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Gene: PCAT1 (prostate cancer associated transcript 1) Homo sapiens
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Symbol: PCAT1
Name: prostate cancer associated transcript 1
Description: This gene produces a long non-coding RNA that promotes cell proliferation and is upregulated in prostate, colorectal, and other cancers. This RNA negatively regulates the BRCA2 tumor suppressor protein and positively regulates Myc oncoprotein. It contains binding sites for microRNAs, and may act as a sponge for microRNAs that regulate cell growth pathways. [provided by RefSeq, Dec 2017]
Type: ncrna
RefSeq Status: REVIEWED
Also known as: PCA1; PCAT-1; PiHL; prostate cancer associated transcript 1 (non-protein coding)
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl8126,556,323 - 127,419,050 (+)Ensembl
GRCh388127,013,154 - 127,021,014 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh378128,025,399 - 128,033,259 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map8q24.21NCBI
HuRef8123,343,086 - 123,350,948 (+)NCBIHuRef
CHM1_18128,065,792 - 128,073,646 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
References - uncurated

Genomics

miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on PCAT1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 5508230
Created: 2011-10-11
Species: Homo sapiens
Last Modified: 2020-02-11
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.