Gm14824 (predicted gene 14824) - Rat Genome Database

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Gene: Gm14824 (predicted gene 14824) Mus musculus
Analyze
Symbol: Gm14824
Name: predicted gene 14824
RGD ID: 5147057
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Crb1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X104,371,316 - 104,372,082 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX104,371,345 - 104,372,081 (-)EnsemblGRCm39 Ensembl
GRCm38X105,327,710 - 105,328,476 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX105,327,739 - 105,328,475 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X102,523,059 - 102,523,972 (-)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX92,187,689 - 92,188,602 (-)NCBICelera
Cytogenetic MapXDNCBI
cM MapX46.89NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14824
20 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:159
Count of miRNA genes:152
Interacting mature miRNAs:155
Transcripts:ENSMUST00000119421
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
1357500Mdmsc6_mmodifier of muscularity 6 (mouse)Not determinedX75306671109306758Mouse
11075102Modc2_mmodifier of Odc2 (mouse)X80189914114190059Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_017935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL672047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000119421
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX104,371,345 - 104,372,081 (-)Ensembl
GRCm38.p6 EnsemblX105,327,739 - 105,328,475 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000083744 Ensembl, ENTREZGENE
MGD MGI:3802065 ENTREZGENE
NCBI Gene 100417181 ENTREZGENE
PhenoGen Gm14824 PhenoGen