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Gene: Lcn1 (lipocalin 1) Rattus norvegicus
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Symbol: Lcn1
Name: lipocalin 1
RGD ID: 619872
Description: Predicted to have several functions, including chloride ion binding activity; identical protein binding activity; and zinc ion binding activity. Predicted to be involved in sensory perception of taste. Predicted to localize to extracellular space. Orthologous to several human genes including LCN1 (lipocalin 1); INTERACTS WITH 1,2-dimethylhydrazine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Lcn1p1; lipocalin 1 pseudogene 1; VEG protein 1; Vegp1; von Ebner gland protein 1; von Ebners gland protein 1
Orthologs:
Homo sapiens (human) : LCN1 (lipocalin 1)  HGNC  Alliance
Mus musculus (house mouse) : Lcn3 (lipocalin 3)  MGI  Alliance
Pan paniscus (bonobo/pygmy chimpanzee) : LCN1 (lipocalin 1)
Canis lupus familiaris (dog) : OBP2B (odorant binding protein 2B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lcn1 (lipocalin 1)
Sus scrofa (pig) : OBP2B (odorant binding protein 2B)
Chlorocebus sabaeus (African green monkey) : LCN1 (lipocalin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.034,233,111 - 4,236,960 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl34,233,111 - 4,236,960 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.039,591,615 - 9,595,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.434,879,048 - 4,883,523 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.134,879,047 - 4,883,523 (+)NCBI
Celera34,345,110 - 4,349,585 (+)NCBICelera
Cytogenetic Map3p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Lcn1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619872
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.