LOC120097931 (serine/arginine repetitive matrix protein 3-like) - Rat Genome Database

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Gene: LOC120097931 (serine/arginine repetitive matrix protein 3-like) Rattus norvegicus
Analyze
Symbol: LOC120097931
Name: serine/arginine repetitive matrix protein 3-like
RGD ID: 41175313
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: kinesin-like protein KIF2A
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8175,106,108 - 5,126,069 (-)NCBIGRCr8
mRatBN7.2175,111,015 - 5,123,703 (-)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in LOC120097931
87 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_063276867   ⟹   XP_063132937
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8175,106,108 - 5,120,905 (-)NCBI
RefSeq Acc Id: XM_063276868   ⟹   XP_063132938
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8175,106,108 - 5,120,789 (-)NCBI
RefSeq Acc Id: XM_063276869   ⟹   XP_063132939
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8175,106,108 - 5,126,069 (-)NCBI
Protein Sequences
Protein RefSeqs XP_063132937 (Get FASTA)   NCBI Sequence Viewer  
  XP_063132938 (Get FASTA)   NCBI Sequence Viewer  
  XP_063132939 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_063132939   ⟸   XM_063276869
RefSeq Acc Id: XP_063132937   ⟸   XM_063276867
RefSeq Acc Id: XP_063132938   ⟸   XM_063276868


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-10406 BioCyc
NCBI Gene LOC120097931 ENTREZGENE
PhenoGen LOC120097931 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120097931  serine/arginine repetitive matrix protein 3-like      Symbol and Name status set to provisional 70820 PROVISIONAL