Parl-ps5 (presenilin associated, rhomboid-like, pseudogene 5) - Rat Genome Database

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Gene: Parl-ps5 (presenilin associated, rhomboid-like, pseudogene 5) Rattus norvegicus
Analyze
Symbol: Parl-ps5
Name: presenilin associated, rhomboid-like, pseudogene 5
RGD ID: 41296444
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC120099161; presenilins-associated rhomboid-like protein, mitochondrial
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X104,696,134 - 104,702,544 (+)NCBIGRCr8
mRatBN7.2X99,896,069 - 99,910,250 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Parl-ps5
782 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1619 BioCyc
NCBI Gene LOC120099161 ENTREZGENE
PhenoGen Parl-ps5 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Parl-ps5  presenilin associated, rhomboid-like, pseudogene 5  LOC120099161  presenilins-associated rhomboid-like protein, mitochondrial  Symbol and Name Changed 1299863 APPROVED
2021-01-27 LOC120099161  presenilins-associated rhomboid-like protein, mitochondrial      Symbol and Name status set to provisional 70820 PROVISIONAL