LOC119866362 (chymotrypsin-like elastase family member 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: LOC119866362 (chymotrypsin-like elastase family member 1) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC119866362 (Ensembl: CELA1)
Name: chymotrypsin-like elastase family member 1 (Ensembl:chymotrypsin like elastase 1)
RGD ID: 40919701
Description: ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN digestive system development (inferred); elastin catabolic process (inferred); exocrine pancreas development (inferred); FOUND IN extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ROS_Cfam_1.0273,536,170 - 3,554,838 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl273,536,169 - 3,605,707 (+)EnsemblROS_Cfam_1.0 Ensembl


References

Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038438148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAUVH010000362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00845026580   ⟹   ENSCAFP00845020951
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl273,536,169 - 3,593,755 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845026614   ⟹   ENSCAFP00845020972
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl273,536,169 - 3,593,755 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845026672   ⟹   ENSCAFP00845021018
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl273,536,852 - 3,554,802 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845026699   ⟹   ENSCAFP00845021038
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl273,587,178 - 3,605,707 (+)Ensembl
RefSeq Acc Id: XM_038438148   ⟹   XP_038294076
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0273,536,170 - 3,554,838 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038294076 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00845020951.1
  ENSCAFP00845020972.1
  ENSCAFP00845021018
  ENSCAFP00845021018.1
  ENSCAFP00845021038.1
RefSeq Acc Id: XP_038294076   ⟸   XM_038438148
- UniProtKB: Q867B0 (UniProtKB/Swiss-Prot),   A0A8C0PRK1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845020972   ⟸   ENSCAFT00845026614
RefSeq Acc Id: ENSCAFP00845020951   ⟸   ENSCAFT00845026580
RefSeq Acc Id: ENSCAFP00845021038   ⟸   ENSCAFT00845026699
RefSeq Acc Id: ENSCAFP00845021018   ⟸   ENSCAFT00845026672
Protein Domains
Peptidase S1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845014847 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845026580.1 UniProtKB/TrEMBL
  ENSCAFT00845026614.1 UniProtKB/TrEMBL
  ENSCAFT00845026672 ENTREZGENE
  ENSCAFT00845026672.1 UniProtKB/TrEMBL
  ENSCAFT00845026699.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
InterPro Peptidase_S1_PA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene LOC119866362 ENTREZGENE
PANTHER CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE TRYPSIN_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Tryp_SPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A0A8C0PRK1 ENTREZGENE
  A0A8I3NL56_CANLF UniProtKB/TrEMBL
  A0A8I3NVA0_CANLF UniProtKB/TrEMBL
  A0A8I3RYE5_CANLF UniProtKB/TrEMBL
  CELA1_CANLF UniProtKB/Swiss-Prot, ENTREZGENE