Mir467a-3 (microRNA 467a-3) - Rat Genome Database

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Pathways
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Gene: Mir467a-3 (microRNA 467a-3) Mus musculus
Analyze
Symbol: Mir467a-3
Name: microRNA 467a-3
RGD ID: 4891362
MGI Page MGI
Description: Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; long-term synaptic potentiation; and sensory perception of sound. Part of RISC complex.
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: Mirn46; Mirn467a-3; mmu-mir-467a-3
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39210,488,489 - 10,488,571 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl210,488,489 - 10,488,571 (+)EnsemblGRCm39 Ensembl
GRCm38210,483,678 - 10,483,760 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl210,483,678 - 10,483,760 (+)EnsemblGRCm38mm10GRCm38
Celera210,424,184 - 10,424,266 (+)NCBICelera
Cytogenetic Map2A1NCBI
cM Map28.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
RISC complex  (IDA)

References
Additional References at PubMed
PMID:16381832   PMID:20413612   PMID:20439489   PMID:21267068   PMID:21911408   PMID:23185045   PMID:23646144   PMID:25858512  


Genomics


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045633Heal15_mwound healing/regeneration 15 (mouse)Not determined2121989642Mouse
4141836Tgq11_mtriglyceride QTL 11 (mouse)Not determined125324559Mouse
4142333Tgq10_mtriglyceride QTL 10 (mouse)Not determined125324559Mouse
1301838Sluc16_msusceptibility to lung cancer 16 (mouse)Not determined2126529589Mouse
12904743Carcdq3_mcardiac collagen deposition QTL 3 (mouse)2323494028179150Mouse
1301769Orgwq2_morgan weight QTL 2 (mouse)Not determined2388712693421651Mouse
1301980Fcsa5_mfemoral cross-sectional area 5 (mouse)Not determined2767911541679261Mouse
1301790Pcfm1_mperiosteal circumference and femur length 1 (mouse)Not determined2823629642236396Mouse
10043876Adip22_madiposity 22 (mouse)Not determined2830805142308240Mouse
1300624Insq7_minsulin QTL 7 (mouse)Not determined2938444643384575Mouse
10755513Amzn4_manatomical modifier of Zfp423 4 (mouse)2938444643384575Mouse
12903993Opfaq1_mopen field activity QTL 1 (mouse)2967669127022642Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_037252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL772216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000178082
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl210,483,678 - 10,483,760 (+)Ensembl
RefSeq Acc Id: ENSMUST00000240232
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl210,488,489 - 10,488,571 (+)Ensembl
RefSeq Acc Id: NR_037252
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39210,488,489 - 10,488,571 (+)NCBI
GRCm38210,483,678 - 10,483,760 (+)ENTREZGENE
Celera210,424,184 - 10,424,266 (+)NCBI
cM Map2 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000095198 Ensembl
  ENSMUSG00000119931 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000240232 ENTREZGENE
MGD MGI:3719572 ENTREZGENE
miRBase MI0014056 ENTREZGENE
NCBI Gene 100124642 ENTREZGENE
PhenoGen Mir467a-3 PhenoGen
RNAcentral URS00002AE7F1 RNACentral
  URS00004D11A8 RNACentral
  URS000075B3F1 RNACentral