LOC120095545 (uncharacterized LOC120095545) - Rat Genome Database

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Gene: LOC120095545 (uncharacterized LOC120095545) Rattus norvegicus
Analyze
Symbol: LOC120095545
Name: uncharacterized LOC120095545
RGD ID: 41272276
Description:
Type: ncrna
RefSeq Status: VALIDATED
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81153,233,449 - 53,246,400 (-)NCBIGRCr8
mRatBN7.21139,775,628 - 39,777,087 (-)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map11q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC120095545
9 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)112952841860324829Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)113123913478851519Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NR_190580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_190581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_190582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_190583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_190584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001840487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005491083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005491084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005491085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010056104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_595041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XR_001840487
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,379 (-)NCBI
RefSeq Acc Id: XR_005491083
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,241,107 - 53,246,379 (-)NCBI
RefSeq Acc Id: XR_005491084
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,635 - 53,246,379 (-)NCBI
mRatBN7.21139,775,628 - 39,777,006 (-)NCBI
RefSeq Acc Id: XR_005491085
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,372 (-)NCBI
mRatBN7.21139,775,628 - 39,777,087 (-)NCBI
RefSeq Acc Id: XR_010056098
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,379 (-)NCBI
RefSeq Acc Id: XR_010056099
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,400 (-)NCBI
RefSeq Acc Id: XR_010056100
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,241,107 - 53,246,388 (-)NCBI
RefSeq Acc Id: XR_010056101
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,635 - 53,246,379 (-)NCBI
RefSeq Acc Id: XR_010056103
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,379 (-)NCBI
RefSeq Acc Id: XR_010056104
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,362 (-)NCBI
RefSeq Acc Id: XR_595041
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81153,233,449 - 53,246,379 (-)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-21624 BioCyc
NCBI Gene LOC120095545 ENTREZGENE
PhenoGen LOC120095545 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120095545  uncharacterized LOC120095545      Symbol and Name status set to provisional 70820 PROVISIONAL