Crebbp (CREB binding protein) - Rat Genome Database

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Gene: Crebbp (CREB binding protein) Mus musculus
Analyze
Symbol: Crebbp
Name: CREB binding protein
RGD ID: 619553
MGI Page MGI
Description: Enables several functions, including DNA-binding transcription factor binding activity; TFIIB-class transcription factor binding activity; and disordered domain specific binding activity. Involved in several processes, including cellular response to virus; face morphogenesis; and negative regulation of interferon-beta production. Acts upstream of or within cellular response to hepatocyte growth factor stimulus; germ-line stem cell population maintenance; and regulation of gene expression. Located in chromatin and nucleus. Part of RNA polymerase II transcription regulator complex; histone acetyltransferase complex; and outer kinetochore. Is expressed in several structures, including branchial arch; embryo ectoderm; genitourinary system; heart; and skin. Used to study Rubinstein-Taybi syndrome; acute myeloid leukemia; autism spectrum disorder; and myelodysplastic syndrome. Human ortholog(s) of this gene implicated in Rubinstein-Taybi syndrome; acute lymphoblastic leukemia; and acute myeloid leukemia. Orthologous to human CREBBP (CREB binding protein); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; INTERACTS WITH (S)-nicotine; 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AW558298; CB; CBP; CBP/p300; CREB-binding protein; histone lysine acetyltransferase CREBBP; KAT; KAT3A; p300/CBP; protein-lysine acetyltransferase CREBBP
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39163,899,198 - 4,031,864 (-)NCBIGRCm39mm39
GRCm39 Ensembl163,899,192 - 4,031,861 (-)Ensembl
GRCm38164,081,334 - 4,213,957 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,081,328 - 4,213,997 (-)EnsemblGRCm38mm10GRCm38
MGSCv37164,084,048 - 4,213,404 (-)NCBIGRCm37mm9NCBIm37
MGSCv36163,999,276 - 4,128,632 (-)NCBImm8
Celera164,716,365 - 4,845,799 (-)NCBICelera
Cytogenetic Map16A1NCBI
cM Map162.4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acute lymphoblastic leukemia  (ISO)
acute myeloid leukemia  (IEA,ISO)
adenoid cystic carcinoma  (ISO)
adult hepatocellular carcinoma  (ISO)
Agenesis of Corpus Callosum  (ISO)
Alzheimer's disease  (IDA,IEP)
amyotrophic lateral sclerosis type 1  (ISO)
atrial heart septal defect  (ISO)
Au-Kline Syndrome  (ISO)
autism spectrum disorder  (IEA)
bladder urothelial carcinoma  (ISO)
central nervous system disease  (ISO)
Colorectal Neoplasms  (ISO)
Developmental Disabilities  (ISO)
epilepsy  (ISO)
esophagus squamous cell carcinoma  (ISO)
follicular lymphoma  (ISO)
gastric adenocarcinoma  (ISO)
genetic disease  (ISO)
glaucoma  (ISO)
glioblastoma  (ISO)
head and neck squamous cell carcinoma  (ISO)
hepatocellular carcinoma  (ISO)
Hirschsprung Disease 1  (ISO)
Huntington's disease  (IEP,IMP)
intellectual disability  (ISO)
Kohlschutter-Tonz syndrome  (ISO)
lung adenocarcinoma  (ISO)
lung small cell carcinoma  (ISO)
lung squamous cell carcinoma  (ISO)
Marfanoid Mental Retardation Syndrome, Autosomal  (ISO)
medulloblastoma  (ISO)
melanoma  (ISO)
Menke-Hennekam Syndrome 1  (ISO)
multiple myeloma  (ISO)
Muscle Spasticity  (ISO)
myelodysplastic syndrome  (IEA)
Neurodevelopmental Disorders  (ISO)
Prostatic Neoplasms  (ISO)
Rubinstein-Taybi syndrome  (IAGP,IEA,ISO)
Sezary's disease  (ISO)
skin melanoma  (ISO)
spina bifida  (ISO)
squamous cell carcinoma  (ISO)
Thumb Deformity  (ISO)
transitional cell carcinoma  (ISO)
urinary bladder cancer  (ISO)
Uterine Cervical Neoplasms  (ISO)
visual epilepsy  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-anisomycin  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(S)-nicotine  (EXP)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dimethylhydrazine  (EXP)
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2-(2-Chlorophenyl-4'-chlorophenyl)-1,1-dichloroethene  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,6-dinitrotoluene  (ISO)
2-acetamidofluorene  (ISO)
2-Hydroxy-6-(8,11,14-pentadecatrienyl)benzoic acid  (EXP)
2-tert-butylhydroquinone  (ISO)
