Manea (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 44,992,937 - 45,015,084 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 40,196,373 - 40,218,540 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 40,196,396 - 40,218,459 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 42,298,331 - 42,311,130 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 43,897,348 - 43,910,147 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 43,826,581 - 43,839,380 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 40,845,103 - 40,867,025 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 40,844,998 - 40,867,023 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 45,469,290 - 45,491,210 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 41,577,651 - 41,590,456 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 41,576,728 - 41,590,474 (-) | NCBI | | | | | Celera | 5 | 39,058,787 - 39,071,389 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q21 | NCBI | | | | |
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MANEA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 95,577,535 - 95,609,452 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 95,577,485 - 95,609,470 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 96,025,411 - 96,057,328 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 96,132,134 - 96,164,047 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 96,132,133 - 96,164,047 | NCBI | | | | | Celera | 6 | 96,666,751 - 96,698,498 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q16.1 | NCBI | | | | | HuRef | 6 | 93,458,650 - 93,490,603 (+) | NCBI | | HuRef | | | CHM1_1 | 6 | 96,287,324 - 96,319,327 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 96,748,485 - 96,780,392 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Manea (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 26,324,506 - 26,346,913 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 26,324,506 - 26,346,891 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 26,324,506 - 26,346,918 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 26,324,506 - 26,346,891 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 26,251,653 - 26,273,799 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 26,415,136 - 26,437,282 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 26,032,320 - 26,054,498 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | A3 | NCBI | | | | | cM Map | 4 | 10.92 | NCBI | | | | |
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Manea (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955411 | 21,735,550 - 21,761,750 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955411 | 21,729,085 - 21,763,684 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MANEA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 115,627,414 - 115,666,203 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 113,512,496 - 113,544,251 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 93,428,813 - 93,460,576 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 97,316,022 - 97,347,768 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 97,316,022 - 97,347,768 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MANEA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 54,156,398 - 54,229,183 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 54,170,184 - 54,225,013 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 53,963,772 - 54,036,664 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 54,972,172 - 55,045,434 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 54,982,280 - 55,042,970 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 54,294,305 - 54,367,550 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 54,169,174 - 54,241,745 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 54,371,139 - 54,444,695 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Manea (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 88,721,181 - 88,752,631 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936699 | 1,975,362 - 2,006,932 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936699 | 1,975,391 - 2,006,816 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MANEA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 62,887,881 - 62,945,583 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 62,887,689 - 62,945,586 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 71,027,088 - 71,084,858 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MANEA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 13 | 20,496,677 - 20,529,201 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 13 | 20,496,686 - 20,530,819 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 196,752,522 - 196,783,748 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Manea (Heterocephalus glaber - naked mole-rat) |
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