS	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	ads-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	agps	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	81,154,599 - 81,253,099 (+)	NCBI		GRCr8
mRatBN7.2	3	60,747,323 - 60,845,831 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	60,747,323 - 60,845,830 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	64,120,994 - 64,219,055 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	72,704,658 - 72,802,714 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	70,471,616 - 70,569,962 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	62,648,352 - 62,749,250 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	62,648,447 - 62,749,153 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	69,193,349 - 69,296,169 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.1	3	58,425,040 - 58,444,100 (+)	NCBI
Celera	3	60,248,210 - 60,345,456 (+)	NCBI		Celera
Cytogenetic Map	3	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Neoplasms (IDA)

Experimental Sarcoma (IDA)

genetic disease (ISO)

rhizomelic chondrodysplasia punctata (ISO)

rhizomelic chondrodysplasia punctata type 3 (ISO,ISS)

split hand-foot malformation 5 (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

17alpha-ethynylestradiol (EXP)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-methylcholine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amphetamine (EXP)

arsenous acid (ISO)

atrazine (ISO)

benzatropine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carnosic acid (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) sulfate (ISO)

Cuprizon (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

dicrotophos (ISO)

diquat (ISO)

ethyl methanesulfonate (ISO)

fipronil (EXP)

flavonoids (EXP)

formaldehyde (ISO)

FR900359 (ISO)

furan (EXP)

haloperidol (ISO)

indometacin (EXP,ISO)

ivermectin (ISO)

ketoconazole (ISO)

methyl methanesulfonate (ISO)

methylmercury chloride (ISO)

nickel atom (ISO)

paracetamol (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium chromate (ISO)

resveratrol (ISO)

Salinomycin (ISO)

sodium arsenite (ISO)

tamibarotene (ISO)

temozolomide (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trimellitic anhydride (ISO)

triphenyl phosphate (ISO)

Triptolide (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ether lipid biosynthetic process (IEA,ISS)

lipid biosynthetic process (IBA,ISO)

Cellular Component

peroxisomal membrane (IEA)

peroxisome (IBA,IDA,IEA,ISO,TAS)

Molecular Function

alkylglycerone-phosphate synthase activity (IBA,IDA,IEA,ISO)

FAD binding (IEA,ISS)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

ether lipid metabolic pathway (IEA)

plasmalogen biosynthetic pathway (ISO)

plasmalogen metabolic pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Alkyl-dihydroxyacetonephosphate synthase. Fate in peroxisome biogenesis disorders and identification of the point mutation underlying a single enzyme deficiency.	de Vet EC, etal., J Biol Chem 1998 Apr 24;273(17):10296-301.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Kinetic studies of alkyl-dihydroxyacetone-phosphate (alkyl-glycerone-phosphate) synthase in peroxisomes of rat liver.	Gunawan J, etal., Biol Chem Hoppe Seyler 1990 Apr;371(4):339-44.
5.	Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease.	Kikuchi M, etal., J Biol Chem. 2004 Jan 2;279(1):421-8. Epub 2003 Oct 15.
6.	Activities of enzymes involved in the metabolism of ether-linked lipids in normal and neoplastic tissues of rat.	Lee TC, etal., Biochim Biophys Acta. 1980 Aug 11;619(2):420-3.
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
9.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
10.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
11.	GOA pipeline	RGD automated data pipeline
12.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
13.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
14.	PPAR gamma activators induce growth arrest and process extension in B12 oligodendrocyte-like cells and terminal differentiation of cultured oligodendrocytes.	Roth AD, etal., J Neurosci Res. 2003 May 15;72(4):425-35.
15.	Dihydroxyacetone phosphate acyltransferase and alkyldihydroxyacetone phosphate synthase activities in rat liver subcellular fractions and human skin fibroblasts.	Singh H, etal., Arch Biochem Biophys. 1989 Feb 1;268(2):676-86.
16.	Ether lipid synthesis: purification and identification of alkyl dihydroxyacetone phosphate synthase from guinea-pig liver.	Zomer AW, etal., Biochim Biophys Acta. 1993 Oct 13;1170(2):189-96. doi: 10.1016/0005-2760(93)90070-p.