3',5'-cyclic AMP  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
5-aza-2'-deoxycytidine  (EXP)
acetylsalicylic acid  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
aldosterone  (ISO)
all-trans-retinoic acid  (EXP,ISO)
allethrin  (ISO)
ammonium chloride  (ISO)
Ammothamnine  (EXP)
androst-4-ene-3,17-dione  (ISO)
aripiprazole  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (EXP,ISO)
BAPTA  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
berberine  (ISO)
bezafibrate  (ISO)
bicalutamide  (ISO)
bisphenol A  (EXP,ISO)
bortezomib  (ISO)
bucladesine  (EXP,ISO)
butanal  (ISO)
butyric acid  (EXP)
C60 fullerene  (ISO)
calcitriol  (EXP)
calyculin a  (ISO)
camptothecin  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
chaetocin  (ISO)
chloroprene  (ISO)
choline  (EXP)
chromium atom  (ISO)
chromium(6+)  (ISO)
ciglitazone  (ISO)
cisplatin  (ISO)
clobetasol  (EXP)
clofibrate  (ISO)
cobalt dichloride  (ISO)
cocaine  (ISO)
colforsin daropate hydrochloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
corticosterone  (EXP)
curcumin  (ISO)
cyhalothrin  (ISO)
cypermethrin  (ISO)
cyproterone acetate  (ISO)
DDD  (ISO)
DDE  (ISO)
DDT  (ISO)
deoxynivalenol  (ISO)
diarsenic trioxide  (EXP,ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diethylstilbestrol  (ISO)
dinophysistoxin 1  (ISO)
dioxygen  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
enzalutamide  (ISO)
ethanol  (ISO)
ethylene glycol bis(2-aminoethyl)tetraacetic acid  (ISO)
fenvalerate  (ISO)
folic acid  (EXP)
folpet  (EXP)
formaldehyde  (ISO)
fulvestrant  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (ISO)
ibrutinib  (ISO)
irinotecan  (ISO)
KT 5823  (EXP)
L-methionine  (EXP)
leflunomide  (ISO)
linoleic acid  (ISO)
lipopolysaccharide  (EXP,ISO)
medroxyprogesterone acetate  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
mifepristone  (ISO)
Mitotane  (ISO)
monosodium L-glutamate  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
niclosamide  (ISO)
nicotine  (EXP)
o-anisidine  (ISO)
okadaic acid  (ISO)
oleic acid  (ISO)
oxaliplatin  (ISO)
paracetamol  (EXP)
paraquat  (ISO)
phenobarbital  (EXP,ISO)
phenylephrine  (ISO)
phlorizin  (EXP)
phorbol 13-acetate 12-myristate  (EXP)
pirinixic acid  (ISO)
propanal  (ISO)
propiconazole  (EXP)
quercetin  (EXP,ISO)
raloxifene  (ISO)
resveratrol  (EXP,ISO)
rotenone  (EXP)
SB 203580  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenite  (EXP,ISO)
sodium dodecyl sulfate  (ISO)
sodium fluoride  (EXP)
Soman  (ISO)
streptozocin  (ISO)
succimer  (EXP)
temozolomide  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
topotecan  (ISO)
Tributyltin oxide  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
troglitazone  (EXP,ISO)
urethane  (ISO)
ursodeoxycholic acid  (ISO)
valproic acid  (EXP,ISO)
vincristine  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal behavior  (IAGP)
abnormal blood vessel morphology  (IAGP)
abnormal cell differentiation  (IAGP)
abnormal common myeloid progenitor cell morphology  (IAGP)
abnormal craniofacial morphology  (IAGP)
abnormal definitive hematopoiesis  (IAGP)
abnormal embryonic growth/weight/body size  (IAGP)
abnormal extraembryonic tissue morphology  (IAGP)
abnormal forebrain morphology  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal granulocyte morphology  (IAGP)
abnormal heart development  (IAGP)
abnormal heart morphology  (IAGP)
abnormal joint morphology  (IAGP)
abnormal leukocyte morphology  (IAGP)
abnormal limb morphology  (IAGP)
abnormal long term object recognition memory  (IAGP)
abnormal lung interstitium morphology  (IAGP)
abnormal megakaryocyte morphology  (IAGP)
abnormal mitral valve morphology  (IAGP)
abnormal nervous system morphology  (IAGP)
abnormal nest building behavior  (IAGP)
abnormal neural tube morphology  (IAGP)
abnormal occipital bone morphology  (IAGP)
abnormal pancreatic beta cell morphology  (IAGP)
abnormal pulmonary alveolus morphology  (IAGP)
abnormal rib morphology  (IAGP)
abnormal social investigation  (IAGP)
abnormal spinal cord morphology  (IAGP)
abnormal sternum morphology  (IAGP)
abnormal T cell number  (IAGP)
