LOC120103623 (uncharacterized LOC120103623) - Rat Genome Database

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Gene: LOC120103623 (uncharacterized LOC120103623) Rattus norvegicus
Analyze
Symbol: LOC120103623
Name: uncharacterized LOC120103623
RGD ID: 41239806
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86134,559,128 - 134,586,223 (+)NCBIGRCr8
mRatBN7.26128,737,719 - 128,764,820 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map6q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC120103623
42 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
1298087Iddm18Insulin dependent diabetes mellitus QTL 180.0001urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)6116506292130245370Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
2312560Pur20Proteinuria QTL 202.10.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XR_005506306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005506319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XR_005506306
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,129 - 134,586,223 (+)NCBI
mRatBN7.26128,737,719 - 128,764,820 (+)NCBI
RefSeq Acc Id: XR_005506319
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,128 - 134,586,223 (+)NCBI
mRatBN7.26128,737,719 - 128,764,820 (+)NCBI
RefSeq Acc Id: XR_010052840
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,138 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052841
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,128 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052842
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,128 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052843
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,133 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052844
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,137 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052845
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,137 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052846
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,136 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052847
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,137 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052848
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,138 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052849
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,138 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052850
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,137 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052851
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,138 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052852
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,137 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052853
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,139 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052854
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,137 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052855
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,140 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052856
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,138 - 134,586,223 (+)NCBI
RefSeq Acc Id: XR_010052857
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86134,559,139 - 134,586,223 (+)NCBI

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-35974 BioCyc
NCBI Gene LOC120103623 ENTREZGENE
PhenoGen LOC120103623 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120103623  uncharacterized LOC120103623      Symbol and Name status set to provisional 70820 PROVISIONAL