Additional References at PubMed

PMID:8889548	PMID:10415121	PMID:11369596	PMID:18614015	PMID:19946888	PMID:20833797	PMID:21525035

Genomics

Comparative Map Data

Agps
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	81,154,599 - 81,253,099 (+)	NCBI		GRCr8
mRatBN7.2	3	60,747,323 - 60,845,831 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	60,747,323 - 60,845,830 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	64,120,994 - 64,219,055 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	72,704,658 - 72,802,714 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	70,471,616 - 70,569,962 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	62,648,352 - 62,749,250 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	62,648,447 - 62,749,153 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	69,193,349 - 69,296,169 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.1	3	58,425,040 - 58,444,100 (+)	NCBI
Celera	3	60,248,210 - 60,345,456 (+)	NCBI		Celera
Cytogenetic Map	3	q23	NCBI

AGPS
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	177,392,773 - 177,543,834 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	177,392,746 - 177,567,024 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	178,257,501 - 178,408,562 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	177,965,731 - 178,112,411 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	178,083,009 - 178,228,512	NCBI
Celera	2	171,860,003 - 172,011,409 (+)	NCBI		Celera
Cytogenetic Map	2	q31.2	NCBI
HuRef	2	170,128,203 - 170,279,631 (+)	NCBI		HuRef
CHM1_1	2	178,262,812 - 178,413,489 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	177,875,047 - 178,026,109 (+)	NCBI		T2T-CHM13v2.0

Agps
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	75,662,477 - 75,761,694 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	75,662,521 - 75,761,694 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	75,832,177 - 75,931,350 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	75,832,177 - 75,931,350 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	75,670,234 - 75,769,407 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	75,633,031 - 75,730,489 (+)	NCBI		MGSCv36	mm8
Celera	2	77,493,849 - 77,593,052 (+)	NCBI		Celera
Cytogenetic Map	2	C3	NCBI
cM Map	2	44.77	NCBI

Agps
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	19,257,501 - 19,381,901 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	19,253,784 - 19,381,883 (-)	NCBI	ChiLan1.0	ChiLan1.0

AGPS
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	80,058,687 - 80,208,144 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	80,073,679 - 80,223,118 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	64,671,136 - 64,823,956 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	182,375,149 - 182,526,192 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	182,375,149 - 182,520,557 (+)	Ensembl	panpan1.1		panPan2

AGPS
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	21,131,616 - 21,264,615 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	21,131,641 - 21,329,467 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	21,149,863 - 21,284,172 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	21,274,757 - 21,409,268 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	21,276,105 - 21,474,081 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	21,345,042 - 21,479,391 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	21,346,803 - 21,481,415 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	21,462,141 - 21,596,527 (+)	NCBI		UU_Cfam_GSD_1.0