abnormal tumor incidence  (IAGP)
abnormal tumor necrosis factor level  (IAGP)
abnormal vascular development  (IAGP)
abnormal vascular endothelial cell development  (IAGP)
abnormal vasculogenesis  (IAGP)
abnormal vertebrae morphology  (IAGP)
absent organized vascular network  (IAGP)
absent pre-B cells  (IAGP)
absent vitelline blood vessels  (IAGP)
anemia  (IAGP)
atrial septal defect  (IAGP)
broad nasal bridge  (IAGP)
cleft secondary palate  (IAGP)
decreased aggression towards males  (IAGP)
decreased angiogenesis  (IAGP)
decreased anxiety-related response  (IAGP)
decreased B cell number  (IAGP)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased CD4-positive, alpha beta T cell number  (IAGP)
decreased circulating free fatty acids level  (IAGP)
decreased circulating glucagon level  (IAGP)
decreased common myeloid progenitor cell number  (IAGP)
decreased double-positive T cell number  (IAGP)
decreased embryo size  (IAGP)
decreased fat cell size  (IAGP)
decreased grip strength  (IAGP)
decreased hematopoietic stem cell number  (IAGP)
decreased lymphocyte cell number  (IAGP)
decreased percent body fat/body weight  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased T cell number  (IAGP)
decreased thymocyte number  (IAGP)
decreased triglyceride level  (IAGP)
decreased vascular endothelial cell number  (IAGP)
decreased vertical activity  (IAGP)
decreased white adipose tissue amount  (IAGP)
delayed bone ossification  (IAGP)
embryonic growth arrest  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality during organogenesis  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
embryonic lethality during organogenesis, incomplete penetrance  (IAGP)
embryonic lethality, complete penetrance  (IAGP)
enlarged spleen  (IAGP)
exencephaly  (IAGP)
extramedullary hematopoiesis  (IAGP)
failure of vascular branching  (IAGP)
flattened snout  (IAGP)
hyperactivity  (IAGP)
hypoactivity  (IAGP)
impaired coordination  (IAGP)
impaired glucose tolerance  (IAGP)
impaired hematopoiesis  (IAGP)
improved glucose tolerance  (IAGP)
incomplete rostral neuropore closure  (IAGP)
increased bone marrow cell number  (IAGP)
increased CD8-positive, alpha-beta T cell number  (IAGP)
increased cellular sensitivity to gamma-irradiation  (IAGP)
increased circulating adiponectin level  (IAGP)
increased circulating glucose level  (IAGP)
increased circulating insulin level  (IAGP)
increased circulating leptin level  (IAGP)
increased double-negative T cell number  (IAGP)
increased double-positive T cell number  (IAGP)
increased granulocyte number  (IAGP)
increased grooming behavior  (IAGP)
increased hemolymphoid system tumor incidence  (IAGP)
increased histiocytic sarcoma incidence  (IAGP)
increased insulin sensitivity  (IAGP)
increased leukemia incidence  (IAGP)
increased liver glycogen level  (IAGP)
increased megakaryocyte cell number  (IAGP)
increased oxygen consumption  (IAGP)
increased post-tetanic potentiation  (IAGP)
increased stereotypic behavior  (IAGP)
increased T cell derived lymphoma incidence  (IAGP)
increased vertical activity  (IAGP)
insulin resistance  (IAGP)
intracranial hemorrhage  (IAGP)
large anterior fontanelle  (IAGP)
lethality throughout fetal growth and development, incomplete penetrance  (IAGP)
maxilla hypoplasia  (IAGP)
nasal bone hypoplasia  (IAGP)
no abnormal phenotype detected  (IAGP)
oligodactyly  (IAGP)
open neural tube  (IAGP)
pale yolk sac  (IAGP)
pallor  (IAGP)
perimembraneous ventricular septal defect  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality  (IAGP)
prenatal lethality, complete penetrance  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
preweaning lethality, incomplete penetrance  (IAGP)
scoliosis  (IAGP)
seizures  (IAGP)
short maxilla  (IAGP)
short nasal bone  (IAGP)
short premaxilla  (IAGP)
short snout  (IAGP)
small lung  (IAGP)
small thymus  (IAGP)
split xiphoid process  (IAGP)
supernumerary teeth  (IAGP)
thin myocardium compact layer  (IAGP)
wide frontal bone  (IAGP)
xiphoid process foramen  (IAGP)
References

References - curated
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22. MGD and Homologene mouse data transfer
