Gm16867 (predicted gene, 16867) - Rat Genome Database

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Gene: Gm16867 (predicted gene, 16867) Mus musculus
Analyze
No known orthologs.
Symbol: Gm16867
Name: predicted gene, 16867
RGD ID: 5137557
MGI Page MGI
Description: Orthologous to human SLC25A37 (solute carrier family 25 member 37). [provided by Alliance of Genome Resources, Apr 2022]
Type: protein-coding
RefSeq Status: MODEL
Previously known as: AA437542; BB104597; D530039A21Rik; Gm21464; Gm28049; hypothetical protein LOC78584; predicted gene, 21464; RIKEN cDNA D530039A21 gene; uncharacterized protein Gm16867; uncharacterized protein LOC100862085; uncharacterized protein LOC78584
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391469,589,092 - 69,741,529 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1469,600,953 - 69,740,811 (-)EnsemblGRCm39 Ensembl
GRCm381469,363,290 - 69,504,080 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1469,363,504 - 69,503,362 (-)EnsemblGRCm38mm10GRCm38
MGSCv371469,981,558 - 69,990,659 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera1467,136,954 - 67,150,237 (-)NCBICelera
Cytogenetic Map14D2NCBI
cM Map1436.06NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:24316575  


Genomics

Variants

.
Variants in Gm16867
3358 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
1300605El5_mepilepsy 5 (mouse)Not determined144945542583455556Mouse
4142364Pbwg18_mpostnatal body weight growth 18 (mouse)Not determined145228198486282125Mouse
1301489Lbm10_mlean body mass 10 (mouse)Not determined145376129687761529Mouse
12880432Fgf23lq3_mFGF23 serum level QTL 3 (mouse)145393744087937440Mouse
10043889Cia52_mcollagen induced arthritis QTL 52 (mouse)Not determined145608238190082509Mouse
1301562Hwq1_mheart weight quantitative locus 1 (mouse)Not determined145654674590546941Mouse
1357565wrmod1_mwobbler modifier 1 (mouse)Not determined1458179640101859473Mouse
11039527Ccc2_mcolitis susceptibility in the Collaborative Cross 2 (mouse)145991861294138217Mouse
1300666Fembm2_mfemoral bone morphometry 2 (mouse)Not determined146239746096397680Mouse

