Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Psmb5 (proteasome 20S subunit beta 5) Rattus norvegicus
Symbol: Psmb5
Name: proteasome 20S subunit beta 5
RGD ID: 61879
Description: Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process; proteasome-mediated ubiquitin-dependent protein catabolic process; and response to oxidative stress. Predicted to localize to several cellular components, including centrosome; nucleoplasm; and proteasome core complex, beta-subunit complex. Orthologous to human PSMB5 (proteasome 20S subunit beta 5); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1,3-dinitrobenzene; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: macropain epsilon chain; multicatalytic endopeptidase complex epsilon chain; proteasome (prosome, macropain) subunit, beta type 5; proteasome beta 5 subunit; proteasome beta type subunit 5; proteasome chain 6; proteasome epsilon chain; proteasome subunit beta 5; proteasome subunit beta type-5; proteasome subunit X
Homo sapiens (human) : PSMB5 (proteasome 20S subunit beta 5)  HGNC  Alliance
Mus musculus (house mouse) : Psmb5 (proteasome (prosome, macropain) subunit, beta type 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Psmb5 (proteasome 20S subunit beta 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PSMB5 (proteasome 20S subunit beta 5)
Canis lupus familiaris (dog) : PSMB5 (proteasome 20S subunit beta 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Psmb5 (proteasome 20S subunit beta 5)
Sus scrofa (pig) : PSMB5 (proteasome 20S subunit beta 5)
Chlorocebus sabaeus (African green monkey) : PSMB5 (proteasome 20S subunit beta 5)
Heterocephalus glaber (naked mole-rat) : Psmb5 (proteasome 20S subunit beta 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Rat AssemblyChrPosition (strand)SourceGenome Browsers
Rnor_6.01533,259,039 - 33,263,634 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,259,043 - 33,263,659 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01537,143,058 - 37,147,105 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41532,689,859 - 32,694,364 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11532,705,562 - 32,710,051 (-)NCBI
Celera1527,651,286 - 27,655,779 (-)NCBICelera
Cytogenetic Map15p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
More on Psmb5
Alliance Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61879
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.