23. MGD data from the GO Consortium
24. MGD IEA
25. Nucifora FC, etal., Science. 2001 Mar 23;291(5512):2423-8.
26. OMIM Disease Annotation Pipeline
27. Panagopoulos I, etal., Genes Chromosomes Cancer 2003 Jan;36(1):90-8.
28. Peserico A and Simone C, J Biomed Biotechnol. 2011;2011:371832. doi: 10.1155/2011/371832. Epub 2010 Dec 5.
29. Pipeline to import KEGG annotations from KEGG into RGD
30. Pipeline to import Pathway Interaction Database annotations from NCI into RGD
31. RGD automated import pipeline
32. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
33. RGD automated import pipeline for gene-chemical interactions
34. Ross S and Hill CS, Int J Biochem Cell Biol. 2008;40(3):383-408. Epub 2007 Oct 7.
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Additional References at PubMed
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PMID:17525731   PMID:17543037   PMID:17599912   PMID:17656371   PMID:17707229   PMID:17923090   PMID:17936260   PMID:17967808   PMID:18022353   PMID:18241125   PMID:18246306   PMID:18263767  
PMID:18287559   PMID:18295234   PMID:18319327   PMID:18329113   PMID:18330926   PMID:18458062   PMID:18469200   PMID:18485870   PMID:18509338   PMID:18519545   PMID:18544709   PMID:18552833  
PMID:19057620   PMID:19100722   PMID:19220000   PMID:19252086   PMID:19272189   PMID:19357310   PMID:19416967   PMID:19433445   PMID:19450513   PMID:19470462   PMID:19524524   PMID:19598128  
PMID:19651603   PMID:19729597   PMID:19738286   PMID:19786557   PMID:19822209   PMID:19822904   PMID:19922678   PMID:19924292   PMID:20152182   PMID:20211142   PMID:20466049   PMID:20508149  
PMID:20516639   PMID:20534573   PMID:20660310   PMID:20881124   PMID:20930143   PMID:20961098   PMID:20969867   PMID:21072211   PMID:21098220   PMID:21140220   PMID:21164521   PMID:21224411  
PMID:21228185   PMID:21267068   PMID:21289174   PMID:21390126   PMID:21402781   PMID:21451036   PMID:21459086   PMID:21508930   PMID:21549327   PMID:21555743   PMID:21558372   PMID:21751375  
PMID:21766169   PMID:21774670   PMID:21803292   PMID:21847097   PMID:21873635   PMID:21901164   PMID:22006020   PMID:22049069   PMID:22114264   PMID:22116937   PMID:22179676   PMID:22198154  
PMID:22207202   PMID:22292123   PMID:22364282   PMID:22387215   PMID:22431394   PMID:22467641   PMID:22508984   PMID:22523253   PMID:22649236   PMID:22658979   PMID:22770240   PMID:22780989  
PMID:22807441   PMID:22815486   PMID:22884877   PMID:22890843   PMID:22977234   PMID:22982455   PMID:22988430   PMID:23235480   PMID:23273993   PMID:23308088   PMID:23321477   PMID:23373423  
PMID:23441852   PMID:23532979   PMID:23768074   PMID:23783631   PMID:23831576   PMID:23868976   PMID:23922782   PMID:24019758   PMID:24038357   PMID:24089570   PMID:24247009   PMID:24265455  
PMID:24340053   PMID:24491799   PMID:24522976   PMID:24586743   PMID:24639469   PMID:24648406   PMID:24748101   PMID:24753318   PMID:24792116   PMID:24825348   PMID:24853677   PMID:24878634  
PMID:24880616   PMID:24946904   PMID:24952961   PMID:25071087   PMID:25154413   PMID:25314079   PMID:25500291   PMID:25706271   PMID:25885346   PMID:25888034   PMID:25941038   PMID:25961797  
PMID:26113042   PMID:26164627   PMID:26180185   PMID:26258652   PMID:26496610   PMID:26633036   PMID:26708506   PMID:26730956   PMID:26755589   PMID:26870802   PMID:26921097   PMID:26976603  
PMID:27311442   PMID:27427906   PMID:27477692   PMID:27618724   PMID:27667451   PMID:27721240   PMID:27832201   PMID:27881875   PMID:27999180   PMID:28069569   PMID:28086087   PMID:28288979  
PMID:28291835   PMID:28398509   PMID:28611184   PMID:28630323   PMID:28675294   PMID:28752224   PMID:28825697   PMID:28831000   PMID:29145650   PMID:29173896   PMID:29184203   PMID:29217654  
PMID:29551561   PMID:29967375   PMID:30181244   PMID:30334186   PMID:30526058   PMID:30573679   PMID:30850733   PMID:30888860   PMID:30953353   PMID:30971452   PMID:30980515   PMID:31091449  
PMID:31138536   PMID:31286141   PMID:31519498   PMID:31600191   PMID:31806049   PMID:31899788   PMID:32267917   PMID:32325033   PMID:32444594   PMID:32576962   PMID:32690000   PMID:32877653  
PMID:32968282   PMID:33022214   PMID:33121486   PMID:33603756   PMID:33765415  


Genomics

Comparative Map Data
Crebbp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39163,899,198 - 4,031,864 (-)NCBIGRCm39mm39
GRCm39 Ensembl163,899,192 - 4,031,861 (-)Ensembl
GRCm38164,081,334 - 4,213,957 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,081,328 - 4,213,997 (-)EnsemblGRCm38mm10GRCm38
