Gm14517 (predicted gene 14517) - Rat Genome Database

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Gene: Gm14517 (predicted gene 14517) Mus musculus
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Symbol: Gm14517
Name: predicted gene 14517
RGD ID: 5146483
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: transcription elongation factor B polypeptide 1-like
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X15,390,664 - 15,394,092 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX15,390,664 - 15,391,000 (-)EnsemblGRCm39 Ensembl
GRCm38X15,524,425 - 15,527,853 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX15,524,425 - 15,524,761 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X15,101,551 - 15,104,055 (-)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX13,158,194 - 13,160,698 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX10.6NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14517
55 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:74
Count of miRNA genes:74
Interacting mature miRNAs:74
Transcripts:ENSMUST00000119040
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302195Pbwg10_mpostnatal body weight growth 10 (mouse)Not determinedX126202173Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1301551Spha1_msperm head anomaly 1 (mouse)Not determinedX1026622539921652Mouse
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse


Expression


Sequence


RefSeq Acc Id: ENSMUST00000119040
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX15,390,664 - 15,391,000 (-)Ensembl
GRCm38.p6 EnsemblX15,524,425 - 15,524,761 (-)Ensembl
RefSeq Acc Id: XM_003945599   ⟹   XP_003945648
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X15,524,425 - 15,527,853 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006527713   ⟹   XP_006527776
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X15,524,425 - 15,526,929 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000081994 Ensembl
MGD MGI:3705676 ENTREZGENE
NCBI Gene 100503053 ENTREZGENE
PhenoGen Gm14517 PhenoGen