Gene: A1cf (APOBEC1 complementation factor) Rattus norvegicus
Analyze
Symbol: A1cf
Name: APOBEC1 complementation factor
Description: ENCODES a protein that exhibits mRNA binding; single-stranded RNA binding (ortholog); INVOLVED IN cytidine to uridine editing; embryo implantation (ortholog); mRNA localization resulting in posttranscriptional regulation of gene expression (ortholog); FOUND IN cytoplasm; mRNA editing complex; nuclear heterochromatin; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; acrylamide; aflatoxin B1
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: A1cft; Acf; Apobec-1; apobec-1 complementation factor; Apobec-1 complementation factor APOBEC-1 stimulating protein; Apobec-1 complementation factor, APOBEC-1 stimulating protein; APOBEC1 complementation factorT; APOBEC1-stimulating protein
Orthologs:
Homo sapiens (human) : A1CF (APOBEC1 complementation factor)  HGNC  Alliance
Mus musculus (house mouse) : A1cf (APOBEC1 complementation factor)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : A1cf (APOBEC1 complementation factor)
Pan paniscus (bonobo/pygmy chimpanzee) : A1CF (APOBEC1 complementation factor)
Canis lupus familiaris (dog) : A1CF (APOBEC1 complementation factor)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : A1cf (APOBEC1 complementation factor)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01250,426,027 - 250,514,245 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01257,660,187 - 257,747,893 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41235,865,843 - 235,958,065 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11236,029,865 - 236,122,088 (+)NCBI
Celera1226,856,680 - 226,943,695 (+)NCBICelera
Cytogenetic Map1q52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on A1cf
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 619834
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2018-03-20
Status: ACTIVE