MGSCv37164,084,048 - 4,213,404 (-)NCBIGRCm37mm9NCBIm37
MGSCv36163,999,276 - 4,128,632 (-)NCBImm8
Celera164,716,365 - 4,845,799 (-)NCBICelera
Cytogenetic Map16A1NCBI
cM Map162.4NCBI
CREBBP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl163,725,054 - 3,880,713 (-)EnsemblGRCh38hg38GRCh38
GRCh38163,725,054 - 3,880,727 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37163,775,055 - 3,930,714 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36163,715,056 - 3,870,122 (-)NCBINCBI36hg18NCBI36
Build 34163,716,569 - 3,870,712NCBI
Celera163,981,749 - 4,136,789 (-)NCBI
Cytogenetic Map16p13.3NCBI
HuRef163,743,994 - 3,898,607 (-)NCBIHuRef
CHM1_1163,775,055 - 3,930,225 (-)NCBICHM1_1
Crebbp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21011,335,551 - 11,461,888 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl1011,595,044 - 11,721,039 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01011,590,994 - 11,721,039 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01010,349,914 - 10,475,506 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41011,598,680 - 11,724,122 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11011,598,679 - 11,724,107 (+)NCBI
Celera1010,292,190 - 10,418,453 (+)NCBICelera
Cytogenetic Map10q12NCBI
Crebbp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544213,559,496 - 13,692,004 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544213,559,496 - 13,691,913 (+)NCBIChiLan1.0ChiLan1.0
CREBBP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1163,820,507 - 3,974,200 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl163,820,519 - 3,974,206 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0162,645,445 - 2,800,975 (-)NCBIMhudiblu_PPA_v0panPan3
CREBBP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1637,410,201 - 37,536,688 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl637,409,930 - 37,534,176 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,739,122 - 38,865,694 (+)NCBI
ROS_Cfam_1.0637,623,705 - 37,751,833 (+)NCBI
UMICH_Zoey_3.1637,408,543 - 37,535,100 (+)NCBI
UNSW_CanFamBas_1.0637,301,774 - 37,428,236 (+)NCBI
UU_Cfam_GSD_1.0637,712,371 - 37,838,937 (+)NCBI
LOC101957668
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344106,046,214 - 106,180,473 (-)NCBI
SpeTri2.0NW_004936694552,447 - 663,237 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CREBBP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl338,388,547 - 38,530,230 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1338,388,366 - 38,530,243 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2339,768,553 - 39,798,241 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103231770
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.153,415,548 - 3,570,030 (-)NCBI
ChlSab1.1 Ensembl53,415,412 - 3,540,943 (-)Ensembl
Vero_WHO_p1.0NW_02366606827,238,466 - 27,395,063 (+)NCBI
Crebbp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248241,516,481 - 1,655,364 (-)NCBI

Position Markers
AW558298  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38164,081,696 - 4,081,783UniSTSGRCm38
MGSCv37164,081,696 - 4,081,783UniSTSGRCm37
Celera164,714,013 - 4,714,100UniSTS
Cytogenetic Map16A1UniSTS
Whitehead/MRC_RH1610.87UniSTS
RH137561  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38164,091,795 - 4,091,958UniSTSGRCm38
MGSCv37164,091,795 - 4,091,958UniSTSGRCm37
Celera164,724,113 - 4,724,276UniSTS
Cytogenetic Map16A1UniSTS
Crebbp  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16A1UniSTS
cM Map16 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141060Pbwg19_mpostnatal body weight growth 19 (mouse)Not determined16120963024Mouse
1300632Loca2_mlocomotor activity 2 (mouse)Not determined16122682710Mouse
10043879Adip25_madiposity 25 (mouse)Not determined16122702454Mouse
1301575Tanidd3_mtally ho associated non-insulin dependednt diabetes mellitus 3 (mouse)Not determined16123079875Mouse
1301970Heal11_mwound healing/regeneration 11 (mouse)Not determined16124445989Mouse
4141468Nhdlq10_mnon-HDL QTL 10 (mouse)Not determined16124445989Mouse
1301384Dice1_mdetermination of interleukin 4 commitment 1 (mouse)Not determined16128616494Mouse
10402497Lmr23_mleishmaniasis resistance 23 (mouse)Not determined16129856336Mouse
1301559Bbaa19_mB.burgdorferi-associated arthritis 19 (mouse)Not determined16130249113Mouse
10412289Ppsl_mplasma P-selectin levels (mouse)Not determined16130996708Mouse
