Gm14997 (predicted gene 14997) - Rat Genome Database

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Gene: Gm14997 (predicted gene 14997) Mus musculus
Analyze
Symbol: Gm14997
Name: predicted gene 14997
RGD ID: 5146977
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Parl  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X135,230,594 - 135,231,223 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX135,230,588 - 135,231,223 (-)EnsemblGRCm39 Ensembl
GRCm38X136,329,845 - 136,330,474 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX136,329,839 - 136,330,474 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X132,864,384 - 132,865,013 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Cytogenetic MapXF1NCBI
cM MapX57.91NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14997
13 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:45
Interacting mature miRNAs:45
Transcripts:ENSMUST00000119232
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX120993165160213038Mouse
25314309Syncl5_msynaptonemal complex length 5 (mouse)X121909697152582996Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX125685149159685269Mouse
13824981Svwq2_mseminal vesicle weight QTL 2 (mouse)X128900749153782996Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX133540040165298595Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_017969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL671493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000119232
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX135,230,588 - 135,231,223 (-)Ensembl
GRCm38.p6 EnsemblX136,329,839 - 136,330,474 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000083324 Ensembl, ENTREZGENE
MGD MGI:3705390 ENTREZGENE
NCBI Gene 100417629 ENTREZGENE
PhenoGen Gm14997 PhenoGen