Mir1193 (microRNA 1193) - Rat Genome Database
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Gene: Mir1193 (microRNA 1193) Mus musculus
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Symbol: Mir1193
Name: microRNA 1193
RGD ID: 4885673
MGI Page MGI
Description: Orthologous to human MIR1179 (microRNA 1179).
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: mir-1193; Mirn1; Mirn1193; mmu-mir-1193
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912109,682,105 - 109,682,225 (+)NCBIGRCm39mm39
GRCm39 Ensembl12109,682,105 - 109,682,225 (+)Ensembl
GRCm3812109,715,671 - 109,715,791 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12109,715,671 - 109,715,791 (+)EnsemblGRCm38mm10GRCm38
Celera12110,912,897 - 110,913,017 (+)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1260.56NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:16381832   PMID:17989215   PMID:20215419   PMID:20413612   PMID:21037258   PMID:22144232  


Genomics

Comparative Map Data
Mir1193
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912109,682,105 - 109,682,225 (+)NCBIGRCm39mm39
GRCm39 Ensembl12109,682,105 - 109,682,225 (+)Ensembl
GRCm3812109,715,671 - 109,715,791 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12109,715,671 - 109,715,791 (+)EnsemblGRCm38mm10GRCm38
Celera12110,912,897 - 110,913,017 (+)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1260.56NCBI
MIR1179
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1588,608,107 - 88,608,197 (+)EnsemblGRCh38hg38GRCh38
GRCh381588,608,107 - 88,608,197 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371589,151,338 - 89,151,428 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera1565,552,227 - 65,552,317 (+)NCBI
Cytogenetic Map15q26.1NCBI
HuRef1565,263,235 - 65,263,325 (+)NCBIHuRef
CHM1_11588,992,972 - 88,993,062 (+)NCBICHM1_1


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235235497109969809Mouse
27226793Feml10_mfemur length 10, 5 week (mouse)1268300000113400000Mouse
13524842Ppiq10a_mprepulse inhibition QTL 10a (mouse)1277545446111545446Mouse
4142401Egq10_mearly growth QTL 10 (mouse)Not determined80909934113419913Mouse
4141335W6q10_mweight 6 weeks QTL 10 (mouse)Not determined80909934113419913Mouse
4141610Tailaq1_mtail length adjusted QTL 1 (mouse)Not determined80909934113419913Mouse
1357701Lvrq10_mliver weight QTL 10 (mouse)Not determined1280909934113419913Mouse
39128213Lwq23_mliver weight QTL 10 (mouse)1280909934113419913Mouse
13524849Ppiq11a_mprepulse inhibition QTL 11a (mouse)1281022884115022884Mouse
13524846Ppiq11_mprepulse inhibition QTL 11 (mouse)1282700137116700137Mouse
1301879Insq10_minsulin QTL 10 (mouse)Not determined1283565816117565965Mouse
1301492Dbsty3_mdiabesity 3 (mouse)Not determined1283565816117565965Mouse
1300883Ath21_matherosclerosis 21 (mouse)Not determined1285995320119995424Mouse
10412156Nociq3_mnociceptive sensitivity inflammatory QTL 3 (mouse)Not determined1286349301114868033Mouse
4142007Chlq17_mcirculating hormone level QTL 17 (mouse)Not determined1288086615120129022Mouse
1300545Lifespan3_mlife span 3 (mouse)Not determined1288086615120129022Mouse
1301308Prdt4_mprion disease incubation time 4 (mouse)Not determined1288342095120129022Mouse
5491194Mobq3_mmultigenic obesity QTL 3 (mouse)Not determined1289697812120129022Mouse
1301836Heal5_mwound healing/regeneration 5 (mouse)Not determined1289972772120129022Mouse
1301922Bbaa6_mB.burgdorferi-associated arthritis 6 (mouse)Not determined1290342009120129022Mouse
10402491Dipa4_mdrug induced psychomotor activation 4 (mouse)Not determined1291256256120129022Mouse
12910532Nrq10a_mnoise-induced hearing loss resistant QTL 10a (mouse)1292783591120129022Mouse
12910533Nrq10_mnoise-induced hearing loss resistant QTL 10 (mouse)1292783591120129022Mouse
1357463Vtbt14_mvertebral trabecular bone trait 14 (mouse)Not determined1292969663120129022Mouse
1300973Abmm_mantibody mediated myocarditis (mouse)Not determined1293298027120129022Mouse
1302177Dps2_mdelta power in slow-wave sleep 2 (mouse)Not determined1294179630120129022Mouse
1302138Im6_mimmunoregulatory 6 (mouse)Not determined1296896717120129022Mouse
1301269Sluc12_msusceptibility to lung cancer 12 (mouse)Not determined1296896717120129022Mouse
10412075Nils1_mneointima lesion size 1 (mouse)Not determined12102060930120129022Mouse
4141297Plyid_mPolymeric IgA dominance (mouse)Not determined109217459115921502Mouse

miRNA Target Status

Predicted Targets
Summary Value
Count of predictions:14066
Count of gene targets:7368
Count of transcripts:11644
Interacting mature miRNAs:mmu-miR-1193-3p, mmu-miR-1193-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000116761
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl12109,715,671 - 109,715,791 (+)Ensembl
RefSeq Acc Id: NR_035424
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3912109,682,105 - 109,682,225 (+)NCBI
GRCm3812109,715,671 - 109,715,791 (+)ENTREZGENE
Celera12110,912,897 - 110,913,017 (+)ENTREZGENE
cM Map12 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3783366 AgrOrtholog
Ensembl Genes ENSMUSG00000080411 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000116761 ENTREZGENE
MGD MGI:3783366 ENTREZGENE
miRBase MI0006298 ENTREZGENE
NCBI Gene 100316673 ENTREZGENE
PhenoGen Mir1193 PhenoGen
RNAcentral URS00002D4744 RNACentral
  URS000030E20E RNACentral
  URS000075B939 RNACentral