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Gene: Psma5 (proteasome subunit alpha 5) Rattus norvegicus
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Symbol: Psma5
Name: proteasome subunit alpha 5
Description: Predicted to have endopeptidase activity. Predicted to be involved in proteasomal ubiquitin-independent protein catabolic process and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to the cytosol; nucleus; and proteasome core complex, alpha-subunit complex. Orthologous to human PSMA5 (proteasome subunit alpha 5); PARTICIPATES IN ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1,3-dinitrobenzene; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: macropain zeta chain; multicatalytic endopeptidase complex zeta chain; proteasome (prosome, macropain) subunit, alpha type 5; proteasome alpha 5 subunit; proteasome subunit alpha type-5; proteasome zeta chain
Orthologs:
Homo sapiens (human) : PSMA5 (proteasome subunit alpha 5)  HGNC  Alliance
Mus musculus (house mouse) : Psma5 (proteasome (prosome, macropain) subunit, alpha type 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Psma5 (proteasome subunit alpha 5)
Pan paniscus (bonobo/pygmy chimpanzee) : PSMA5 (proteasome subunit alpha 5)
Canis lupus familiaris (dog) : PSMA5 (proteasome subunit alpha 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Psma5 (proteasome subunit alpha 5)
Sus scrofa (pig) : PSMA5 (proteasome subunit alpha 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02211,050,344 - 211,073,706 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02230,519,722 - 230,543,040 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42203,825,060 - 203,848,378 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12203,787,813 - 203,811,132 (+)NCBI
Celera2188,541,236 - 188,564,598 (+)NCBICelera
Cytogenetic Map2q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Psma5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 61848
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2019-06-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.