Mir1264 (microRNA 1264) - Rat Genome Database
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Gene: Mir1264 (microRNA 1264) Mus musculus
Analyze
Symbol: Mir1264
Name: microRNA 1264
RGD ID: 4888692
MGI Page MGI
Description: Orthologous to human MIR1264 (microRNA 1264).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-1264; mmu-mir-1264
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X145,793,597 - 145,793,682 (+)NCBIGRCm39mm39
GRCm38X147,010,601 - 147,010,686 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX147,010,601 - 147,010,686 (+)EnsemblGRCm38mm10GRCm38
CeleraX130,950,815 - 130,950,900 (+)NCBICelera
Cytogenetic MapXF2NCBI
cM MapX68.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
radon atom  (ISO)
radon(0)  (ISO)

References
Additional References at PubMed
PMID:16381832   PMID:16954537   PMID:20413612   PMID:21037258  


Genomics

Comparative Map Data
Mir1264
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X145,793,597 - 145,793,682 (+)NCBIGRCm39mm39
GRCm38X147,010,601 - 147,010,686 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX147,010,601 - 147,010,686 (+)EnsemblGRCm38mm10GRCm38
CeleraX130,950,815 - 130,950,900 (+)NCBICelera
Cytogenetic MapXF2NCBI
cM MapX68.46NCBI
MIR1264
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX114,652,655 - 114,652,723 (+)EnsemblGRCh38hg38GRCh38
GRCh38X114,652,655 - 114,652,723 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X113,887,130 - 113,887,198 (+)NCBIGRCh37GRCh37hg19GRCh37
CeleraX114,322,328 - 114,322,396 (+)NCBI
Cytogenetic MapXq23NCBI
HuRefX103,473,343 - 103,473,411 (+)NCBIHuRef
CHM1_1X113,798,064 - 113,798,132 (+)NCBICHM1_1


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7360056151324042Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X55000000150000000Mouse
13208552Wght12_mweight 12 (mouse)X95000000151000000Mouse
13208556Lgth14_mbody length 14 (mouse)X95000000151000000Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX103012242163975945Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX122083468161430042Mouse
25314309Syncl5_msynaptonemal complex length 5 (mouse)X123000000153800000Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX126902153160902273Mouse
13824981Svwq2_mseminal vesicle weight QTL 2 (mouse)X130000000155000000Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX134639291166515599Mouse
1301276Tswt_mtestis weight (mouse)Not determinedX139475662152006342Mouse
1302000Pgia25_mproteoglycan induced arthritis 2 (mouse)Not determinedX145691384171031299Mouse
10401118Pgia39_mproteoglycan induced arthritis 39 (mouse)Not determinedX145691384171031299Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:26667
Count of gene targets:12098
Count of transcripts:20792
Interacting mature miRNAs:mmu-miR-1264-3p, mmu-miR-1264-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000175381
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX147,010,601 - 147,010,686 (+)Ensembl
RefSeq Acc Id: NR_037205
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X145,793,597 - 145,793,682 (+)NCBI
GRCm38X147,010,601 - 147,010,686 (+)ENTREZGENE
CeleraX130,950,815 - 130,950,900 (+)ENTREZGENE
cM MapX ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:4834216 AgrOrtholog
Ensembl Genes ENSMUSG00000093122 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000175381 ENTREZGENE
MGD MGI:4834216 ENTREZGENE
miRBase MI0004130 ENTREZGENE
NCBI Gene 100526460 ENTREZGENE
PhenoGen Mir1264 PhenoGen
RNAcentral URS00003205EB RNACentral
  URS0000618F01 RNACentral
  URS000075C7EE RNACentral