Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Sh3bp5 (SH3-domain binding protein 5) Rattus norvegicus
Analyze
Symbol: Sh3bp5
Name: SH3-domain binding protein 5
Description: Predicted to have Rab guanyl-nucleotide exchange factor activity and protein kinase inhibitor activity. Predicted to be involved in intracellular signal transduction and negative regulation of protein tyrosine kinase activity. Localizes to the mitochondrion. Orthologous to human SH3BP5 (SH3 domain binding protein 5); INTERACTS WITH (+)-schisandrin B; 1,3,5-trinitro-1,3,5-triazinane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Sab; SH3 domain-binding protein 5; SH3-domain binding protein 5 (BTK-associated); SH3BP-5; vascular endothelial cell-specific protein 18; Vesp18
Orthologs:
Homo sapiens (human) : SH3BP5 (SH3 domain binding protein 5)  HGNC  Alliance
Mus musculus (house mouse) : Sh3bp5 (SH3-domain binding protein 5 (BTK-associated))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sh3bp5 (SH3 domain binding protein 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SH3BP5 (SH3 domain binding protein 5)
Canis lupus familiaris (dog) : SH3BP5 (SH3 domain binding protein 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sh3bp5 (SH3 domain binding protein 5)
Sus scrofa (pig) : SH3BP5 (SH3 domain binding protein 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: suggests misassembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0167,473,367 - 7,559,976 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl167,473,370 - 7,538,201 (-)Ensembl
Rnor_5.0167,408,996 - 7,472,907 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4166,822,512 - 6,888,922 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1166,822,512 - 6,888,920 (-)NCBI
Celera168,541,799 - 8,606,037 (+)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sh3bp5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620220
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.