CDC42 (cell division cycle 42) - Rat Genome Database

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Gene: CDC42 (cell division cycle 42) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: CDC42
Name: cell division cycle 42
RGD ID: 40912653
Description: ENCODES a protein that exhibits G protein activity (inferred); GTP binding (inferred); GTPase activity (inferred); INVOLVED IN actin filament organization (ortholog); cell junction assembly (ortholog); dendritic spine morphogenesis (ortholog); FOUND IN membrane (ortholog); midbody (ortholog); mitotic spindle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CDC42 GTP-binding protein; cell division control protein 42 homolog
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha273,655,029 - 73,702,286 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0277,709,198 - 77,756,757 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl277,709,738 - 77,756,701 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1274,529,704 - 74,576,899 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0275,538,517 - 75,585,919 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0276,542,375 - 76,589,970 (-)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038463312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038470811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038470812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038531674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038531675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038659984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038659985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z49944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00845001325   ⟹   ENSCAFP00845001022
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl277,709,738 - 77,756,675 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845001333   ⟹   ENSCAFP00845001027
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl277,711,899 - 77,756,679 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845001339   ⟹   ENSCAFP00845001032
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl277,715,616 - 77,756,701 (-)Ensembl
RefSeq Acc Id: XM_038463312   ⟹   XP_038319240
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha273,655,029 - 73,702,286 (-)NCBI
RefSeq Acc Id: XM_038463314   ⟹   XP_038319242
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha273,657,846 - 73,702,286 (-)NCBI
RefSeq Acc Id: XM_038470811   ⟹   XP_038326739
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1274,529,704 - 74,576,899 (-)NCBI
RefSeq Acc Id: XM_038470812   ⟹   XP_038326740
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1274,532,519 - 74,576,899 (-)NCBI
RefSeq Acc Id: XM_038531674   ⟹   XP_038387602
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0276,542,375 - 76,589,970 (-)NCBI
RefSeq Acc Id: XM_038531675   ⟹   XP_038387603
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0276,545,193 - 76,589,970 (-)NCBI
RefSeq Acc Id: XM_038595906   ⟹   XP_038451834
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0275,538,517 - 75,585,919 (-)NCBI
RefSeq Acc Id: XM_038595907   ⟹   XP_038451835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0275,541,336 - 75,585,919 (-)NCBI
RefSeq Acc Id: XM_038659984   ⟹   XP_038515912
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0277,709,198 - 77,756,757 (-)NCBI
RefSeq Acc Id: XM_038659985   ⟹   XP_038515913
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0277,712,026 - 77,756,757 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038326739   ⟸   XM_038470811
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038326740   ⟸   XM_038470812
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038451834   ⟸   XM_038595906
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038451835   ⟸   XM_038595907
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038515912   ⟸   XM_038659984
- Peptide Label: isoform X1
- UniProtKB: P60952 (UniProtKB/Swiss-Prot),   A0A8C0NDL5 (UniProtKB/TrEMBL),   A0A8I3P5T9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038515913   ⟸   XM_038659985
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NDL5 (UniProtKB/TrEMBL),   A0A8I3P5T9 (UniProtKB/TrEMBL),   A0A8C0L7Q8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319240   ⟸   XM_038463312
- Peptide Label: isoform X1
- UniProtKB: P60952 (UniProtKB/Swiss-Prot),   A0A8C0NDL5 (UniProtKB/TrEMBL),   A0A8I3P5T9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319242   ⟸   XM_038463314
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NDL5 (UniProtKB/TrEMBL),   A0A8I3P5T9 (UniProtKB/TrEMBL),   A0A8C0L7Q8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038387602   ⟸   XM_038531674
- Peptide Label: isoform X1
- UniProtKB: P60952 (UniProtKB/Swiss-Prot),   A0A8C0NDL5 (UniProtKB/TrEMBL),   A0A8I3P5T9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038387603   ⟸   XM_038531675
- Peptide Label: isoform X2
- UniProtKB: A0A8C0L7Q8 (UniProtKB/TrEMBL),   A0A8C0NDL5 (UniProtKB/TrEMBL),   A0A8I3P5T9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845001032   ⟸   ENSCAFT00845001339
RefSeq Acc Id: ENSCAFP00845001022   ⟸   ENSCAFT00845001325
RefSeq Acc Id: ENSCAFP00845001027   ⟸   ENSCAFT00845001333


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007554 UniProtKB/TrEMBL
  ENSCAFG00000014707 UniProtKB/Swiss-Prot
  ENSCAFG00030002163 UniProtKB/Swiss-Prot
  ENSCAFG00030013659 UniProtKB/TrEMBL
  ENSCAFG00040001840 UniProtKB/Swiss-Prot
  ENSCAFG00040002443 UniProtKB/Swiss-Prot
  ENSCAFG00040021272 UniProtKB/TrEMBL
  ENSCAFG00805001040 UniProtKB/Swiss-Prot
  ENSCAFG00845000796 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSCAFG00845018261 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000012099.4 UniProtKB/TrEMBL
  ENSCAFT00000023350.6 UniProtKB/Swiss-Prot
  ENSCAFT00000023351.5 UniProtKB/Swiss-Prot
  ENSCAFT00030003966.1 UniProtKB/Swiss-Prot
  ENSCAFT00030003973.1 UniProtKB/Swiss-Prot
  ENSCAFT00030025228.1 UniProtKB/TrEMBL
  ENSCAFT00040003456.1 UniProtKB/Swiss-Prot
  ENSCAFT00040004651.1 UniProtKB/Swiss-Prot
  ENSCAFT00040004656.1 UniProtKB/Swiss-Prot
  ENSCAFT00040039469.1 UniProtKB/TrEMBL
  ENSCAFT00805001895 UniProtKB/Swiss-Prot
  ENSCAFT00845001325 ENTREZGENE
  ENSCAFT00845001325.1 UniProtKB/Swiss-Prot
  ENSCAFT00845001333 ENTREZGENE
  ENSCAFT00845001333.1 UniProtKB/Swiss-Prot
  ENSCAFT00845001339.1 UniProtKB/TrEMBL
  ENSCAFT00845032290.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
InterPro Cdc42 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Small_GTPase_Rho UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene CDC42 ENTREZGENE
PANTHER CDC42 HOMOLOG UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  CELL DIVISION CONTROL PROTEIN 42 HOMOLOG UniProtKB/TrEMBL
  PTHR24072 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
Pfam Ras UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS RASTRNSFRMNG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART RAB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP P-loop containing nucleoside triphosphate hydrolases UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8C0L7Q8 ENTREZGENE
  A0A8C0NDL5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MX28_CANLF UniProtKB/TrEMBL
  A0A8I3P5T9 ENTREZGENE, UniProtKB/TrEMBL
  CDC42_CANLF UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary P21181 UniProtKB/Swiss-Prot
  P25763 UniProtKB/Swiss-Prot