27095908Scvln7_msacral vertebrae length 2, 5 week (mouse)16350000040000000Mouse
27226768Tibl9_mtibia length 9, 5 week (mouse)16350000051600000Mouse
27226785Feml12_mfemur length 12, 5 week (mouse)16350000064800000Mouse
1302106Rapop1_mradiation-induced apoptosis 1 (mouse)Not determined16396291515913189Mouse
26884432Zlq7_mzygomatic length QTL 7, 10 week (mouse)16400000064800000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:31
Count of miRNA genes:29
Interacting mature miRNAs:29
Transcripts:ENSMUST00000023165
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001025432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006521754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC132380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY079443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY079444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC072594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU705617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CAAA01026247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S66385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000023165   ⟹   ENSMUSP00000023165
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,081,328 - 4,213,997 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191387
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,086,610 - 4,089,743 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205344   ⟹   ENSMUSP00000146029
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,091,839 - 4,128,621 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205685   ⟹   ENSMUSP00000146076
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,119,033 - 4,126,602 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205765   ⟹   ENSMUSP00000146330
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,083,701 - 4,213,413 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205945
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,087,801 - 4,088,595 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206098   ⟹   ENSMUSP00000145825
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,092,190 - 4,096,126 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206464   ⟹   ENSMUSP00000145798
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl164,088,380 - 4,094,644 (-)Ensembl
RefSeq Acc Id: NM_001025432   ⟹   NP_001020603
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,901,912 - 4,031,268 (-)NCBI
GRCm38164,084,048 - 4,213,404 (-)NCBI
MGSCv37164,084,048 - 4,213,404 (-)RGD
Celera164,716,365 - 4,845,799 (-)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006521751   ⟹   XP_006521814
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,899,198 - 4,031,864 (-)NCBI
GRCm38164,081,334 - 4,213,450 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521752   ⟹   XP_006521815
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,899,198 - 4,031,863 (-)NCBI
GRCm38164,081,334 - 4,213,401 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521753   ⟹   XP_006521816
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,899,198 - 4,031,864 (-)NCBI
GRCm38164,081,334 - 4,213,957 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006521754   ⟹   XP_006521817
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39163,899,198 - 4,031,864 (-)NCBI
GRCm38164,081,334 - 4,213,957 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001020603   ⟸   NM_001025432
- UniProtKB: F8VPR5 (UniProtKB/TrEMBL),   Q6GQV9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521817   ⟸   XM_006521754
- Peptide Label: isoform X4
- UniProtKB: A0A0U1RQB6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006521816   ⟸   XM_006521753
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006521815   ⟸   XM_006521752
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006521814   ⟸   XM_006521751
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000145825   ⟸   ENSMUST00000206098
RefSeq Acc Id: ENSMUSP00000145798   ⟸   ENSMUST00000206464
RefSeq Acc Id: ENSMUSP00000146330   ⟸   ENSMUST00000205765
RefSeq Acc Id: ENSMUSP00000146029   ⟸   ENSMUST00000205344
RefSeq Acc Id: ENSMUSP00000146076   ⟸   ENSMUST00000205685
RefSeq Acc Id: ENSMUSP00000023165   ⟸   ENSMUST00000023165
Protein Domains
Bromo   CBP/p300-type HAT   KIX   TAZ-type   ZZ-type

Promoters
RGD ID:6826937
Promoter ID:MM_KWN:19958
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:UC007XZM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36164,119,956 - 4,120,692 (-)MPROMDB