Agps
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	138,188,897 - 138,319,862 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936509	6,742,673 - 6,868,401 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936509	6,742,800 - 6,872,045 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGPS
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	83,146,002 - 83,391,984 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	83,146,063 - 83,285,905 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	92,609,561 - 92,727,304 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AGPS
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	62,943,914 - 63,101,644 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	62,946,695 - 63,096,044 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	136,479,515 - 136,640,249 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Agps
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624787	14,513,082 - 14,656,632 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624787	14,517,552 - 14,661,138 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Agps
347 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	82
Count of miRNA genes:	71
Interacting mature miRNAs:	73
Transcripts:	ENSRNOT00000002111
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	53184593	115665732	Rat
2298542	Neuinf11	Neuroinflammation QTL 11	3.9		nervous system integrity trait (VT:0010566)	spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)	3	15005422	76927699	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	38192233	133483320	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	29463235	118376539	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	53184593	115665732	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
9590286	Uminl1	Urine mineral level QTL 1	3.5	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	3	28249687	73249687	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	50437504	115638231	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	43827364	121056321	Rat
731180	Bp152	Blood pressure QTL 152		0.03	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	53781112	91609953	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat
61356	Bp37	Blood pressure QTL 37	3		blood pressure trait (VT:0000183)	systolic blood pressure (CMO:0000004)	3	30684642	75684642	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	10861912	89878372	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
8694196	Abfw2	Abdominal fat weight QTL 2	16.58	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	3	28249687	73249687	Rat
1582249	Bw77	Body weight QTL 77	3.2	0.0025	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	53184593	64655484	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
2290452	Scl56	Serum cholesterol level QTL 56	2.26		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	3	1	91609953	Rat
12879868	Am6	Aortic mass QTL 6		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	31426403	70668733	Rat
11565451	Bw177	Body weight QTL 177		0.002	body mass (VT:0001259)	body weight (CMO:0000012)	3	31426403	70668733	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	14489145	121056321	Rat
11565452	Kidm57	Kidney mass QTL 57		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	31426403	70668733	Rat
12879866	Cm94	Cardiac mass QTL 94		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	31426403	70668733	Rat
12879867	Cm95	Cardiac mass QTL 95		0.047	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	31426403	70668733	Rat
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	43827364	90905114	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	53184692	89878207	Rat
2302055	Pia30	Pristane induced arthritis QTL 30	3.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	3	27936919	72936919	Rat
1331795	Rf30	Renal function QTL 30	3.708		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	3	39454637	89115240	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	78196190	Rat
2303593	Gluco46	Glucose level QTL 46	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	28468571	73468571	Rat
1354590	Despr11	Despair related QTL 11		0.000031	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	3	28468571	73468571	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1331777	Bw24	Body weight QTL 24	3.503		body mass (VT:0001259)	body weight (CMO:0000012)	3	39454637	89115240	Rat
631647	Bp122	Blood pressure QTL 122	6.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	30684642	75684642	Rat
1300169	Bp177	Blood pressure QTL 177	2.96		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	3	33703347	61017857	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
2302276	Bw82	Body weight QTL 82	4.32		body mass (VT:0001259)	body weight (CMO:0000012)	3	39454637	62951183	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	38517803	83517803	Rat
9590136	Scort3	Serum corticosterone level QTL 3	23.37	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	28249687	73249687	Rat
61419	Cia11	Collagen induced arthritis QTL 11	5.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	3	30356773	98535386	Rat
10450804	Scl70	Serum cholesterol level QTL 70	4.7	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	20714090	65714090	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	41874578	104104347	Rat
8552950	Pigfal12	Plasma insulin-like growth factor 1 level QTL 12	7.3		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	28249687	73249687	Rat
631676	Cm8	Cardiac mass QTL 8	7.03	0.0001	aorta mass (VT:0002845)	aorta weight (CMO:0000076)	3	16954708	61954708	Rat
10450794	Scl69	Serum cholesterol level QTL 69	6.3	0.001	blood LDL cholesterol amount (VT:0000181)	blood low density lipoprotein cholesterol level (CMO:0000053)	3	20714090	65714090	Rat
8694386	Bw159	Body weight QTL 159	4.52	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	3	28249687	73249687	Rat
631665	Bw8	Body weight QTL 8	5.5		body mass (VT:0001259)	body weight (CMO:0000012)	3	50437042	119183768	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	33703347	104104347	Rat
2301400	Cm68	Cardiac mass QTL 68		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	31426403	70668733	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	47233430	110362260	Rat

Markers in Region

BF403642

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	60,746,079 - 60,746,284 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	62,647,109 - 62,647,313	NCBI	Rnor6.0
Rnor_5.0	3	69,192,106 - 69,192,310	UniSTS	Rnor5.0
RGSC_v3.4	3	58,527,331 - 58,527,535	UniSTS	RGSC3.4
Celera	3	60,246,966 - 60,247,170	UniSTS
Cytogenetic Map	3	q23	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053350	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF121052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF280054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ238006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF524961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM389725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000002111 ⟹ ENSRNOP00000002111

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	60,747,323 - 60,845,830 (+)	Ensembl
Rnor_6.0 Ensembl	3	62,648,447 - 62,749,153 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000093964 ⟹ ENSRNOP00000095474

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	60,763,713 - 60,845,830 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096806 ⟹ ENSRNOP00000079560

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	60,747,323 - 60,845,830 (+)	Ensembl

RefSeq Acc Id:

NM_053350 ⟹ NP_445802

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	81,154,599 - 81,253,099 (+)	NCBI
mRatBN7.2	3	60,747,323 - 60,845,831 (+)	NCBI
Rnor_6.0	3	62,648,352 - 62,749,250 (+)	NCBI
Rnor_5.0	3	69,193,349 - 69,296,169 (+)	NCBI
Celera	3	60,248,210 - 60,345,456 (+)	NCBI

