Gm15567 (predicted gene 15567) - Rat Genome Database

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Gene: Gm15567 (predicted gene 15567) Mus musculus
Analyze
Symbol: Gm15567
Name: predicted gene 15567
RGD ID: 5146207
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39 Ensembl726,948,688 - 26,957,357 (-)EnsemblGRCm39 Ensembl
GRCm38727,249,263 - 27,257,935 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl727,249,263 - 27,257,932 (-)EnsemblGRCm38mm10GRCm38
MGSCv37728,034,279 - 28,042,954 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera721,826,173 - 21,834,848 (-)NCBICelera
cM Map715.86NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14610273  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:66
Count of miRNA genes:55
Interacting mature miRNAs:61
Transcripts:ENSMUST00000148699
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH129503  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38727,257,713 - 27,257,897UniSTSGRCm38
MGSCv37728,042,732 - 28,042,916UniSTSGRCm37
Celera721,834,626 - 21,834,810UniSTS
Cytogenetic Map7A3UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_105074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_107882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000148699
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl726,948,688 - 26,957,357 (-)Ensembl
GRCm38.p6 Ensembl727,249,263 - 27,257,932 (-)Ensembl
RefSeq Acc Id: XR_105074
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38727,249,263 - 27,257,935 (-)ENTREZGENE
MGSCv37728,034,279 - 28,042,954 (-)ENTREZGENE
cM Map7 ENTREZGENE
RefSeq Acc Id: XR_107882
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
Celera721,826,176 - 21,834,848 (-)ENTREZGENE

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000084974 Ensembl
MGD MGI:3783016 ENTREZGENE
NCBI Gene 100503685 ENTREZGENE
PhenoGen Gm15567 PhenoGen