ASB1 (ankyrin repeat and SOCS box containing 1) - Rat Genome Database

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Gene: ASB1 (ankyrin repeat and SOCS box containing 1) Canis lupus familiaris
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Symbol: ASB1
Name: ankyrin repeat and SOCS box containing 1
RGD ID: 40918749
Description: ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male genitalia development (ortholog); ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); chromosome 2q37 deletion syndrome (ortholog); D-2-hydroxyglutaric aciduria 1 (ortholog); FOUND IN ubiquitin ligase complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat and SOCS box protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha2549,349,423 - 49,370,853 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02549,239,887 - 49,261,315 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2549,217,966 - 49,255,992 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12549,114,892 - 49,211,423 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02548,903,641 - 48,925,039 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02549,135,809 - 49,157,238 (+)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
ASB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha2549,349,423 - 49,370,853 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02549,239,887 - 49,261,315 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2549,217,966 - 49,255,992 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12549,114,892 - 49,211,423 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02548,903,641 - 48,925,039 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02549,135,809 - 49,157,238 (+)NCBIUU_Cfam_GSD_1.0
ASB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382238,426,927 - 238,452,250 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2238,426,742 - 238,452,250 (+)EnsemblGRCh38hg38GRCh38
GRCh372239,335,568 - 239,360,891 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362239,000,365 - 239,025,630 (+)NCBINCBI36Build 36hg18NCBI36
Build 342239,117,625 - 239,142,890NCBI
Celera2233,048,109 - 233,073,377 (+)NCBICelera
Cytogenetic Map2q37.3NCBI
HuRef2231,126,671 - 231,151,945 (+)NCBIHuRef
CHM1_12239,341,851 - 239,367,116 (+)NCBICHM1_1
T2T-CHM13v2.02238,917,065 - 238,942,362 (+)NCBIT2T-CHM13v2.0
Asb1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39191,467,725 - 91,487,312 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl191,468,266 - 91,487,311 (+)EnsemblGRCm39 Ensembl
GRCm38191,540,001 - 91,559,590 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl191,540,544 - 91,559,589 (+)EnsemblGRCm38mm10GRCm38
MGSCv37193,437,142 - 93,456,167 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36193,370,971 - 93,390,034 (+)NCBIMGSCv36mm8
Celera194,477,061 - 94,496,069 (+)NCBICelera
Cytogenetic Map1DNCBI
cM Map146.19NCBI
Asb1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8999,566,852 - 99,588,321 (+)NCBIGRCr8
mRatBN7.2992,120,332 - 92,140,790 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl992,120,306 - 92,136,376 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx9100,547,118 - 100,562,967 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09105,682,879 - 105,698,728 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.09104,046,687 - 104,062,664 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0998,668,231 - 98,689,471 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl998,668,231 - 98,684,900 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0998,344,295 - 98,364,916 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4990,758,693 - 90,774,541 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1990,963,353 - 90,979,013 (+)NCBI
Celera989,661,506 - 89,676,975 (+)NCBICelera
Cytogenetic Map9q36NCBI
Asb1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555422,243,381 - 2,255,747 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555422,243,381 - 2,255,747 (-)NCBIChiLan1.0ChiLan1.0
ASB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213141,066,796 - 141,093,593 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B141,083,318 - 141,108,561 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B125,664,934 - 125,690,175 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B244,508,295 - 244,533,471 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B244,508,295 - 244,527,771 (+)Ensemblpanpan1.1panPan2
