Gm18101 (predicted gene, 18101) - Rat Genome Database

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Gene: Gm18101 (predicted gene, 18101) Mus musculus
Analyze
Symbol: Gm18101
Name: predicted gene, 18101
RGD ID: 5143463
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Rnf5  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399120,584,044 - 120,584,591 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9120,584,045 - 120,584,592 (-)EnsemblGRCm39 Ensembl
GRCm389120,754,978 - 120,755,525 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9120,754,979 - 120,755,526 (-)EnsemblGRCm38mm10GRCm38
MGSCv379120,664,096 - 120,664,643 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera9121,221,439 - 121,221,983 (-)NCBICelera
Cytogenetic Map9F4NCBI
cM Map971.85NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm18101
22 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103118511124359700Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103118511124359700Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103118511124359700Mouse

Markers in Region
RH124616  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381734,601,309 - 34,601,405UniSTSGRCm38
GRCm389120,754,707 - 120,754,811UniSTSGRCm38
MGSCv379120,663,825 - 120,663,929UniSTSGRCm37
MGSCv371734,738,254 - 34,738,350UniSTSGRCm37
Celera1737,696,469 - 37,696,565UniSTS
Celera9121,221,168 - 121,221,272UniSTS
Cytogenetic Map17B1UniSTS
cM Map1718.75UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_020930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000215769
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9120,584,045 - 120,584,592 (-)Ensembl
GRCm38.p6 Ensembl9120,754,979 - 120,755,526 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000110726 Ensembl, ENTREZGENE
MGD MGI:5010286 ENTREZGENE
NCBI Gene 100416409 ENTREZGENE
PhenoGen Gm18101 PhenoGen