Markers in Region
AI414893  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381469,584,678 - 69,584,784UniSTSGRCm38
GRCm381469,366,428 - 69,366,534UniSTSGRCm38
MGSCv371469,984,485 - 69,984,591UniSTSGRCm37
Celera1467,139,876 - 67,139,982UniSTS
Cytogenetic Map14D2UniSTS
Whitehead/MRC_RH14789.55UniSTS
UniSTS:237217  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381469,582,206 - 69,582,356UniSTSGRCm38
GRCm381469,363,956 - 69,364,106UniSTSGRCm38
MGSCv371469,982,013 - 69,982,163UniSTSGRCm37
Celera1467,137,404 - 67,137,554UniSTS
Cytogenetic Map14D2UniSTS
UniSTS:237219  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381469,584,553 - 69,584,815UniSTSGRCm38
GRCm381469,366,303 - 69,366,565UniSTSGRCm38
MGSCv371469,984,360 - 69,984,622UniSTSGRCm37
Celera1467,139,751 - 67,140,013UniSTS
Cytogenetic Map14D2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_011245290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030248111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004938675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004938676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004938677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004938678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004938679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_874773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA437542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC134575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC214054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC242398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AV227609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW493533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB104597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC086315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000179116   ⟹   ENSMUSP00000135940
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,699,758 - 69,740,811 (-)Ensembl
GRCm38.p6 Ensembl1469,462,309 - 69,503,362 (-)Ensembl
RefSeq Acc Id: ENSMUST00000180059   ⟹   ENSMUSP00000137543
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,726,398 - 69,740,681 (-)Ensembl
GRCm38.p6 Ensembl1469,488,949 - 69,503,232 (-)Ensembl
RefSeq Acc Id: ENSMUST00000183695   ⟹   ENSMUSP00000138883
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,602,551 - 69,740,685 (-)Ensembl
GRCm38.p6 Ensembl1469,365,102 - 69,503,236 (-)Ensembl
RefSeq Acc Id: ENSMUST00000183840   ⟹   ENSMUSP00000138845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,611,275 - 69,740,811 (-)Ensembl
GRCm38.p6 Ensembl1469,373,826 - 69,503,362 (-)Ensembl
RefSeq Acc Id: ENSMUST00000183917   ⟹   ENSMUSP00000139085
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,600,953 - 69,740,769 (-)Ensembl
GRCm38.p6 Ensembl1469,363,504 - 69,503,320 (-)Ensembl
RefSeq Acc Id: ENSMUST00000184039
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,656,843 - 69,663,926 (-)Ensembl
GRCm38.p6 Ensembl1469,419,394 - 69,426,477 (-)Ensembl
RefSeq Acc Id: ENSMUST00000184816   ⟹   ENSMUSP00000138904
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1469,601,363 - 69,740,675 (-)Ensembl
GRCm38.p6 Ensembl1469,363,914 - 69,503,226 (-)Ensembl
RefSeq Acc Id: XM_011245290   ⟹   XP_011243592
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,722,051 - 69,741,243 (-)NCBI
GRCm381469,484,142 - 69,503,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245291   ⟹   XP_011243593
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,630,009 - 69,741,243 (-)NCBI
GRCm381469,393,533 - 69,503,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245293   ⟹   XP_011243595
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,723,720 - 69,741,243 (-)NCBI
GRCm381469,487,499 - 69,503,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245294   ⟹   XP_011243596
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,624,825 - 69,741,243 (-)NCBI
GRCm381469,387,376 - 69,503,794 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245296   ⟹   XP_011243598
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,624,817 - 69,741,529 (-)NCBI
GRCm381469,387,368 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245297   ⟹   XP_011243599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,719,742 - 69,741,529 (-)NCBI
GRCm381469,480,335 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245298   ⟹   XP_011243600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,714,358 - 69,741,529 (-)NCBI
GRCm381469,476,909 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245299   ⟹   XP_011243601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,701,507 - 69,741,529 (-)NCBI
GRCm381469,464,058 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245300   ⟹   XP_011243602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,723,720 - 69,741,529 (-)NCBI
GRCm381469,487,499 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245301   ⟹   XP_011243603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,691,271 - 69,741,529 (-)NCBI
GRCm381469,453,822 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011245302   ⟹   XP_011243604
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,687,449 - 69,741,529 (-)NCBI
GRCm381469,450,000 - 69,504,080 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030248111   ⟹   XP_030103971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,611,687 - 69,741,243 (-)NCBI
GRCm381469,374,238 - 69,503,794 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004938675
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,600,739 - 69,741,243 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004938676
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,589,092 - 69,741,243 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004938677
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,600,739 - 69,741,243 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004938678
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,600,739 - 69,740,490 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004938679
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,600,739 - 69,741,243 (-)NCBI
Sequence:
RefSeq Acc Id: XR_874773
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391469,656,395 - 69,741,243 (-)NCBI
GRCm381469,418,946 - 69,503,794 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_011243598   ⟸   XM_011245296
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011243596   ⟸   XM_011245294
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011243593   ⟸   XM_011245291
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011243604   ⟸   XM_011245302
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_011243603   ⟸   XM_011245301
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_011243601   ⟸   XM_011245299
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_011243600   ⟸   XM_011245298
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_011243599   ⟸   XM_011245297
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011243592   ⟸   XM_011245290
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011243595   ⟸   XM_011245293
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011243602   ⟸   XM_011245300
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_030103971   ⟸   XM_030248111
- Peptide Label: isoform X5
RefSeq Acc Id: ENSMUSP00000138904   ⟸   ENSMUST00000184816
RefSeq Acc Id: ENSMUSP00000139085   ⟸   ENSMUST00000183917
RefSeq Acc Id: ENSMUSP00000138883   ⟸   ENSMUST00000183695
RefSeq Acc Id: ENSMUSP00000138845   ⟸   ENSMUST00000183840
RefSeq Acc Id: ENSMUSP00000135940   ⟸   ENSMUST00000179116
RefSeq Acc Id: ENSMUSP00000137543   ⟸   ENSMUST00000180059

Promoters
RGD ID:8682852
Promoter ID:EPDNEW_M19457
Type:initiation region
Name:Gm16867_1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381469,503,320 - 69,503,380EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:4439791 AgrOrtholog
Ensembl Genes ENSMUSG00000034248 UniProtKB/TrEMBL
  ENSMUSG00000093954 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000180059.3 UniProtKB/TrEMBL
  ENSMUST00000183882.2 UniProtKB/TrEMBL
  ENSMUST00000183917.8 UniProtKB/TrEMBL
MGD MGI:4439791 ENTREZGENE
NCBI Gene 100862085 ENTREZGENE
PANTHER MITOFERRIN-1 UniProtKB/TrEMBL
  MITOFERRIN-1-RELATED UniProtKB/TrEMBL
PhenoGen Gm16867 PhenoGen
UniProt J3QPY4_MOUSE UniProtKB/TrEMBL
  V9GXC4_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-04-10 Gm16867  predicted gene, 16867  D530039A21Rik  RIKEN cDNA D530039A21 gene  Data merged from RGD:1611168 737654 PROVISIONAL
2016-03-15 Gm16867  predicted gene, 16867  Gm21464  predicted gene, 21464  Data merged from RGD:7179897 737654 PROVISIONAL