Gene: Ptp4a1 (protein tyrosine phosphatase 4A1) Rattus norvegicus
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Symbol: Ptp4a1
Name: protein tyrosine phosphatase 4A1
Description: ENCODES a protein that exhibits protein tyrosine phosphatase activity; INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN nucleus; cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-nitrofluorene; 3H-1,2-dithiole-3-thione
AGR Description: Exhibits protein tyrosine phosphatase activity; predicted to be involved in positive regulation of cell migration; localizes to the nucleus; orthologous to human PTP4A1 (protein tyrosine phosphatase type IVA, member 1).
Merged Description: Exhibits protein tyrosine phosphatase activity; predicted to be involved in positive regulation of cell migration; localizes to the nucleus; orthologous to human PTP4A1 (protein tyrosine phosphatase type IVA, member 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2-nitrofluorene; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: LOC100360241; MGC93357; PRL-1; protein tyrosine phosphatase 4a1-like; protein tyrosine phosphatase type IVA 1; protein tyrosine phosphatase type IVA, member 1; protein-tyrosine phosphatase 4a1; protein-tyrosine phosphatase of regenerating liver 1
Orthologs:
Homo sapiens (human) : PTP4A1 (protein tyrosine phosphatase 4A1)  HGNC  Alliance
Mus musculus (house mouse) : Ptp4a1 (protein tyrosine phosphatase 4a1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptp4a1 (protein tyrosine phosphatase 4A1)
Pan paniscus (bonobo/pygmy chimpanzee) : PTP4A1 (protein tyrosine phosphatase 4A1)
Canis lupus familiaris (dog) : PTP4A1 (protein tyrosine phosphatase 4A1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptp4a1 (protein tyrosine phosphatase 4A1)
Sus scrofa (pig) : PTP4A1 (protein tyrosine phosphatase 4A1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Note: The loci 103693189 and 29463 are annotated independently on Rnor_6.0 (Annotation Release 105) assembly. [04 Jun 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0937,223,363 - 37,254,222 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0936,028,286 - 36,059,131 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4929,617,636 - 29,625,197 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1929,618,696 - 29,626,440 (-)NCBI
Celera931,034,176 - 31,042,102 (-)NCBICelera
Cytogenetic Map9q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ptp4a1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61970
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.