Spata31h2 (SPATA31 subfamily H member 2) - Rat Genome Database

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Gene: Spata31h2 (SPATA31 subfamily H member 2) Mus musculus
Analyze
No known orthologs.
Symbol: Spata31h2
Name: SPATA31 subfamily H member 2
RGD ID: 5146123
MGI Page MGI
Description: Orthologous to human SPATA31H1 (SPATA31 subfamily H member 1).
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Gm17434; uncharacterized protein C2orf16-like; uncharacterized protein Gm17434; uncharacterized protein LOC102635566; uncharacterized protein Spata31h2
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39523,519,347 - 23,544,648 (+)NCBIGRCm39GRCm39mm39
GRCm38523,314,349 - 23,339,650 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37522,839,625 - 22,845,022 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera520,274,919 - 20,282,141 (+)NCBICelera
Cytogenetic Map5A3NCBI
cM Map510.28NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Spata31h2
781 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10412081Bwq13_mbody weight QTL 13 (mouse)Not determined5123606323Mouse
12904958Gmmq8_mgastrocnemius muscle mass QTL 8 (mouse)5129421124Mouse
10401122Pgia41_mproteoglycan induced arthritis 41 (mouse)Not determined582314434823280Mouse
15039371Nmrs21_mNAFLD-associated magnetic resonance shift 21 (mouse)5350482337504823Mouse
1301806Actd2_mactivity-distance traveled 2 (mouse)Not determined5538452039384652Mouse
4141207Imrfq1_mimmune response to Factor IX QTL 1 (mouse)Not determined5812411742124239Mouse
7394748Mom5_mmodifier of Min 5 (mouse)Not determined5884767233475637Mouse
1301693Sle6_msystemic lupus erythematosus susceptibility 6 (mouse)Not determined5889069387841837Mouse
1357478Kdnw1_mkidney weight 1 (mouse)Not determined5891594940529869Mouse
14696730Kidlq1_mkidney weight, left QTL 1 (mouse)51356315247563152Mouse
1301685Estq2_mestradiol regulated response QTL 2 (mouse)Not determined51563408449634190Mouse
1300719Iba5_minduction of brown adipocytes 5 (mouse)Not determined52068699354687134Mouse
1301776Skts3_mskin tumor susceptibility 3 (mouse)Not determined52166729555667403Mouse
11537368Hmtb10_mhemostasis and thrombosis 10 (mouse)52210082354500318Mouse
11537367Hmtb11_mhemostasis and thrombosis 11 (mouse)52210082364806579Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_017321194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC138671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_017321194   ⟹   XP_017176683
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39523,519,347 - 23,544,648 (+)NCBI
GRCm38523,314,349 - 23,339,650 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_017176683 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_017176683   ⟸   XM_017321194
- Sequence:


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:4937068 AgrOrtholog
MGD MGI:4937068 ENTREZGENE
NCBI Gene Gm17434 ENTREZGENE
PhenoGen Spata31h2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-02 Spata31h2  SPATA31 subfamily H member 2  Gm17434  predicted gene, 17434  Symbol and/or name updated 27372883 PROVISIONAL