NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit) - Rat Genome Database

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Gene: NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit) Canis lupus familiaris
Analyze
Symbol: NAA50
Name: N-alpha-acetyltransferase 50, NatE catalytic subunit
RGD ID: 40907277
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); acyltransferase activity, transferring groups other than amino-acyl groups (inferred); histone H4 acetyltransferase activity (inferred); INVOLVED IN chromatin remodeling (inferred); establishment of mitotic sister chromatid cohesion (inferred); mitotic sister chromatid cohesion (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); NatA complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: N-alpha-acetyltransferase 50
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3318,111,480 - 18,139,497 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03318,253,597 - 18,281,699 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3318,253,597 - 18,281,720 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13318,057,364 - 18,085,408 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03318,104,745 - 18,132,483 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03318,655,841 - 18,683,924 (-)NCBIUU_Cfam_GSD_1.0


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)
NatA complex  (IEA)
nucleolus  (IEA)
nucleus  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NAA50
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3318,111,480 - 18,139,497 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03318,253,597 - 18,281,699 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3318,253,597 - 18,281,720 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13318,057,364 - 18,085,408 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03318,104,745 - 18,132,483 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03318,655,841 - 18,683,924 (-)NCBIUU_Cfam_GSD_1.0
NAA50
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383113,716,458 - 113,746,249 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3113,716,458 - 113,746,300 (-)EnsemblGRCh38hg38GRCh38
GRCh373113,435,305 - 113,465,096 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363114,920,531 - 114,947,786 (-)NCBINCBI36Build 36hg18NCBI36
Build 343114,920,530 - 114,947,786NCBI
Celera3111,846,332 - 111,873,586 (-)NCBICelera
Cytogenetic Map3q13.31NCBI
HuRef3110,810,207 - 110,840,018 (-)NCBIHuRef
CHM1_13113,398,653 - 113,428,466 (-)NCBICHM1_1
T2T-CHM13v2.03116,437,658 - 116,467,450 (-)NCBIT2T-CHM13v2.0
Naa50
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391643,960,154 - 43,983,825 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1643,960,193 - 43,983,729 (+)EnsemblGRCm39 Ensembl
GRCm381644,139,791 - 44,163,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1644,139,830 - 44,163,366 (+)EnsemblGRCm38mm10GRCm38
MGSCv371644,139,922 - 44,163,477 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361644,059,141 - 44,082,696 (+)NCBIMGSCv36mm8
Celera1644,497,008 - 44,520,827 (+)NCBICelera
Cytogenetic Map16B4NCBI
cM Map1628.47NCBI
Naa50
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81170,044,281 - 70,066,754 (-)NCBIGRCr8
mRatBN7.21156,538,366 - 56,560,842 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,538,366 - 56,560,842 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1165,351,540 - 65,374,017 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01158,013,772 - 58,036,254 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01157,062,496 - 57,085,000 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01161,508,162 - 61,530,830 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,462,994 - 61,530,837 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,466,962 - 61,470,348 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01165,614,950 - 65,637,732 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41158,103,982 - 58,126,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11158,165,242 - 58,184,158 (-)NCBI
Celera1156,091,522 - 56,113,995 (-)NCBICelera
Cytogenetic Map11q21NCBI
Naa50
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542713,845,806 - 13,868,323 (-)NCBIChiLan1.0ChiLan1.0
NAA50
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22111,714,482 - 111,741,982 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13111,719,261 - 111,746,737 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03110,860,595 - 110,888,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13117,781,455 - 117,808,913 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3117,781,455 - 117,808,913 (-)Ensemblpanpan1.1panPan2
Naa50
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602136,264,699 - 136,285,768 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365361,221,080 - 1,257,263 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365361,221,080 - 1,257,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA50
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13146,193,231 - 146,222,133 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113146,193,186 - 146,217,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,778,467 - 155,802,802 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA50
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12267,113,126 - 67,142,391 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2267,113,123 - 67,139,627 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604199,328,044 - 99,356,888 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Naa50