Sequence:

show sequence

GGGATGCGCTGCAGCGAATGGTCGCGCGGGGCGCCGCTCTGAGTGACCTTTCACCCGCGCCCAG
CGGCCTCGGGCGGCAGCACAAGGCGGAAGCCATGGCGGAGGCGGCGGGAGAGGCGGGCGCGAGC
GAGCGGGACCCAGACGCGGTCCGCGCGCGTCGGCGGCTGCGGGTTCTGTCGGGCCATCTGCTGG
GCCGGCCCCAGGAGGCTCCGAGTACCAATGAGTGCAAAGCGCGGAGAGCCGCGTCGGCGGCCGG
GGCGTCGCCCGCTGCTTCTCCCGCCGCGCCGGAGTCGGGCACCATCCCCAAGAAGCGGCAAGAA
CTTATGAAATGGAATGGATGGGGCTATAATGATTCCAAGTTCTTACTGAATAAGAAGGGCCAGG
TTGAGCTGACTGGGAAAAGGTACCCTCTTAGTGGCTTGGCTTTACCAACTTTGAAAGACTGGAT
CCAAAACACCCTTGGAGTAAATCTGGAGCATAAAACTACCTCTAAACCATCCATAAATCCTAGT
GAAGCACCTCCTTCTATTGTGAATGAAGATTTCCTTCAGGAACTTAAAGAAGCTCATATTTCCT
ACTCACAAGACGCAGATGATCGTGTGTTTAGAGCTCACGGTCATTGTCTTCATGAGATATTTTT
GCTCAGAGAAGGGATGTTTGAGCGGATTCCTGATATAGTTGTATGGCCAACATGTCATGATGAT
GTAGTTAAGATTGTGAATCTAGCGTGCAAATATAACCTTTGTATCATACCAATTGGTGGGGGAA
CGAGTGTATCCTATGGCCTGATGTGCCCTGCAGATGAGACAAGAACAATAATTTCTTTGGATAC
TTCACAAATGAACCGGATTCTCTGGGTTGATGAGAACAATCTGACAGCTCACGTAGAGGCTGGG
ATAACAGGACAAGATTTGGAAAGACAGCTTAAAGAAAGTGGTTATTGTACAGGTCATGAACCGG
ACTCCCTAGAATTCAGCATCGTGGGAGGATGGATATCTACTCGAGCATCAGGCATGAAGAAGAA
TGTCTACGGCAATATTGAGGACCTGGTGGTTCACATGAAAATGGTAACACCTAGAGGTGTAATA
GAGAAAAGCTCCCAAGGCCCTCGGATGTCAACGGGGCCTGATATCCATCACTTCATCATGGGCT
CTGAAGGAACTCTTGGTGTAATAACAGAAGCTACAATAAAAATCAGACCAACTCCTGAATACCA
AAAGTATGGTTCAGTGGCTTTCCCTAATTTTGAACAAGGTGTAGCCTGTTTAAGAGAAATTGCA
AAGCAGAGATGTGCTCCTGCATCTATCCGCCTCATGGACAACCAGCAGTTTCAGTTTGGGCATG
CTCTTAAACCTCAGGTCTCCTCTATTTTTACGTCATTTTTGGATGGATTCAAAAAGTTTTATAT
TACAAAGTTTAAAGGATTTGATCCAAATCAAATAAGCGTAGCCACATTACTGTTCGAGGGAGAC
CGTGAGAAGGTTCTTCAGCATGAAAAACAAGTGTATGACATCGCAGCAAAATTTGGTGGTCTGG
CTGCTGGAGAAGATAACGGGCAGAGGGGTTATTTGCTGACTTATGTCATTGCATACATGCGTGA
TTTGGGTTTGGAATACTATGTAGTAGGAGAATCTTTTGAGACTTCTGCTCCTTGGGACAGGGTT
ATAGATCTGTGTAGAAATGTAAAAGAAAGGATAAGAAGGGAATGCAAAGAAAGGGGAGTTCAGT
TTGCGCCTCTTTCTACGTGCAGGGTGACGCAGACTTACGATGCAGGTGCATGTATCTACTTCTA
TTTTGCCTTTAACTACAGGGGAATTAGTGACCCACTGACTGTGTTTGAACAGACTGAGGCAGCT
GCTAGAGATGAAATCCTTGCCAATGGAGGGAGCCTGTCACATCACCATGGAGTGGGCAAGTTAC
GAAAGCAGTGGCTAAAGGAGAGCATCTCTGATGTCGGCTTTGGGATGCTAAAGTCTGTCAAAGA
CTATGTGGACCCCAGTAACATCTTTGGAAACAGAAACCTTTTATAACTCCATTAATATCATTAT
GGAAAATGTTACCTTTTAAAAAGTCATCAGCTATGGTTATACCAGTAATCGAATATATCATGGG
ACTGTATTTCAGCTAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_445802	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG43235	(Get FASTA)	NCBI Sequence Viewer
	CAB40909	(Get FASTA)	NCBI Sequence Viewer
	EDL79213	(Get FASTA)	NCBI Sequence Viewer
	EDL79214	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000002111.6
	ENSRNOP00000079560.1
	ENSRNOP00000095474.1
GenBank Protein	Q9EQR2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_445802 ⟸ NM_053350

