Gm18339 (predicted gene, 18339) - Rat Genome Database

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Gene: Gm18339 (predicted gene, 18339) Mus musculus
Analyze
Symbol: Gm18339
Name: predicted gene, 18339
RGD ID: 5143221
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Tada1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391256,713,756 - 56,714,643 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1256,713,756 - 56,714,643 (+)EnsemblGRCm39 Ensembl
GRCm381256,666,971 - 56,667,858 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1256,666,971 - 56,667,858 (+)EnsemblGRCm38mm10GRCm38
MGSCv371257,767,958 - 57,768,845 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1257,832,787 - 57,833,674 (+)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1224.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Gm18339
24 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse
1357757Lnopy2_mlens opacity 2 (mouse)Not determined125284662686846796Mouse
1357749Vtbt13_mvertebral trabecular bone trait 13 (mouse)Not determined125313200287132145Mouse
12904004Opfaq11_mopen field activity QTL 11 (mouse)125315562457276756Mouse
12832727Ahrq1_mairway hyperresponsiveness QTL 1 (mouse)125469591082665939Mouse
12903999Opfaq8_mopen field activity QTL 8 (mouse)125490765357870585Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_018338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC160393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000218074
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1256,713,756 - 56,714,643 (+)Ensembl
GRCm38.p6 Ensembl1256,666,971 - 56,667,858 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000112886 Ensembl, ENTREZGENE
MGD MGI:5010524 ENTREZGENE
NCBI Gene 100416961 ENTREZGENE
PhenoGen Gm18339 PhenoGen