Zfp999 (zinc finger protein 999) - Rat Genome Database

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Gene: Zfp999 (zinc finger protein 999) Mus musculus
Analyze
Symbol: Zfp999
Name: zinc finger protein 999
RGD ID: 3949592
MGI Page MGI
Description: Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Apr 2022]
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ENSMUSG00000074840; Gm10772; zinc finger protein 431-like
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391366,374,938 - 66,391,905 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1366,375,133 - 66,375,387 (-)EnsemblGRCm39 Ensembl
GRCm381366,227,124 - 66,236,670 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1366,227,319 - 66,227,573 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map13B3NCBI
cM Map1334.51NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9630514   PMID:14610273   PMID:21873635  


Genomics

Variants

.
Variants in Zfp999
276 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884393Humsd7_mhumerus midshaft diameter 7, 16 week (mouse)13395000076048119Mouse
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
4142009Pregq3_mpregnancy QTL 3 (mouse)Not determined132061551272385189Mouse
1301299Sluc23_msusceptibility to lung cancer 23 (mouse)Not determined133492194368922081Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
1357587Pfat3_mpredicted fat percentage 3 (mouse)Not determined133610153070101640Mouse
1301734Acsns2_mAngiostrongylus costaricensis nematode susceptibility 2 (mouse)Not determined133610153070101640Mouse
1300561Heal7_mwound healing/regeneration 7 (mouse)Not determined133614482070144904Mouse
1300862Cfbw5_mcystic fibrosis body weight 5 (mouse)Not determined133872035872720517Mouse
1300985Bmd13_mbone mineral density 13 (mouse)Not determined133962924973629397Mouse
1302157Bwem2_mbody weight day 30 males 2 (mouse)Not determined133962924973629397Mouse
1301801Cpfd5_mcerebellum pattern fissures (mouse)Not determined133962924973629397Mouse
15039353Nmrs35_mNAFLD-associated magnetic resonance shift 35 (mouse)134058825374588253Mouse
1300668Pas10_mpulmonary adenoma susceptibility 10 (mouse)Not determined134148904275489158Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
26884396Humsd4_mhumerus midshaft diameter 4, 10 week (mouse)134785347673148119Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse
1357563Bmch6_mbone mechanical trait 6 (mouse)Not determined135538498089385140Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
1558850Sgp3_mserum gp70 production 3 (mouse)Not determined135647045676971314Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1357553Cia28_mcollagen induced arthritis 28 (mouse)Not determined135662924996239162Mouse
10412163Wra1_mwheel running activity 1 (mouse)Not determined135913260093132738Mouse
1300941Skl6_mskeletal size (tail length) 6 (mouse)Not determined136425082198250945Mouse
1301949Skull20_mskull morphology 20 (mouse)Not determined136425082198250945Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000167981   ⟹   ENSMUSP00000126511
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1366,375,133 - 66,375,387 (-)Ensembl
GRCm38.p6 Ensembl1366,227,319 - 66,227,573 (-)Ensembl
RefSeq Acc Id: XM_036158263   ⟹   XP_036014156
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391366,374,938 - 66,391,905 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_036014156 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAA31427 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000126511.3
Reference Protein Sequences
RefSeq Acc Id: ENSMUSP00000126511   ⟸   ENSMUST00000167981
RefSeq Acc Id: XP_036014156   ⟸   XM_036158263
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F7AIG4-F1-model_v2 AlphaFold F7AIG4 1-85 view protein structure


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000091347 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000167981.3 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
MGD MGI:3704404 ENTREZGENE
NCBI Gene Gm10772 ENTREZGENE
PANTHER RCG31665-RELATED UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/TrEMBL
Pfam zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PhenoGen Zfp999 PhenoGen
PRINTS ZINCFINGER UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF57667 UniProtKB/TrEMBL
UniProt F7AIG4_MOUSE UniProtKB/TrEMBL
  O88264_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-08 Zfp999  zinc finger protein 999  Gm10772  predicted gene 10772  Symbol and/or name updated 27372883 PROVISIONAL