Snrk-ps2 (SNF related kinase, pseudogene 2) - Rat Genome Database

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Gene: Snrk-ps2 (SNF related kinase, pseudogene 2) Rattus norvegicus
Analyze
Symbol: Snrk-ps2
Name: SNF related kinase, pseudogene 2
RGD ID: 40940844
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC120099229; SNF-related serine/threonine-protein kinase-like
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X86,153,995 - 86,157,512 (+)NCBIGRCr8
mRatBN7.2X81,950,267 - 81,954,558 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic MapXq31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in Snrk-ps2
32 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat


Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1794 BioCyc
NCBI Gene LOC120099229 ENTREZGENE
PhenoGen Snrk-ps2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Snrk-ps2  SNF related kinase, pseudogene 2  LOC120099229  SNF-related serine/threonine-protein kinase-like  Symbol and Name Changed 1299863 APPROVED
2021-01-26 LOC120099229  SNF-related serine/threonine-protein kinase-like      Symbol and Name status set to provisional 70820 PROVISIONAL