- UniProtKB:

A0A8I5ZN98 (UniProtKB/TrEMBL), A6HMG2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVARGAALSDLSPAPSGLGRQHKAEAMAEAAGEAGASERDPDAVRARRRLRVLSGHLLGRPQEA
PSTNECKARRAASAAGASPAASPAAPESGTIPKKRQELMKWNGWGYNDSKFLLNKKGQVELTGK
RYPLSGLALPTLKDWIQNTLGVNLEHKTTSKPSINPSEAPPSIVNEDFLQELKEAHISYSQDAD
DRVFRAHGHCLHEIFLLREGMFERIPDIVVWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYG
LMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQDLERQLKESGYCTGHEPDSLEFS
IVGGWISTRASGMKKNVYGNIEDLVVHMKMVTPRGVIEKSSQGPRMSTGPDIHHFIMGSEGTLG
VITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQRCAPASIRLMDNQQFQFGHALKPQV
SSIFTSFLDGFKKFYITKFKGFDPNQISVATLLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDN
GQRGYLLTYVIAYMRDLGLEYYVVGESFETSAPWDRVIDLCRNVKERIRRECKERGVQFAPLST
CRVTQTYDAGACIYFYFAFNYRGISDPLTVFEQTEAAARDEILANGGSLSHHHGVGKLRKQWLK
ESISDVGFGMLKSVKDYVDPSNIFGNRNLL

hide sequence

Ensembl Acc Id:

ENSRNOP00000002111 ⟸ ENSRNOT00000002111

Ensembl Acc Id:

ENSRNOP00000095474 ⟸ ENSRNOT00000093964

Ensembl Acc Id:

ENSRNOP00000079560 ⟸ ENSRNOT00000096806

Protein Domains

FAD-binding PCMH-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9EQR2-F1-model_v2	AlphaFold	Q9EQR2	1-644	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692154

Promoter ID:

EPDNEW_R2679

Type:

initiation region

Name:

Agps_1

Description:

alkylglycerone phosphate synthase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	62,648,430 - 62,648,490	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620364	AgrOrtholog
BioCyc Gene	G2FUF-49298	BioCyc
BioCyc Pathway	PWY-7782 [plasmalogen biosynthesis]	BioCyc
BioCyc Pathway Image	PWY-7782	BioCyc
Ensembl Genes	ENSRNOG00000001547	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000002111.6	UniProtKB/TrEMBL
	ENSRNOT00000093964.1	UniProtKB/TrEMBL
	ENSRNOT00000096806.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.160.650	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.300.330	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.43.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.465.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	3.30.70.3450	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Alkyl-DHAP_Synthase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD-bd_PCMH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD-bd_PCMH-like_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD-bd_PCMH_sub1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD-bd_PCMH_sub2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD-linked_Oxase-like_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD-linked_oxidase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Oxid_FAD_bind_N	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Vanillyl_alc_oxidase_C-sub2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:84114	UniProtKB/Swiss-Prot
NCBI Gene	84114	ENTREZGENE
PANTHER	ALKYLDIHYDROXYACETONEPHOSPHATE SYNTHASE, PEROXISOMAL	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR46568	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	FAD-oxidase_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	FAD_binding_4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Agps	PhenoGen
PROSITE	FAD_PCMH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000001547	RatGTEx
Superfamily-SCOP	SSF55103	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF56176	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5ZN98	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6GLM9_RAT	UniProtKB/TrEMBL
	A6HMG2	ENTREZGENE, UniProtKB/TrEMBL
	A6HMG3_RAT	UniProtKB/TrEMBL
	ADAS_RAT	UniProtKB/Swiss-Prot
	F1M9Q8_RAT	UniProtKB/TrEMBL
	Q9EQR2	ENTREZGENE
	Q9WUW6_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-04-17	Agps	alkylglycerone phosphate synthase	LOC100360503	alkylglycerone phosphate synthase-like	Data merged from RGD:2321954	737654	PROVISIONAL
2010-05-06	LOC100360503	alkylglycerone phosphate synthase-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-01-20	Agps	alkylglycerone phosphate synthase		alkyl-dihydroxyacetonephosphate synthase precursor	Name updated	1299863	APPROVED
2002-08-07	Agps	alkyl-dihydroxyacetonephosphate synthase precursor			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

BioCyc Pathways

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)

BioCyc Pathways