Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Defb4 (defensin beta 4) Rattus norvegicus
Analyze
Symbol: Defb4
Name: defensin beta 4
Description: Predicted to have CCR6 chemokine receptor binding activity and chemoattractant activity. Predicted to be involved in several processes, including antimicrobial humoral immune response mediated by antimicrobial peptide; cell chemotaxis; and defense response to bacterium. Predicted to localize to the extracellular space. Orthologous to several human genes including DEFB4B (defensin beta 4B); INTERACTS WITH all-trans-retinoic acid; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: BD-2; BD-4; beta defensin-2; beta-defensin 3; beta-defensin 4; Defb2; Defb3; defensin beta 3; defensin, beta 4; RBD-2; RBD-4
Orthologs:
Homo sapiens (human) : DEFB4A (defensin beta 4A)  HGNC  Alliance
Mus musculus (house mouse) : Defb4 (defensin beta 4)  MGI  Alliance
Canis lupus familiaris (dog) : DEFB4A (defensin, beta 4A)
Sus scrofa (pig) : DEFB1 (defensin, beta 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01675,634,598 - 75,637,789 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1675,634,598 - 75,637,789 (-)Ensembl
Rnor_5.01675,234,830 - 75,238,021 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41675,442,005 - 75,445,196NCBIRGSC3.4rn4RGSC3.4
Celera1668,518,128 - 68,521,319 (-)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Defb4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619944
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.