Gm14607 (predicted gene 14607) - Rat Genome Database

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Gene: Gm14607 (predicted gene 14607) Mus musculus
Analyze
Symbol: Gm14607
Name: predicted gene 14607
RGD ID: 3993258
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Rpl9  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X51,967,116 - 51,967,603 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX51,967,120 - 51,967,610 (+)EnsemblGRCm39 Ensembl
GRCm38X52,878,239 - 52,878,726 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX52,878,243 - 52,878,733 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X50,231,416 - 50,231,903 (+)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX40,293,593 - 40,294,080 (+)NCBICelera
Cytogenetic MapXA5NCBI
cM MapX29.26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm14607
12 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:211
Count of miRNA genes:200
Interacting mature miRNAs:207
Transcripts:ENSMUST00000119119
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13208553Wght11_mweight 11 (mouse)X1186623959045360Mouse
1300853Aggr2_maggression 2 (mouse)Not determinedX4907116752259196Mouse
27226780Femd12_mfemur midshaft diameter 12, 16 week (mouse)X3466365356845360Mouse
1301212Bw19_mbody weight QTL 19 (mouse)Not determinedX4637692052412327Mouse
1301278Bdln1_mbody length 1 (mouse)Not determinedX4170210675702218Mouse
4142200Rtwq1_mreduced testis weight QTL 1 (mouse)Not determined4147706075477203Mouse
27226750Femd9_mfemur midshaft diameter 9, 10 week (mouse)X3333746355845360Mouse
13208567Bmiq12_mbody mass index QTL 12 (mouse)X3526365377043606Mouse
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
1301009Pbwg7_mpostnatal body weight growth 7 (mouse)Not determinedX3911371473113814Mouse
4141565Pbwg21_mpostnatal body weight growth 21 (mouse)Not determinedX3911371473113814Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
1300794Spha2_msperm head anomaly 2 (mouse)Not determinedX3992149886260137Mouse
1300702Fcsa4_mfemoral cross-sectional area 4 (mouse)Not determinedX4602744480027567Mouse
1301351Obq6_mobesity QTL 6 (mouse)Not determinedX5077237570434751Mouse
13208557Lgth13_mbody length 13 (mouse)X1186623959045360Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NG_021131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BX664736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000119119
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX51,967,120 - 51,967,610 (+)Ensembl
GRCm38.p6 EnsemblX52,878,243 - 52,878,733 (+)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000082887 Ensembl, ENTREZGENE
MGD MGI:3710229 ENTREZGENE
NCBI Gene 100422782 ENTREZGENE
PhenoGen Gm14607 PhenoGen