Gm19189 (predicted gene, 19189) - Rat Genome Database

Name: Gm19189
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Gm19189 (predicted gene, 19189) Mus musculus

Analyze

Symbol:

Gm19189

Name:

predicted gene, 19189

RGD ID:

5142361

MGI Page

MGI

Description:

Type:

pseudo (Ensembl: processed_pseudogene)

RefSeq Status:

INFERRED

Related Functional Gene:

Gnai3

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	15,038,078 - 15,038,722 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	15,036,585 - 15,038,721 (+)	Ensembl		GRCm39 Ensembl
GRCm38	13	14,863,493 - 14,864,137 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	14,862,000 - 14,864,136 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	14,955,760 - 14,956,404 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	13	15,158,734 - 15,159,378 (+)	NCBI		Celera
Cytogenetic Map	13	A1	NCBI
cM Map	13	5.39	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

Genomics

Variants

Variants in Gm19189
3 total Variants

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1301890	Adip7_m	adiposity 7 (mouse)			Not determined		13	1	23454672	Mouse
1301227	Skull19_m	skull morphology 19 (mouse)			Not determined		13	1	23454672	Mouse
1301661	Tshp13_m	tooth shape 13 (mouse)			Not determined		13	1	23454672	Mouse
1301255	Cd4ts6_m	CD4 T cell subset 6 (mouse)			Not determined		13	168545	34168684	Mouse
10449140	Eosn2_m	eosinophil differential 2 (mouse)					13	221311	34221311	Mouse
15039338	Nmrs34_m	NAFLD-associated magnetic resonance shift 34 (mouse)					13	221311	34221311	Mouse
1301455	Bmd3_m	bone mineral density 3 (mouse)			Not determined		13	3477612	37477820	Mouse
10045624	Heal24_m	wound healing/regeneration (mouse)			Not determined		13	3477612	37477820	Mouse
10045625	Heal23_m	wound healing/regeneration 23 (mouse)			Not determined		13	3477612	37477820	Mouse
1301367	Twq1_m	testis weight QTL 1 (mouse)			Not determined		13	3615512	37615672	Mouse
1301733	Heal3_m	wound healing/regeneration 3 (mouse)			Not determined		13	3680200	37680343	Mouse
26884393	Humsd7_m	humerus midshaft diameter 7, 16 week (mouse)					13	3950000	76048119	Mouse
1558898	Hpi1_m	hapatic PMN infiltration 1 (mouse)			Not determined		13	4414025	53101640	Mouse

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NG_019459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000221689

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	13	15,036,585 - 15,038,721 (+)	Ensembl
GRCm38.p6 Ensembl	13	14,862,000 - 14,864,136 (+)	Ensembl

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000113686	Ensembl
MGD	MGI:5011374	ENTREZGENE
NCBI Gene	100418406	ENTREZGENE
PhenoGen	Gm19189	PhenoGen

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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