FTH1P27 (ferritin heavy chain 1 pseudogene 27) - Rat Genome Database

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Gene: FTH1P27 (ferritin heavy chain 1 pseudogene 27) Homo sapiens
Analyze
Symbol: FTH1P27
Name: ferritin heavy chain 1 pseudogene 27
RGD ID: 4145167
HGNC Page HGNC:39091
Description: INTERACTS WITH sodium arsenite
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: INFERRED
Previously known as: ferritin, heavy polypeptide 1 pseudogene 27
Related Functional Gene: FTHL17  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X37,505,267 - 37,506,035 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX37,505,310 - 37,505,860 (+)EnsemblGRCh38hg38GRCh38
GRCh37X37,364,520 - 37,365,288 (+)NCBIGRCh37GRCh37hg19GRCh37
CeleraX41,502,251 - 41,502,947 (+)NCBICelera
Cytogenetic MapXp21.1NCBI
HuRefX35,111,197 - 35,111,893 (+)NCBIHuRef
CHM1_1X37,395,658 - 37,396,354 (+)NCBICHM1_1
T2T-CHM13v2.0X36,908,818 - 36,909,586 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:350
Count of miRNA genes:326
Interacting mature miRNAs:346
Transcripts:ENST00000449509
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 3 3 3 3 1 29 1 154 6 2 2
Below cutoff 178 217 166 37 59 32 396 223 1171 108 302 218 7 154 264 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000449509
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX37,505,310 - 37,505,860 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC FTH1P27 COSMIC
Ensembl Genes ENSG00000234355 Ensembl
GTEx ENSG00000234355 GTEx
HGNC ID HGNC:39091 ENTREZGENE
Human Proteome Map FTH1P27 Human Proteome Map
NCBI Gene 100270709 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-31 FTH1P27  ferritin heavy chain 1 pseudogene 27    ferritin, heavy polypeptide 1 pseudogene 27  Symbol and/or name change 5135510 APPROVED