RGD ID:6826936
Promoter ID:MM_KWN:19959
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4
Transcripts:ENSMUST00000080297,   NM_001025432
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36164,213,106 - 4,214,357 (-)MPROMDB
RGD ID:8685320
Promoter ID:EPDNEW_M20691
Type:multiple initiation site
Name:Crebbp_1
Description:Mus musculus CREB binding protein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38164,213,374 - 4,213,434EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098280 AgrOrtholog
Ensembl Genes ENSMUSG00000022521 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000023165 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000145798 UniProtKB/TrEMBL
  ENSMUSP00000145825 UniProtKB/TrEMBL
  ENSMUSP00000146029 UniProtKB/TrEMBL
  ENSMUSP00000146076 UniProtKB/TrEMBL
  ENSMUSP00000146330 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000023165 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000205344 UniProtKB/TrEMBL
  ENSMUST00000205685 UniProtKB/TrEMBL
  ENSMUST00000205765 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000206098 UniProtKB/TrEMBL
  ENSMUST00000206464 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1630.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.10.246.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.1020.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.920.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.10.110.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.60.90 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Bromodomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Bromodomain-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Bromodomain_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CBP_P300_HAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Histone_AcTrfase_Rtt109/CBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KIX_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KIX_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rcpt_coact UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rcpt_coact_CREBbp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuc_rcpt_coact_CREBbp_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RING_CBP-p300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RING_CBP-p300_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TAZ_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_TAZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_ZZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_ZZ_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12914 UniProtKB/TrEMBL
MGD MGI:1098280 ENTREZGENE
NCBI Gene 12914 ENTREZGENE
Pfam Bromodomain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Creb_binding UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF902 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HAT_KAT11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KIX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF00569 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-TAZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB CREBBP RGD
PhenoGen Crebbp PhenoGen
PRINTS BROMODOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE BROMODOMAIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BROMODOMAIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CBP_P300_HAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KIX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_TAZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_ZZ_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_ZZ_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BROMO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KAT11 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_TAZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_ZZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47040 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47370 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57933 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF69125 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0U1RP23_MOUSE UniProtKB/TrEMBL
  A0A0U1RP46_MOUSE UniProtKB/TrEMBL
  A0A0U1RPL2_MOUSE UniProtKB/TrEMBL
  A0A0U1RPQ3_MOUSE UniProtKB/TrEMBL
  A0A0U1RQB6 ENTREZGENE, UniProtKB/TrEMBL
  CBP_MOUSE UniProtKB/Swiss-Prot
  F8VPR5 ENTREZGENE, UniProtKB/TrEMBL
  P45481 ENTREZGENE
  Q3V351_MOUSE UniProtKB/TrEMBL
  Q6GQV9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary E9QPH4 UniProtKB/Swiss-Prot