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References
Genomics
miRNA Target Status
Predicted Targets
Summary Value | Count of predictions: | 34564 | Count of gene targets: | 14166 | Count of transcripts: | 32597 | Interacting mature miRNAs: | hsa-miR-4313 | Prediction methods: | Microtar, Miranda, Pita, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
Expression
Sequence
Nucleotide Sequences
RefSeq Transcripts | NR_036198 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | AC019294 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Reference Sequences
RefSeq Acc Id: | ENST00000580760 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NR_036198 | ||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
Clinical Variants
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 15q23-25.1(chr15:70025300-78705993)x1 | copy number loss | See cases [RCV000141666] | Chr15:70025300..78705993 [GRCh38] Chr15:70317639..78998335 [GRCh37] Chr15:68104693..76785390 [NCBI36] Chr15:15q23-25.1 |
pathogenic |
GRCh38/hg38 15q23-26.3(chr15:72154949-101920998)x3 | copy number gain | See cases [RCV000143019] | Chr15:72154949..101920998 [GRCh38] Chr15:72447290..102461201 [GRCh37] Chr15:70234344..100278724 [NCBI36] Chr15:15q23-26.3 |
pathogenic |
GRCh38/hg38 15q22.2-26.3(chr15:59828460-101920998)x3 | copy number gain | See cases [RCV000142915] | Chr15:59828460..101920998 [GRCh38] Chr15:60120659..102461201 [GRCh37] Chr15:57907951..100278724 [NCBI36] Chr15:15q22.2-26.3 |
pathogenic |
GRCh38/hg38 15q24.2-26.3(chr15:75307767-101723215)x3 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052346]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052346]|See cases [RCV000052346] | Chr15:75307767..101723215 [GRCh38] Chr15:75600108..102263418 [GRCh37] Chr15:73387161..100080941 [NCBI36] Chr15:15q24.2-26.3 |
pathogenic |
GRCh38/hg38 15q23-24.2(chr15:70788624-76057736)x1 | copy number loss | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053219]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053219]|See cases [RCV000053219] | Chr15:70788624..76057736 [GRCh38] Chr15:71080963..76350077 [GRCh37] Chr15:68868017..74137132 [NCBI36] Chr15:15q23-24.2 |
pathogenic |
GRCh38/hg38 15q24.2(chr15:75596961-76049787)x1 | copy number loss | See cases [RCV000053223] | Chr15:75596961..76049787 [GRCh38] Chr15:75889302..76342128 [GRCh37] Chr15:73676357..74129183 [NCBI36] Chr15:15q24.2 |
pathogenic |
Single allele | duplication | Schizophrenia [RCV000754167] | Chr15:74071509..77878298 [GRCh38] Chr15:15q24.1-24.3 |
likely pathogenic |
Additional Information
External Database Links
Database | Acc Id | Source(s) |
COSMIC | MIR4313 | COSMIC |
Ensembl Genes | ENSG00000284385 | Ensembl, ENTREZGENE |
Ensembl Transcript | ENST00000580760 | ENTREZGENE |
GTEx | ENSG00000284385 | GTEx |
HGNC ID | HGNC:38310 | ENTREZGENE |
Human Proteome Map | MIR4313 | Human Proteome Map |
miRBase | MI0015843 | ENTREZGENE |
NCBI Gene | 100423035 | ENTREZGENE |
PharmGKB | PA165479189 | PharmGKB |
RNAcentral | URS000075A0F0 | RNACentral |
URS000075BE25 | RNACentral |