LOC120103364 (U2 spliceosomal RNA) - Rat Genome Database

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Gene: LOC120103364 (U2 spliceosomal RNA) Rattus norvegicus
Analyze
Symbol: LOC120103364
Name: U2 spliceosomal RNA
RGD ID: 40956976
Description:
Type: pseudo (Ensembl: snRNA)
RefSeq Status: MODEL
Previously known as: U2
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr858,444,469 - 8,444,595 (+)NCBIGRCr8
mRatBN7.253,661,247 - 3,661,373 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl53,661,247 - 3,661,373 (+)EnsemblmRatBN7.2 Ensembl
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
631551Vetf1Vascular elastic tissue fragility QTL 150.0001aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)522822265904428Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000098492
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl53,661,247 - 3,661,373 (+)Ensembl
Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-42291 BioCyc
Ensembl Genes ENSRNOG00000067185 Ensembl, ENTREZGENE
NCBI Gene LOC120103364 ENTREZGENE
PhenoGen LOC120103364 PhenoGen
RatGTEx ENSRNOG00000067185 RatGTEx


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-05-26 LOC120103364  U2 spliceosomal RNA  U2  U2 spliceosomal RNA  Data merged from RGD:150343472 737654 PROVISIONAL
2021-08-31 U2  U2 spliceosomal RNA      Symbol and Name status set to provisional 45752 PROVISIONAL
2021-01-26 LOC120103364  U2 spliceosomal RNA      Symbol and Name status set to provisional 70820 PROVISIONAL