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473134,781,157 - 34,808,265 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473134,781,120 - 34,808,863 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038444968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038444969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038519261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038582844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038582845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038647262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005306347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005306348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005317206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005349427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005349428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005383331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005383332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00845053742   ⟹   ENSCAFP00845042232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3318,253,597 - 18,281,720 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845053749   ⟹   ENSCAFP00845042238
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3318,253,597 - 18,281,720 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845053757   ⟹   ENSCAFP00845042245
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3318,256,464 - 18,281,720 (-)Ensembl
RefSeq Acc Id: XM_038444968   ⟹   XP_038300896
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03318,253,597 - 18,281,699 (-)NCBI
RefSeq Acc Id: XM_038444969   ⟹   XP_038300897
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03318,253,597 - 18,281,688 (-)NCBI
RefSeq Acc Id: XM_038462396   ⟹   XP_038318324
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3318,111,480 - 18,139,497 (-)NCBI
RefSeq Acc Id: XM_038462397   ⟹   XP_038318325
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3318,111,480 - 18,139,482 (-)NCBI
RefSeq Acc Id: XM_038519260   ⟹   XP_038375188
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13318,057,364 - 18,085,408 (-)NCBI
RefSeq Acc Id: XM_038519261   ⟹   XP_038375189
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13318,057,364 - 18,085,397 (-)NCBI
RefSeq Acc Id: XM_038582844   ⟹   XP_038438772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03318,655,841 - 18,683,924 (-)NCBI
RefSeq Acc Id: XM_038582845   ⟹   XP_038438773
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03318,655,841 - 18,683,913 (-)NCBI
RefSeq Acc Id: XM_038647261   ⟹   XP_038503189
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03318,104,745 - 18,132,483 (-)NCBI
RefSeq Acc Id: XM_038647262   ⟹   XP_038503190
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03318,104,745 - 18,132,472 (-)NCBI
RefSeq Acc Id: XR_005306347
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03318,253,597 - 18,280,950 (-)NCBI
RefSeq Acc Id: XR_005306348
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03318,253,597 - 18,280,260 (-)NCBI
RefSeq Acc Id: XR_005317206
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3318,111,480 - 18,138,119 (-)NCBI
RefSeq Acc Id: XR_005349427
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13318,057,364 - 18,084,683 (-)NCBI
RefSeq Acc Id: XR_005349428
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13318,057,364 - 18,083,999 (-)NCBI
RefSeq Acc Id: XR_005383331
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03318,655,841 - 18,683,187 (-)NCBI
RefSeq Acc Id: XR_005383332
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03318,655,841 - 18,682,503 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038375188   ⟸   XM_038519260
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038375189   ⟸   XM_038519261
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503189   ⟸   XM_038647261
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503190   ⟸   XM_038647262
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038300896   ⟸   XM_038444968
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RT68 (UniProtKB/TrEMBL),   A0A8C0JZZ6 (UniProtKB/TrEMBL),   A0A8I3QMS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038300897   ⟸   XM_038444969
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038318324   ⟸   XM_038462396
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RT68 (UniProtKB/TrEMBL),   A0A8C0JZZ6 (UniProtKB/TrEMBL),   A0A8I3QMS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318325   ⟸   XM_038462397
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038438772   ⟸   XM_038582844
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZZ6 (UniProtKB/TrEMBL),   A0A8C0RT68 (UniProtKB/TrEMBL),   A0A8I3QMS3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038438773   ⟸   XM_038582845
- Peptide Label: isoform X2
RefSeq Acc Id: ENSCAFP00845042245   ⟸   ENSCAFT00845053757
RefSeq Acc Id: ENSCAFP00845042238   ⟸   ENSCAFT00845053749
RefSeq Acc Id: ENSCAFP00845042232   ⟸   ENSCAFT00845053742
Protein Domains
N-acetyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000056148 UniProtKB/TrEMBL
  ENSCAFG00030024907 UniProtKB/TrEMBL
  ENSCAFG00040024190 UniProtKB/TrEMBL
  ENSCAFG00845030284 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000094098.1 UniProtKB/TrEMBL
  ENSCAFT00000100385.1 UniProtKB/TrEMBL
  ENSCAFT00000110001.1 UniProtKB/TrEMBL
  ENSCAFT00030045941.1 UniProtKB/TrEMBL
  ENSCAFT00030045950.1 UniProtKB/TrEMBL
  ENSCAFT00030045965.1 UniProtKB/TrEMBL
  ENSCAFT00040045097.1 UniProtKB/TrEMBL
  ENSCAFT00040045103.1 UniProtKB/TrEMBL
  ENSCAFT00040045130.1 UniProtKB/TrEMBL
  ENSCAFT00845053742 ENTREZGENE
  ENSCAFT00845053742.1 UniProtKB/TrEMBL
  ENSCAFT00845053749.1 UniProtKB/TrEMBL
  ENSCAFT00845053757.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
NCBI Gene NAA50 ENTREZGENE
PANTHER N-ALPHA-ACETYLTRANSFERASE UniProtKB/TrEMBL
  N-ALPHA-ACETYLTRANSFERASE 50 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A8C0JZZ6 ENTREZGENE
  A0A8C0PH14_CANLF UniProtKB/TrEMBL
  A0A8C0PLY2_CANLF UniProtKB/TrEMBL
  A0A8C0RT68 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q334_CANLF UniProtKB/TrEMBL
  A0A8I3QA31_CANLF UniProtKB/TrEMBL
  A0A8I3QMS3 ENTREZGENE, UniProtKB/TrEMBL