Asb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303190,845,532 - 190,860,128 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493652584,907 - 97,210 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493652579,568 - 94,147 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15137,931,774 - 137,952,046 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115137,931,419 - 137,952,050 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215152,382,932 - 152,403,282 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ASB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110124,456,993 - 124,479,904 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10124,456,492 - 124,478,600 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604074,937,061 - 74,964,236 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asb1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248473,477,516 - 3,491,451 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248473,477,499 - 3,489,427 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCAFT00845053540   ⟹   ENSCAFP00845042072
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2549,217,966 - 49,255,992 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845053562   ⟹   ENSCAFP00845042087
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2549,239,546 - 49,255,992 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845053584   ⟹   ENSCAFP00845042106
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2549,239,874 - 49,255,992 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845053597   ⟹   ENSCAFP00845042116
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2549,241,605 - 49,255,992 (+)Ensembl
RefSeq Acc Id: XM_038435947   ⟹   XP_038291875
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02549,239,887 - 49,261,308 (+)NCBI
RefSeq Acc Id: XM_038510869   ⟹   XP_038366797
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12549,130,533 - 49,211,423 (+)NCBI
RefSeq Acc Id: XR_005302068
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02549,239,887 - 49,261,308 (+)NCBI
RefSeq Acc Id: XR_005302069
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02549,239,887 - 49,261,315 (+)NCBI
RefSeq Acc Id: XR_005314459
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2549,349,423 - 49,370,853 (+)NCBI
RefSeq Acc Id: XR_005345053
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12549,114,892 - 49,136,321 (+)NCBI
RefSeq Acc Id: XR_005378917
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02549,135,809 - 49,157,238 (+)NCBI
RefSeq Acc Id: XR_005412738
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02548,903,641 - 48,925,039 (+)NCBI
RefSeq Acc Id: XP_038366797   ⟸   XM_038510869
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038291875   ⟸   XM_038435947
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NGL2 (UniProtKB/TrEMBL),   A0A8I3QAT5 (UniProtKB/TrEMBL),   A0A8P0NXY6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845042072   ⟸   ENSCAFT00845053540
Ensembl Acc Id: ENSCAFP00845042106   ⟸   ENSCAFT00845053584
Ensembl Acc Id: ENSCAFP00845042116   ⟸   ENSCAFT00845053597
Ensembl Acc Id: ENSCAFP00845042087   ⟸   ENSCAFT00845053562
Protein Domains
SOCS box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000012461 UniProtKB/TrEMBL
  ENSCAFG00030015314 UniProtKB/TrEMBL
  ENSCAFG00040021492 UniProtKB/TrEMBL
  ENSCAFG00845030187 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000091208.2 UniProtKB/TrEMBL
  ENSCAFT00030028275.1 UniProtKB/TrEMBL
  ENSCAFT00030028346.1 UniProtKB/TrEMBL
  ENSCAFT00040039886.1 UniProtKB/TrEMBL
  ENSCAFT00040039950.1 UniProtKB/TrEMBL
  ENSCAFT00040039985.1 UniProtKB/TrEMBL
  ENSCAFT00040040033.1 UniProtKB/TrEMBL
  ENSCAFT00845053540.1 UniProtKB/TrEMBL
  ENSCAFT00845053562.1 UniProtKB/TrEMBL
  ENSCAFT00845053584.1 UniProtKB/TrEMBL
  ENSCAFT00845053597 ENTREZGENE
  ENSCAFT00845053597.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
  SOCS box UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  ASB1_SOCS UniProtKB/TrEMBL
  CRL2_E3_Ligase_Fem-1 UniProtKB/TrEMBL
  SOCS_box UniProtKB/TrEMBL
  SOCS_box-like_dom_sf UniProtKB/TrEMBL
NCBI Gene ASB1 ENTREZGENE
PANTHER ANKYRIN REPEAT AND SOCS BOX PROTEIN 1 UniProtKB/TrEMBL
  ANKYRIN REPEAT CONTAINING UniProtKB/TrEMBL
Pfam Ank UniProtKB/TrEMBL
  Ank_2 UniProtKB/TrEMBL
  SOCS_box UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  SOCS UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  SOCS UniProtKB/TrEMBL
  SOCS_box UniProtKB/TrEMBL
Superfamily-SCOP SSF158235 UniProtKB/TrEMBL
  SSF48403 UniProtKB/TrEMBL
UniProt A0A8C0NGL2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TE08_CANLF UniProtKB/TrEMBL
  A0A8C0TEH6_CANLF UniProtKB/TrEMBL
  A0A8C0THW4_CANLF UniProtKB/TrEMBL
  A0A8I3Q8V6_CANLF UniProtKB/TrEMBL
  A0A8I3Q9U6_CANLF UniProtKB/TrEMBL
  A0A8I3QAT5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QXC6_CANLF UniProtKB/TrEMBL
  A0A8P0NXY6 ENTREZGENE, UniProtKB/TrEMBL